RNA–Protein interactions for RNA: ENST00000446625.6

LIMCH1-204, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 5

Gene LIMCH1, Length 789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-204ENST00000446625 TRAV26-1A0A087WT03 109 aa5.33□□□□□ -1.56
LIMCH1-204ENST00000446625 INS-IGF2F8WCM5 200 aa5.33□□□□□ -1.56
LIMCH1-204ENST00000446625 GPR31O00270 319 aa5.33□□□□□ -1.56
LIMCH1-204ENST00000446625 IL4P05112 153 aa5.33□□□□□ -1.56
LIMCH1-204ENST00000446625 DNAH10OSP0CZ25 163 aa5.33□□□□□ -1.56
LIMCH1-204ENST00000446625 AZU1P20160 251 aa5.33□□□□□ -1.56
LIMCH1-204ENST00000446625 ID1P41134 155 aa5.33□□□□□ -1.56
LIMCH1-204ENST00000446625 RPL5P46777 297 aaKnown RBP5.33□□□□□ -1.56
LIMCH1-204ENST00000446625 SUB1P53999 127 aaKnown RBP eCLIP5.33□□□□□ -1.56
LIMCH1-204ENST00000446625 PAX9P55771 341 aa5.33□□□□□ -1.56
LIMCH1-204ENST00000446625 GABARAPL2P60520 117 aa5.33□□□□□ -1.56
LIMCH1-204ENST00000446625 YPEL3P61236 119 aaPredicted RBP5.33□□□□□ -1.56
LIMCH1-204ENST00000446625 TBCEQ15813 527 aaPredicted RBP5.33□□□□□ -1.56
LIMCH1-204ENST00000446625 PHLDA2Q53GA4 152 aa5.33□□□□□ -1.56
LIMCH1-204ENST00000446625 SPATA31B1PQ5VZV4 182 aa5.33□□□□□ -1.56
LIMCH1-204ENST00000446625 EBLN2Q6P2I7 272 aa5.33□□□□□ -1.56
LIMCH1-204ENST00000446625 SLC35G3Q8N808 338 aa5.33□□□□□ -1.56
LIMCH1-204ENST00000446625 OR1S2Q8NGQ3 325 aa5.33□□□□□ -1.56
LIMCH1-204ENST00000446625 OR5H6Q8NGV6 325 aa5.33□□□□□ -1.56
LIMCH1-204ENST00000446625 COQ8AQ8NI60 647 aa5.33□□□□□ -1.56
LIMCH1-204ENST00000446625 FCGR1BQ92637 280 aa5.33□□□□□ -1.56
LIMCH1-204ENST00000446625 GNPNAT1Q96EK6 184 aaPredicted RBP5.33□□□□□ -1.56
LIMCH1-204ENST00000446625 FXYD6Q9H0Q3 95 aa5.33□□□□□ -1.56
LIMCH1-204ENST00000446625 KLK11Q9UBX7 282 aa5.33□□□□□ -1.56
LIMCH1-204ENST00000446625 MRPS16Q9Y3D3 137 aaKnown RBP5.33□□□□□ -1.56
LIMCH1-204ENST00000446625 FAT3Q8TDW7 4589 aa5.32□□□□□ -1.56
LIMCH1-204ENST00000446625 A0A087WTM6 91 aa5.32□□□□□ -1.56
LIMCH1-204ENST00000446625 A0A0B4J293 547 aa5.32□□□□□ -1.56
LIMCH1-204ENST00000446625 A0A0J9YX75 114 aa5.32□□□□□ -1.56
LIMCH1-204ENST00000446625 A0A0J9YY99 117 aa5.32□□□□□ -1.56
LIMCH1-204ENST00000446625 TRDV1A0A1B0GX56 115 aa5.32□□□□□ -1.56
LIMCH1-204ENST00000446625 NOTOA8MTQ0 251 aa5.32□□□□□ -1.56
LIMCH1-204ENST00000446625 SOCS3O14543 225 aa5.32□□□□□ -1.56
LIMCH1-204ENST00000446625 GSTZ1O43708 216 aaPredicted RBP5.32□□□□□ -1.56
LIMCH1-204ENST00000446625 GCSHP23434 173 aa5.32□□□□□ -1.56
LIMCH1-204ENST00000446625 TSPOP30536 169 aa5.32□□□□□ -1.56
LIMCH1-204ENST00000446625 OR10J1P30954 320 aa5.32□□□□□ -1.56
LIMCH1-204ENST00000446625 ETV6P41212 452 aa5.32□□□□□ -1.56
LIMCH1-204ENST00000446625 PSMB3P49720 205 aa5.32□□□□□ -1.56
LIMCH1-204ENST00000446625 RND2P52198 227 aa5.32□□□□□ -1.56
LIMCH1-204ENST00000446625 OR5I1Q13606 314 aa5.32□□□□□ -1.56
LIMCH1-204ENST00000446625 RNASE12Q5GAN4 147 aaKnown RBP5.32□□□□□ -1.56
LIMCH1-204ENST00000446625 PRSS54Q6PEW0 395 aa5.32□□□□□ -1.56
LIMCH1-204ENST00000446625 AMTNQ6UX39 209 aa5.32□□□□□ -1.56
LIMCH1-204ENST00000446625 OR6F1Q8NGZ6 308 aa5.32□□□□□ -1.56
LIMCH1-204ENST00000446625 RXFP4Q8TDU9 374 aa5.32□□□□□ -1.56
LIMCH1-204ENST00000446625 GPR146Q96CH1 333 aa5.32□□□□□ -1.56
LIMCH1-204ENST00000446625 ABHD1Q96SE0 405 aa5.32□□□□□ -1.56
LIMCH1-204ENST00000446625 AUNIPQ9H7T9 357 aa5.32□□□□□ -1.56
LIMCH1-204ENST00000446625 FAM212BQ9NTI7 297 aaPredicted RBP5.32□□□□□ -1.56
LIMCH1-204ENST00000446625 TNFRSF18Q9Y5U5 241 aa5.32□□□□□ -1.56
LIMCH1-204ENST00000446625 A0A087WXM4 84 aa5.31□□□□□ -1.56
LIMCH1-204ENST00000446625 LOC100506127A0A0U1RQW1 187 aa5.31□□□□□ -1.56
LIMCH1-204ENST00000446625 A8MTW9 85 aa5.31□□□□□ -1.56
LIMCH1-204ENST00000446625 CRXO43186 299 aaPredicted RBP5.31□□□□□ -1.56
LIMCH1-204ENST00000446625 INSP01308 110 aa5.31□□□□□ -1.56
LIMCH1-204ENST00000446625 IGKV1-5P01602 117 aa5.31□□□□□ -1.56
LIMCH1-204ENST00000446625 PMP2P02689 132 aa5.31□□□□□ -1.56
LIMCH1-204ENST00000446625 ELK1P19419 428 aa5.31□□□□□ -1.56
LIMCH1-204ENST00000446625 BSXQ3C1V8 233 aa5.31□□□□□ -1.56
LIMCH1-204ENST00000446625 IDNKQ5T6J7 187 aa5.31□□□□□ -1.56
LIMCH1-204ENST00000446625 SFXN4Q6P4A7 337 aa5.31□□□□□ -1.56
LIMCH1-204ENST00000446625 TBC1D26Q86UD7 250 aa5.31□□□□□ -1.56
LIMCH1-204ENST00000446625 OR51G1Q8NGK1 321 aa5.31□□□□□ -1.56
LIMCH1-204ENST00000446625 SLC25A38Q96DW6 304 aa5.31□□□□□ -1.56
LIMCH1-204ENST00000446625 C20orf173Q96LM9 149 aa5.31□□□□□ -1.56
LIMCH1-204ENST00000446625 MRPS26Q9BYN8 205 aaKnown RBP5.31□□□□□ -1.56
LIMCH1-204ENST00000446625 TXNL4BQ9NX01 149 aaKnown RBP5.31□□□□□ -1.56
LIMCH1-204ENST00000446625 BLOC1S6Q9UL45 172 aa5.31□□□□□ -1.56
LIMCH1-204ENST00000446625 M0R2Z0 102 aa5.3□□□□□ -1.56
LIMCH1-204ENST00000446625 ISLRO14498 428 aa5.3□□□□□ -1.56
LIMCH1-204ENST00000446625 NXPH3O95157 252 aa5.3□□□□□ -1.56
LIMCH1-204ENST00000446625 P0C879 139 aa5.3□□□□□ -1.56
LIMCH1-204ENST00000446625 RD3LP0DJH9 198 aa5.3□□□□□ -1.56
LIMCH1-204ENST00000446625 PSG1P11464 419 aa5.3□□□□□ -1.56
LIMCH1-204ENST00000446625 M6PRP20645 277 aa5.3□□□□□ -1.56
LIMCH1-204ENST00000446625 SDC2P34741 201 aa5.3□□□□□ -1.56
LIMCH1-204ENST00000446625 TGFBR1P36897 503 aa5.3□□□□□ -1.56
LIMCH1-204ENST00000446625 CBX5P45973 191 aa5.3□□□□□ -1.56
LIMCH1-204ENST00000446625 TAS2R20P59543 309 aa5.3□□□□□ -1.56
LIMCH1-204ENST00000446625 SPINK13Q1W4C9 94 aa5.3□□□□□ -1.56
LIMCH1-204ENST00000446625 BAP18Q8IXM2 172 aa5.3□□□□□ -1.56
LIMCH1-204ENST00000446625 SPARTQ8N0X7 666 aa5.3□□□□□ -1.56
LIMCH1-204ENST00000446625 ENY2Q9NPA8 101 aa5.3□□□□□ -1.56
LIMCH1-204ENST00000446625 IFT46Q9NQC8 304 aa5.3□□□□□ -1.56
LIMCH1-204ENST00000446625 DOK5Q9P104 306 aa5.3□□□□□ -1.56
LIMCH1-204ENST00000446625 A6NHS1 94 aa5.29□□□□□ -1.56
LIMCH1-204ENST00000446625 ZNF701M0R085 212 aaPredicted RBP5.29□□□□□ -1.56
LIMCH1-204ENST00000446625 SIVA1O15304 175 aa5.29□□□□□ -1.56
LIMCH1-204ENST00000446625 TOMM40O96008 361 aa5.29□□□□□ -1.56
LIMCH1-204ENST00000446625 SLC25A4P12235 298 aa5.29□□□□□ -1.56
LIMCH1-204ENST00000446625 HOXA5P20719 270 aa5.29□□□□□ -1.56
LIMCH1-204ENST00000446625 S100GP29377 79 aa5.29□□□□□ -1.56
LIMCH1-204ENST00000446625 B2MP61769 119 aa5.29□□□□□ -1.56
LIMCH1-204ENST00000446625 OR11H7Q8NGC8 314 aa5.29□□□□□ -1.56
LIMCH1-204ENST00000446625 OR5H2Q8NGV7 314 aa5.29□□□□□ -1.56
LIMCH1-204ENST00000446625 DEFB104AQ8WTQ1 72 aa5.29□□□□□ -1.56
LIMCH1-204ENST00000446625 NPIPB3Q92617 1050 aa5.29□□□□□ -1.56
LIMCH1-204ENST00000446625 RNF125Q96EQ8 232 aa5.29□□□□□ -1.56
LIMCH1-204ENST00000446625 ACY3Q96HD9 319 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms