RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 RD3LP0DJH9 198 aa19.28■□□□□ 0.68
RFFL-206ENST00000447669 PSMB8P28062 276 aa19.28■□□□□ 0.68
RFFL-206ENST00000447669 EEF1AKMT3Q96AZ1 226 aa19.28■□□□□ 0.68
RFFL-206ENST00000447669 ZNF414Q96IQ9 312 aa19.28■□□□□ 0.68
RFFL-206ENST00000447669 PBDC1Q9BVG4 233 aa19.28■□□□□ 0.68
RFFL-206ENST00000447669 MAP1LC3BQ9GZQ8 125 aa19.28■□□□□ 0.68
RFFL-206ENST00000447669 A0A1W2PPV4 95 aa19.27■□□□□ 0.68
RFFL-206ENST00000447669 FAM223BA6NKX1 122 aa19.27■□□□□ 0.68
RFFL-206ENST00000447669 RNASE1P07998 156 aaKnown RBP19.27■□□□□ 0.68
RFFL-206ENST00000447669 OR5G3P0C626 314 aa19.27■□□□□ 0.68
RFFL-206ENST00000447669 LYZP61626 148 aa19.27■□□□□ 0.68
RFFL-206ENST00000447669 SELENOTP62341 195 aa19.27■□□□□ 0.68
RFFL-206ENST00000447669 FAM223AQ8IWN6 122 aa19.27■□□□□ 0.68
RFFL-206ENST00000447669 TMEM231Q9H6L2 316 aa19.27■□□□□ 0.68
RFFL-206ENST00000447669 ZNF580Q9UK33 172 aa19.27■□□□□ 0.68
RFFL-206ENST00000447669 TRAV5A0A0B4J249 113 aa19.27■□□□□ 0.67
RFFL-206ENST00000447669 RPLP1P05386 114 aaKnown RBP19.27■□□□□ 0.67
RFFL-206ENST00000447669 MBD3L1Q8WWY6 194 aa19.27■□□□□ 0.67
RFFL-206ENST00000447669 GNB4Q9HAV0 340 aa19.27■□□□□ 0.67
RFFL-206ENST00000447669 CTXND1A0A1B0GTU2 59 aa19.26■□□□□ 0.67
RFFL-206ENST00000447669 ANKRD34BA5PLL1 514 aa19.26■□□□□ 0.67
RFFL-206ENST00000447669 SEC14L6B5MCN3 397 aa19.26■□□□□ 0.67
RFFL-206ENST00000447669 DNAJC4Q9NNZ3 241 aa19.26■□□□□ 0.67
RFFL-206ENST00000447669 H3BUA1 57 aa19.25■□□□□ 0.67
RFFL-206ENST00000447669 OR51G1Q8NGK1 321 aa19.25■□□□□ 0.67
RFFL-206ENST00000447669 MARC2Q969Z3 335 aa19.25■□□□□ 0.67
RFFL-206ENST00000447669 COX7A2P2O60397 106 aa19.25■□□□□ 0.67
RFFL-206ENST00000447669 TSPAN9O75954 239 aa19.25■□□□□ 0.67
RFFL-206ENST00000447669 IQCF2Q8IXL9 164 aa19.25■□□□□ 0.67
RFFL-206ENST00000447669 TRBV7-1A0A0A6YYK4 115 aa19.24■□□□□ 0.67
RFFL-206ENST00000447669 CRYBA1P05813 215 aa19.24■□□□□ 0.67
RFFL-206ENST00000447669 KIAA0141Q14154 515 aaPredicted RBP19.24■□□□□ 0.67
RFFL-206ENST00000447669 GATAD1Q8WUU5 269 aa19.24■□□□□ 0.67
RFFL-206ENST00000447669 TXN2Q99757 166 aa19.24■□□□□ 0.67
RFFL-206ENST00000447669 TRAV30A0A087WSZ9 112 aa19.24■□□□□ 0.67
RFFL-206ENST00000447669 NUPL2O15504 423 aaKnown RBP19.24■□□□□ 0.67
RFFL-206ENST00000447669 CRLF1O75462 422 aa19.24■□□□□ 0.67
RFFL-206ENST00000447669 TOMM40O96008 361 aa19.24■□□□□ 0.67
RFFL-206ENST00000447669 IL4P05112 153 aa19.24■□□□□ 0.67
RFFL-206ENST00000447669 FCGR2BP31994 310 aaPredicted RBP19.24■□□□□ 0.67
RFFL-206ENST00000447669 C10orf113Q5VZT2 155 aa19.24■□□□□ 0.67
RFFL-206ENST00000447669 LEMD1Q68G75 181 aa19.24■□□□□ 0.67
RFFL-206ENST00000447669 ZNF491Q8N8L2 437 aa19.24■□□□□ 0.67
RFFL-206ENST00000447669 MED9Q9NWA0 146 aa19.24■□□□□ 0.67
RFFL-206ENST00000447669 BRI3O95415 125 aa19.23■□□□□ 0.67
RFFL-206ENST00000447669 RHOBP62745 196 aa19.23■□□□□ 0.67
RFFL-206ENST00000447669 TEX38Q6PEX7 206 aa19.23■□□□□ 0.67
RFFL-206ENST00000447669 RARRES2Q99969 163 aa19.23■□□□□ 0.67
RFFL-206ENST00000447669 FUT9Q9Y231 359 aa19.23■□□□□ 0.67
RFFL-206ENST00000447669 PUS1Q9Y606 427 aaKnown RBP eCLIP19.23■□□□□ 0.67
RFFL-206ENST00000447669 SNRPCP09234 159 aaKnown RBP19.22■□□□□ 0.67
RFFL-206ENST00000447669 ARL14EPLP0DKL9 152 aa19.22■□□□□ 0.67
RFFL-206ENST00000447669 YPEL3P61236 119 aaPredicted RBP19.22■□□□□ 0.67
RFFL-206ENST00000447669 LINC00305Q7Z4B0 112 aa19.22■□□□□ 0.67
RFFL-206ENST00000447669 OR4X2Q8NGF9 303 aa19.22■□□□□ 0.67
RFFL-206ENST00000447669 TGOLN2O43493 480 aa19.22■□□□□ 0.67
RFFL-206ENST00000447669 SLC35B1P78383 322 aa19.22■□□□□ 0.67
RFFL-206ENST00000447669 USF2Q15853 346 aaPredicted RBP19.22■□□□□ 0.67
RFFL-206ENST00000447669 HAGHQ16775 308 aa19.22■□□□□ 0.67
RFFL-206ENST00000447669 KLHDC1Q8N7A1 406 aa19.22■□□□□ 0.67
RFFL-206ENST00000447669 USMG5Q96IX5 58 aa19.22■□□□□ 0.67
RFFL-206ENST00000447669 SCRT1Q9BWW7 348 aa19.21■□□□□ 0.67
RFFL-206ENST00000447669 GNG13Q9P2W3 67 aa19.21■□□□□ 0.67
RFFL-206ENST00000447669 TRAV1-1A0A0B4J248 108 aa19.2■□□□□ 0.66
RFFL-206ENST00000447669 HYPMO75409 117 aa19.2■□□□□ 0.66
RFFL-206ENST00000447669 TOR2AQ5JU69 321 aa19.2■□□□□ 0.66
RFFL-206ENST00000447669 RNF125Q96EQ8 232 aa19.2■□□□□ 0.66
RFFL-206ENST00000447669 STAG3L2P0CL84 134 aa19.2■□□□□ 0.66
RFFL-206ENST00000447669 STAG3L3P0CL85 134 aa19.2■□□□□ 0.66
RFFL-206ENST00000447669 IL34Q6ZMJ4 242 aa19.2■□□□□ 0.66
RFFL-206ENST00000447669 C18orf65Q6ZTR6 163 aa19.2■□□□□ 0.66
RFFL-206ENST00000447669 Q8WTZ3 238 aa19.2■□□□□ 0.66
RFFL-206ENST00000447669 ZNF503Q96F45 646 aa19.2■□□□□ 0.66
RFFL-206ENST00000447669 WI2-2373I1.2A0A1W2PRP0 233 aa19.19■□□□□ 0.66
RFFL-206ENST00000447669 C9JQL5 133 aa19.19■□□□□ 0.66
RFFL-206ENST00000447669 ARL3P36405 182 aa19.19■□□□□ 0.66
RFFL-206ENST00000447669 TCTEX1D4Q5JR98 221 aa19.19■□□□□ 0.66
RFFL-206ENST00000447669 OR1L4Q8NGR5 311 aa19.19■□□□□ 0.66
RFFL-206ENST00000447669 SLC25A2Q9BXI2 301 aa19.19■□□□□ 0.66
RFFL-206ENST00000447669 HBE1P02100 147 aa19.18■□□□□ 0.66
RFFL-206ENST00000447669 PLP1P60201 277 aa19.18■□□□□ 0.66
RFFL-206ENST00000447669 C11orf44Q8N8P7 122 aa19.18■□□□□ 0.66
RFFL-206ENST00000447669 OR5AU1Q8NGC0 362 aa19.18■□□□□ 0.66
RFFL-206ENST00000447669 PFDN5Q99471 154 aa19.18■□□□□ 0.66
RFFL-206ENST00000447669 A0A0G2JLM5 398 aa19.18■□□□□ 0.66
RFFL-206ENST00000447669 OR2C1O95371 312 aa19.18■□□□□ 0.66
RFFL-206ENST00000447669 OR10J4P0C629 311 aa19.18■□□□□ 0.66
RFFL-206ENST00000447669 FOXE3Q13461 319 aa19.18■□□□□ 0.66
RFFL-206ENST00000447669 GUK1Q16774 197 aa19.18■□□□□ 0.66
RFFL-206ENST00000447669 ZNF343Q6P1L6 599 aa19.18■□□□□ 0.66
RFFL-206ENST00000447669 TOMM20LQ6UXN7 152 aa19.18■□□□□ 0.66
RFFL-206ENST00000447669 LINC01006Q8NI28 216 aa19.18■□□□□ 0.66
RFFL-206ENST00000447669 FAM167A-AS1Q96KT0 104 aa19.18■□□□□ 0.66
RFFL-206ENST00000447669 FAM210AQ96ND0 272 aa19.18■□□□□ 0.66
RFFL-206ENST00000447669 EIF5A2Q9GZV4 153 aaKnown RBP19.18■□□□□ 0.66
RFFL-206ENST00000447669 MRPL27Q9P0M9 148 aaKnown RBP19.18■□□□□ 0.66
RFFL-206ENST00000447669 JMJD1CQ15652 2540 aa19.17■□□□□ 0.66
RFFL-206ENST00000447669 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP19.17■□□□□ 0.66
RFFL-206ENST00000447669 HSPB1P04792 205 aaKnown RBP19.17■□□□□ 0.66
RFFL-206ENST00000447669 HIGD1AQ9Y241 93 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms