RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 ATMQ13315 3056 aa9.48□□□□□ -0.89
HCFC1-203ENST00000444191 C17orf58Q2M2W7 97 aa9.48□□□□□ -0.89
HCFC1-203ENST00000444191 CIARTQ8N365 385 aaPredicted RBP9.48□□□□□ -0.89
HCFC1-203ENST00000444191 C18orf32Q8TCD1 76 aa9.48□□□□□ -0.89
HCFC1-203ENST00000444191 RPEQ96AT9 228 aa9.48□□□□□ -0.89
HCFC1-203ENST00000444191 TMEM70Q9BUB7 260 aa9.48□□□□□ -0.89
HCFC1-203ENST00000444191 TRBV9A0A0B4J1U6 114 aa9.47□□□□□ -0.89
HCFC1-203ENST00000444191 NCBP2LA6PVI3 153 aaKnown RBP9.47□□□□□ -0.89
HCFC1-203ENST00000444191 ZNF891A8MT65 544 aaPredicted RBP9.47□□□□□ -0.89
HCFC1-203ENST00000444191 IGHV3-23P01764 117 aa9.47□□□□□ -0.89
HCFC1-203ENST00000444191 FTH1P19P0C7X4 201 aa9.47□□□□□ -0.89
HCFC1-203ENST00000444191 RPL27AP46776 148 aaKnown RBP9.47□□□□□ -0.89
HCFC1-203ENST00000444191 PRRX1P54821 245 aa9.47□□□□□ -0.89
HCFC1-203ENST00000444191 OR4C13Q8NGP0 309 aa9.47□□□□□ -0.89
HCFC1-203ENST00000444191 FBXL15Q9H469 300 aa9.47□□□□□ -0.89
HCFC1-203ENST00000444191 TPSG1Q9NRR2 321 aa9.47□□□□□ -0.89
HCFC1-203ENST00000444191 FOXA2Q9Y261 457 aaPredicted RBP9.47□□□□□ -0.89
HCFC1-203ENST00000444191 IGHV3OR16-13A0A075B7E8 117 aa9.47□□□□□ -0.89
HCFC1-203ENST00000444191 IGHV3-74A0A0B4J1X5 117 aa9.47□□□□□ -0.89
HCFC1-203ENST00000444191 C9JCJ5 164 aa9.47□□□□□ -0.89
HCFC1-203ENST00000444191 CDX4O14627 284 aaPredicted RBP9.47□□□□□ -0.89
HCFC1-203ENST00000444191 P0C879 139 aa9.47□□□□□ -0.89
HCFC1-203ENST00000444191 FCER1GP30273 86 aa9.47□□□□□ -0.89
HCFC1-203ENST00000444191 PPOXP50336 477 aa9.47□□□□□ -0.89
HCFC1-203ENST00000444191 MPV17L2Q567V2 206 aa9.47□□□□□ -0.89
HCFC1-203ENST00000444191 VSTM2AQ8TAG5 236 aa9.47□□□□□ -0.89
HCFC1-203ENST00000444191 CHRDL1Q9BU40 450 aa9.47□□□□□ -0.89
HCFC1-203ENST00000444191 MAP1LC3CQ9BXW4 147 aa9.47□□□□□ -0.89
HCFC1-203ENST00000444191 TMEM191AQ9H0A3 160 aa9.47□□□□□ -0.89
HCFC1-203ENST00000444191 DSCAMO60469 2012 aa9.47□□□□□ -0.89
HCFC1-203ENST00000444191 MUC6Q6W4X9 2439 aa9.47□□□□□ -0.89
HCFC1-203ENST00000444191 NCOR2Q9Y618 2525 aa9.47□□□□□ -0.89
HCFC1-203ENST00000444191 E7EUB6 86 aa9.46□□□□□ -0.89
HCFC1-203ENST00000444191 RNASE2P10153 161 aaKnown RBP9.46□□□□□ -0.89
HCFC1-203ENST00000444191 VWC2Q2TAL6 325 aa9.46□□□□□ -0.89
HCFC1-203ENST00000444191 ZNF474Q6S9Z5 364 aaPredicted RBP9.46□□□□□ -0.89
HCFC1-203ENST00000444191 ZC2HC1AQ96GY0 325 aa9.46□□□□□ -0.89
HCFC1-203ENST00000444191 RASL11BQ9BPW5 248 aa9.46□□□□□ -0.89
HCFC1-203ENST00000444191 C20orf144Q9BQM9 153 aa9.46□□□□□ -0.89
HCFC1-203ENST00000444191 TMEM14BQ9NUH8 114 aa9.46□□□□□ -0.89
HCFC1-203ENST00000444191 LSM4Q9Y4Z0 139 aaKnown RBP9.46□□□□□ -0.89
HCFC1-203ENST00000444191 ADGRG4Q8IZF6 3080 aa9.46□□□□□ -0.89
HCFC1-203ENST00000444191 J3KRW8 73 aa9.46□□□□□ -0.89
HCFC1-203ENST00000444191 WT1P19544 449 aaPredicted RBP9.46□□□□□ -0.89
HCFC1-203ENST00000444191 LDLRAD2Q5SZI1 272 aa9.46□□□□□ -0.89
HCFC1-203ENST00000444191 ZFHX4Q86UP3 3567 aa9.46□□□□□ -0.9
HCFC1-203ENST00000444191 TNRC6AQ8NDV7 1962 aaKnown RBP9.46□□□□□ -0.9
HCFC1-203ENST00000444191 A0A1W2PRE2 83 aa9.46□□□□□ -0.9
HCFC1-203ENST00000444191 IGLC2P0DOY2 106 aa9.46□□□□□ -0.9
HCFC1-203ENST00000444191 IGLC3P0DOY3 106 aa9.46□□□□□ -0.9
HCFC1-203ENST00000444191 COX19Q49B96 90 aa9.46□□□□□ -0.9
HCFC1-203ENST00000444191 RPUSD1Q9UJJ7 312 aaKnown RBP9.46□□□□□ -0.9
HCFC1-203ENST00000444191 SLC25A15Q9Y619 301 aa9.46□□□□□ -0.9
HCFC1-203ENST00000444191 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.45□□□□□ -0.9
HCFC1-203ENST00000444191 FAM181BA6NEQ2 426 aa9.45□□□□□ -0.9
HCFC1-203ENST00000444191 TSPOP30536 169 aa9.45□□□□□ -0.9
HCFC1-203ENST00000444191 HBBP68871 147 aa9.45□□□□□ -0.9
HCFC1-203ENST00000444191 SP5Q6BEB4 398 aaPredicted RBP9.45□□□□□ -0.9
HCFC1-203ENST00000444191 TEX43Q6ZNM6 134 aa9.45□□□□□ -0.9
HCFC1-203ENST00000444191 SMIM15Q7Z3B0 74 aa9.45□□□□□ -0.9
HCFC1-203ENST00000444191 TET2Q6N021 2002 aaPredicted RBP9.45□□□□□ -0.9
HCFC1-203ENST00000444191 CGB1A6NKQ9 187 aa9.45□□□□□ -0.9
HCFC1-203ENST00000444191 CD40P25942 277 aa9.45□□□□□ -0.9
HCFC1-203ENST00000444191 FCGR2BP31994 310 aaPredicted RBP9.45□□□□□ -0.9
HCFC1-203ENST00000444191 KLF17Q5JT82 389 aaPredicted RBP9.45□□□□□ -0.9
HCFC1-203ENST00000444191 LYPD2Q6UXB3 125 aa9.45□□□□□ -0.9
HCFC1-203ENST00000444191 EPDR1Q9UM22 224 aa9.45□□□□□ -0.9
HCFC1-203ENST00000444191 F11RQ9Y624 299 aaKnown RBP9.45□□□□□ -0.9
HCFC1-203ENST00000444191 PRR20EP86478 221 aa9.45□□□□□ -0.9
HCFC1-203ENST00000444191 PRR20CP86479 221 aa9.45□□□□□ -0.9
HCFC1-203ENST00000444191 PRR20DP86480 221 aa9.45□□□□□ -0.9
HCFC1-203ENST00000444191 PRR20BP86481 221 aa9.45□□□□□ -0.9
HCFC1-203ENST00000444191 PRR20AP86496 221 aa9.45□□□□□ -0.9
HCFC1-203ENST00000444191 GFRALQ6UXV0 394 aa9.45□□□□□ -0.9
HCFC1-203ENST00000444191 LINC00173Q6ZV60 143 aa9.45□□□□□ -0.9
HCFC1-203ENST00000444191 SPACA3Q8IXA5 215 aa9.45□□□□□ -0.9
HCFC1-203ENST00000444191 C18orf15Q96N68 181 aa9.45□□□□□ -0.9
HCFC1-203ENST00000444191 SFXN3Q9BWM7 321 aa9.45□□□□□ -0.9
HCFC1-203ENST00000444191 K7EQM0 130 aa9.44□□□□□ -0.9
HCFC1-203ENST00000444191 TDGF1P13385 188 aa9.44□□□□□ -0.9
HCFC1-203ENST00000444191 IGLL1P15814 213 aa9.44□□□□□ -0.9
HCFC1-203ENST00000444191 CNTFRP26992 372 aa9.44□□□□□ -0.9
HCFC1-203ENST00000444191 NMUP48645 174 aa9.44□□□□□ -0.9
HCFC1-203ENST00000444191 SELENOTP62341 195 aa9.44□□□□□ -0.9
HCFC1-203ENST00000444191 WT1-ASQ06250 92 aa9.44□□□□□ -0.9
HCFC1-203ENST00000444191 TIMM23BQ5SRD1 257 aa9.44□□□□□ -0.9
HCFC1-203ENST00000444191 Q8N7P7 452 aa9.44□□□□□ -0.9
HCFC1-203ENST00000444191 GRAMD2BQ96HH9 432 aa9.44□□□□□ -0.9
HCFC1-203ENST00000444191 Q9H3A6 140 aa9.44□□□□□ -0.9
HCFC1-203ENST00000444191 FNDC4Q9H6D8 234 aaPredicted RBP9.44□□□□□ -0.9
HCFC1-203ENST00000444191 HIGD1AQ9Y241 93 aa9.44□□□□□ -0.9
HCFC1-203ENST00000444191 A0A087X0K7 114 aa9.44□□□□□ -0.9
HCFC1-203ENST00000444191 TRGV8A0A0C4DH27 118 aa9.44□□□□□ -0.9
HCFC1-203ENST00000444191 Q0VG73 95 aa9.44□□□□□ -0.9
HCFC1-203ENST00000444191 SLC25A34Q6PIV7 304 aa9.44□□□□□ -0.9
HCFC1-203ENST00000444191 OR4F17Q8NGA8 305 aa9.44□□□□□ -0.9
HCFC1-203ENST00000444191 NEUROG1Q92886 237 aa9.44□□□□□ -0.9
HCFC1-203ENST00000444191 GAFA1Q96PS6 74 aa9.44□□□□□ -0.9
HCFC1-203ENST00000444191 CSPG4Q6UVK1 2322 aa9.44□□□□□ -0.9
HCFC1-203ENST00000444191 KALRNO60229 2985 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms