RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 MARCH1Q8TCQ1 289 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 TMEM56Q96MV1 263 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 SOSTQ9BQB4 213 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 SLC25A21Q9BQT8 299 aaPredicted RBP5.24□□□□□ -1.57
HDAC9-216ENST00000446646 CCDC32Q9BV29 185 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 SRRQ9GZT4 340 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 ZNF430Q9H8G1 570 aaPredicted RBP5.24□□□□□ -1.57
HDAC9-216ENST00000446646 SCRT2Q9NQ03 307 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 COA4Q9NYJ1 87 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 ZNF257Q9Y2Q1 563 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 SELENOKQ9Y6D0 94 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 FAT3Q8TDW7 4589 aa5.24□□□□□ -1.57
HDAC9-216ENST00000446646 FAM223BA6NKX1 122 aa5.23□□□□□ -1.57
HDAC9-216ENST00000446646 SRRM4A7MD48 611 aaKnown RBP5.23□□□□□ -1.57
HDAC9-216ENST00000446646 TMEM238C9JI98 176 aa5.23□□□□□ -1.57
HDAC9-216ENST00000446646 FCN1O00602 326 aa5.23□□□□□ -1.57
HDAC9-216ENST00000446646 ARPC1BO15143 372 aaKnown RBP5.23□□□□□ -1.57
HDAC9-216ENST00000446646 KRASP01116 189 aa5.23□□□□□ -1.57
HDAC9-216ENST00000446646 TRGV3P03979 118 aa5.23□□□□□ -1.57
HDAC9-216ENST00000446646 CRYGBP07316 175 aa5.23□□□□□ -1.57
HDAC9-216ENST00000446646 OR9G9P0C7N8 305 aa5.23□□□□□ -1.57
HDAC9-216ENST00000446646 DEFA4P12838 97 aa5.23□□□□□ -1.57
HDAC9-216ENST00000446646 HIST1H1BP16401 226 aaKnown RBP5.23□□□□□ -1.57
HDAC9-216ENST00000446646 FCGR2BP31994 310 aaPredicted RBP5.23□□□□□ -1.57
HDAC9-216ENST00000446646 KLF9Q13886 244 aaPredicted RBP5.23□□□□□ -1.57
HDAC9-216ENST00000446646 GTSCR1Q86UQ5 136 aa5.23□□□□□ -1.57
HDAC9-216ENST00000446646 FAM223AQ8IWN6 122 aa5.23□□□□□ -1.57
HDAC9-216ENST00000446646 VKORC1L1Q8N0U8 176 aa5.23□□□□□ -1.57
HDAC9-216ENST00000446646 OR1L6Q8NGR2 347 aa5.23□□□□□ -1.57
HDAC9-216ENST00000446646 OR1L8Q8NGR8 309 aa5.23□□□□□ -1.57
HDAC9-216ENST00000446646 OR5B3Q8NH48 314 aa5.23□□□□□ -1.57
HDAC9-216ENST00000446646 USMG5Q96IX5 58 aa5.23□□□□□ -1.57
HDAC9-216ENST00000446646 FYTTD1Q96QD9 318 aaKnown RBP5.23□□□□□ -1.57
HDAC9-216ENST00000446646 NEURL2Q9BR09 285 aa5.23□□□□□ -1.57
HDAC9-216ENST00000446646 FAM103A1Q9BTL3 118 aaKnown RBP5.23□□□□□ -1.57
HDAC9-216ENST00000446646 QTRT1Q9BXR0 403 aaKnown RBP5.23□□□□□ -1.57
HDAC9-216ENST00000446646 NAA60Q9H7X0 242 aa5.23□□□□□ -1.57
HDAC9-216ENST00000446646 ENY2Q9NPA8 101 aa5.23□□□□□ -1.57
HDAC9-216ENST00000446646 THYN1Q9P016 225 aa5.23□□□□□ -1.57
HDAC9-216ENST00000446646 NUBP2Q9Y5Y2 271 aa5.23□□□□□ -1.57
HDAC9-216ENST00000446646 TRAV26-1A0A087WT03 109 aa5.22□□□□□ -1.57
HDAC9-216ENST00000446646 CRYM-AS1A6NIL9 109 aa5.22□□□□□ -1.57
HDAC9-216ENST00000446646 NPIPB5A8MRT5 1133 aa5.22□□□□□ -1.57
HDAC9-216ENST00000446646 M0R2N4 97 aa5.22□□□□□ -1.57
HDAC9-216ENST00000446646 UPK2O00526 184 aa5.22□□□□□ -1.57
HDAC9-216ENST00000446646 CCSO14618 274 aa5.22□□□□□ -1.57
HDAC9-216ENST00000446646 CCNKO75909 580 aa5.22□□□□□ -1.57
HDAC9-216ENST00000446646 HSPB1P04792 205 aaKnown RBP5.22□□□□□ -1.57
HDAC9-216ENST00000446646 CSN3P07498 182 aa5.22□□□□□ -1.57
HDAC9-216ENST00000446646 IL7P13232 177 aa5.22□□□□□ -1.57
HDAC9-216ENST00000446646 EDN2P20800 178 aa5.22□□□□□ -1.57
HDAC9-216ENST00000446646 G6PCP35575 357 aa5.22□□□□□ -1.57
HDAC9-216ENST00000446646 TAS2R60P59551 318 aa5.22□□□□□ -1.57
HDAC9-216ENST00000446646 NANOS2P60321 138 aaKnown RBP5.22□□□□□ -1.57
HDAC9-216ENST00000446646 UBE2MP61081 183 aaKnown RBP5.22□□□□□ -1.57
HDAC9-216ENST00000446646 FLI1Q01543 452 aaPredicted RBP5.22□□□□□ -1.57
HDAC9-216ENST00000446646 PJVKQ0ZLH3 352 aa5.22□□□□□ -1.57
HDAC9-216ENST00000446646 ZNF846Q147U1 533 aa5.22□□□□□ -1.57
HDAC9-216ENST00000446646 C5orf47Q569G3 176 aa5.22□□□□□ -1.57
HDAC9-216ENST00000446646 TMEM128Q5BJH2 165 aa5.22□□□□□ -1.57
HDAC9-216ENST00000446646 TMED4Q7Z7H5 227 aa5.22□□□□□ -1.57
HDAC9-216ENST00000446646 CENPSQ8N2Z9 138 aa5.22□□□□□ -1.57
HDAC9-216ENST00000446646 SLC35G3Q8N808 338 aa5.22□□□□□ -1.57
HDAC9-216ENST00000446646 RBPMSQ93062 196 aaKnown RBP5.22□□□□□ -1.57
HDAC9-216ENST00000446646 IL22RA2Q969J5 263 aa5.22□□□□□ -1.57
HDAC9-216ENST00000446646 LSM10Q969L4 123 aaKnown RBP5.22□□□□□ -1.57
HDAC9-216ENST00000446646 SLC25A32Q9H2D1 315 aa5.22□□□□□ -1.57
HDAC9-216ENST00000446646 ZC4H2Q9NQZ6 224 aa5.22□□□□□ -1.57
HDAC9-216ENST00000446646 FAM30AQ9NZY2 134 aa5.22□□□□□ -1.57
HDAC9-216ENST00000446646 GPR132Q9UNW8 380 aa5.22□□□□□ -1.57
HDAC9-216ENST00000446646 DNAH8Q96JB1 4490 aa5.22□□□□□ -1.57
HDAC9-216ENST00000446646 DUXBA0A1W2PPF3 345 aa5.21□□□□□ -1.58
HDAC9-216ENST00000446646 C15orf61A6NNL5 157 aa5.21□□□□□ -1.58
HDAC9-216ENST00000446646 OR11H12B2RN74 326 aa5.21□□□□□ -1.58
HDAC9-216ENST00000446646 CDK2AP2O75956 126 aa5.21□□□□□ -1.58
HDAC9-216ENST00000446646 TRBV12-3P01733 135 aa5.21□□□□□ -1.58
HDAC9-216ENST00000446646 OR5AC1P0C628 307 aa5.21□□□□□ -1.58
HDAC9-216ENST00000446646 TRAPPC2P0DI81 140 aa5.21□□□□□ -1.58
HDAC9-216ENST00000446646 TRAPPC2BP0DI82 140 aa5.21□□□□□ -1.58
HDAC9-216ENST00000446646 AKR1C4P17516 323 aa5.21□□□□□ -1.58
HDAC9-216ENST00000446646 ZP3P21754 424 aa5.21□□□□□ -1.58
HDAC9-216ENST00000446646 HOXA1P49639 335 aaPredicted RBP5.21□□□□□ -1.58
HDAC9-216ENST00000446646 PPT1P50897 306 aa5.21□□□□□ -1.58
HDAC9-216ENST00000446646 SYNJ2BPP57105 145 aa5.21□□□□□ -1.58
HDAC9-216ENST00000446646 DEFA1P59665 94 aa5.21□□□□□ -1.58
HDAC9-216ENST00000446646 DEFA3P59666 94 aa5.21□□□□□ -1.58
HDAC9-216ENST00000446646 DEFA5Q01523 94 aa5.21□□□□□ -1.58
HDAC9-216ENST00000446646 RNASEKQ6P5S7 137 aaKnown RBP5.21□□□□□ -1.58
HDAC9-216ENST00000446646 ERASQ7Z444 233 aa5.21□□□□□ -1.58
HDAC9-216ENST00000446646 LGI3Q8N145 548 aa5.21□□□□□ -1.58
HDAC9-216ENST00000446646 TTC9CQ8N5M4 171 aa5.21□□□□□ -1.58
HDAC9-216ENST00000446646 SCARB1Q8WTV0 552 aa5.21□□□□□ -1.58
HDAC9-216ENST00000446646 GALNT14Q96FL9 552 aa5.21□□□□□ -1.58
HDAC9-216ENST00000446646 CXorf58Q96LI9 332 aa5.21□□□□□ -1.58
HDAC9-216ENST00000446646 PACRGQ96M98 296 aaPredicted RBP5.21□□□□□ -1.58
HDAC9-216ENST00000446646 MS4A10Q96PG2 267 aa5.21□□□□□ -1.58
HDAC9-216ENST00000446646 C20orf24Q9BUV8 137 aa5.21□□□□□ -1.58
HDAC9-216ENST00000446646 ELOVL1Q9BW60 279 aa5.21□□□□□ -1.58
HDAC9-216ENST00000446646 TMEM222Q9H0R3 208 aa5.21□□□□□ -1.58
HDAC9-216ENST00000446646 C5orf66Q9H5L9 145 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms