RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 VSIRQ9H7M9 311 aa8.16□□□□□ -1.1
HDAC6-211ENST00000443563 RABAC1Q9UI14 185 aa8.16□□□□□ -1.1
HDAC6-211ENST00000443563 SMCO3A2RU48 225 aa8.15□□□□□ -1.1
HDAC6-211ENST00000443563 OR4C46A6NHA9 309 aa8.15□□□□□ -1.1
HDAC6-211ENST00000443563 PMS2P5A8MQ11 134 aa8.15□□□□□ -1.1
HDAC6-211ENST00000443563 PET100P0DJ07 73 aa8.15□□□□□ -1.1
HDAC6-211ENST00000443563 PSG1P11464 419 aa8.15□□□□□ -1.1
HDAC6-211ENST00000443563 S100A7P31151 101 aa8.15□□□□□ -1.1
HDAC6-211ENST00000443563 CAV2P51636 162 aa8.15□□□□□ -1.1
HDAC6-211ENST00000443563 TMEM144Q7Z5S9 345 aa8.15□□□□□ -1.1
HDAC6-211ENST00000443563 STX12Q86Y82 276 aa8.15□□□□□ -1.1
HDAC6-211ENST00000443563 Q8N1Y9 231 aa8.15□□□□□ -1.1
HDAC6-211ENST00000443563 RNF2Q99496 336 aa8.15□□□□□ -1.1
HDAC6-211ENST00000443563 B9D2Q9BPU9 175 aa8.15□□□□□ -1.1
HDAC6-211ENST00000443563 NPVFQ9HCQ7 196 aa8.15□□□□□ -1.1
HDAC6-211ENST00000443563 IGKV1D-37A0A075B6S9 117 aa8.14□□□□□ -1.11
HDAC6-211ENST00000443563 IGHV3-49A0A0A0MS15 119 aa8.14□□□□□ -1.11
HDAC6-211ENST00000443563 A8MZ25 164 aa8.14□□□□□ -1.11
HDAC6-211ENST00000443563 E5RGE8 158 aa8.14□□□□□ -1.11
HDAC6-211ENST00000443563 DEDDO75618 318 aa8.14□□□□□ -1.11
HDAC6-211ENST00000443563 SIX6O95475 246 aa8.14□□□□□ -1.11
HDAC6-211ENST00000443563 CMC4P56277 68 aaPredicted RBP8.14□□□□□ -1.11
HDAC6-211ENST00000443563 SELENOTP62341 195 aa8.14□□□□□ -1.11
HDAC6-211ENST00000443563 HBG1P69891 147 aa8.14□□□□□ -1.11
HDAC6-211ENST00000443563 HBG2P69892 147 aa8.14□□□□□ -1.11
HDAC6-211ENST00000443563 ZNF90Q03938 601 aa8.14□□□□□ -1.11
HDAC6-211ENST00000443563 TCF24Q7RTU0 167 aa8.14□□□□□ -1.11
HDAC6-211ENST00000443563 BPIFCQ8NFQ6 507 aa8.14□□□□□ -1.11
HDAC6-211ENST00000443563 ST8SIA2Q92186 375 aa8.14□□□□□ -1.11
HDAC6-211ENST00000443563 RNF125Q96EQ8 232 aa8.14□□□□□ -1.11
HDAC6-211ENST00000443563 TUBA4BQ9H853 241 aa8.14□□□□□ -1.11
HDAC6-211ENST00000443563 LYRM2Q9NU23 88 aaPredicted RBP8.14□□□□□ -1.11
HDAC6-211ENST00000443563 ALG5Q9Y673 324 aa8.14□□□□□ -1.11
HDAC6-211ENST00000443563 TRAV2A0A0B4J234 112 aa8.13□□□□□ -1.11
HDAC6-211ENST00000443563 HELTA6NFD8 242 aa8.13□□□□□ -1.11
HDAC6-211ENST00000443563 OR11H12B2RN74 326 aa8.13□□□□□ -1.11
HDAC6-211ENST00000443563 APOHP02749 345 aaPredicted RBP8.13□□□□□ -1.11
HDAC6-211ENST00000443563 NHLRC4P0CG21 123 aaPredicted RBP8.13□□□□□ -1.11
HDAC6-211ENST00000443563 IGHV4-30-4P0DP06 118 aa8.13□□□□□ -1.11
HDAC6-211ENST00000443563 S100A11P31949 105 aa8.13□□□□□ -1.11
HDAC6-211ENST00000443563 SULT1A1P50225 295 aa8.13□□□□□ -1.11
HDAC6-211ENST00000443563 AP2S1P53680 142 aaPredicted RBP8.13□□□□□ -1.11
HDAC6-211ENST00000443563 RRAS2P62070 204 aaPredicted RBP8.13□□□□□ -1.11
HDAC6-211ENST00000443563 RPL11P62913 178 aaKnown RBP8.13□□□□□ -1.11
HDAC6-211ENST00000443563 SLC38A11Q08AI6 406 aa8.13□□□□□ -1.11
HDAC6-211ENST00000443563 USF2Q15853 346 aaPredicted RBP8.13□□□□□ -1.11
HDAC6-211ENST00000443563 ATP6V1FQ16864 119 aa8.13□□□□□ -1.11
HDAC6-211ENST00000443563 TEPPQ6URK8 271 aa8.13□□□□□ -1.11
HDAC6-211ENST00000443563 S100A7AQ86SG5 101 aa8.13□□□□□ -1.11
HDAC6-211ENST00000443563 PBDC1Q9BVG4 233 aa8.13□□□□□ -1.11
HDAC6-211ENST00000443563 SLC25A31Q9H0C2 315 aa8.13□□□□□ -1.11
HDAC6-211ENST00000443563 C11orf1Q9H5F2 150 aa8.13□□□□□ -1.11
HDAC6-211ENST00000443563 SLC45A2Q9UMX9 530 aa8.13□□□□□ -1.11
HDAC6-211ENST00000443563 SELENOKQ9Y6D0 94 aa8.13□□□□□ -1.11
HDAC6-211ENST00000443563 U3KQE9 123 aa8.13□□□□□ -1.11
HDAC6-211ENST00000443563 IGKV1OR2-108A0A075B7D4 117 aa8.12□□□□□ -1.11
HDAC6-211ENST00000443563 IGHV3OR16-13A0A075B7E8 117 aa8.12□□□□□ -1.11
HDAC6-211ENST00000443563 IGHV3-74A0A0B4J1X5 117 aa8.12□□□□□ -1.11
HDAC6-211ENST00000443563 FAM24AA6NFZ4 105 aa8.12□□□□□ -1.11
HDAC6-211ENST00000443563 DNASE2O00115 360 aaPredicted RBP8.12□□□□□ -1.11
HDAC6-211ENST00000443563 CCNKO75909 580 aa8.12□□□□□ -1.11
HDAC6-211ENST00000443563 DFFBO76075 338 aa8.12□□□□□ -1.11
HDAC6-211ENST00000443563 CD7P09564 240 aa8.12□□□□□ -1.11
HDAC6-211ENST00000443563 P2RY1P47900 373 aa8.12□□□□□ -1.11
HDAC6-211ENST00000443563 H2BFSP57053 126 aa8.12□□□□□ -1.11
HDAC6-211ENST00000443563 LYZP61626 148 aa8.12□□□□□ -1.11
HDAC6-211ENST00000443563 RAB31Q13636 194 aa8.12□□□□□ -1.11
HDAC6-211ENST00000443563 LRRC37A5PQ49AS3 106 aa8.12□□□□□ -1.11
HDAC6-211ENST00000443563 FAM90A2PQ658T7 463 aa8.12□□□□□ -1.11
HDAC6-211ENST00000443563 C16orf54Q6UWD8 224 aa8.12□□□□□ -1.11
HDAC6-211ENST00000443563 CYP2G1PQ6ZSU1 146 aa8.12□□□□□ -1.11
HDAC6-211ENST00000443563 LILRB2Q8N423 598 aa8.12□□□□□ -1.11
HDAC6-211ENST00000443563 TMEM252Q8N6L7 170 aa8.12□□□□□ -1.11
HDAC6-211ENST00000443563 PPP1R1CQ8WVI7 109 aa8.12□□□□□ -1.11
HDAC6-211ENST00000443563 FAM110AQ9BQ89 295 aa8.12□□□□□ -1.11
HDAC6-211ENST00000443563 MED28Q9H204 178 aa8.12□□□□□ -1.11
HDAC6-211ENST00000443563 FBXL17Q9UF56 701 aa8.12□□□□□ -1.11
HDAC6-211ENST00000443563 IGHV3-66A0A0C4DH42 116 aa8.11□□□□□ -1.11
HDAC6-211ENST00000443563 CST7O76096 145 aa8.11□□□□□ -1.11
HDAC6-211ENST00000443563 FRMD6-AS1P0C7T7 363 aa8.11□□□□□ -1.11
HDAC6-211ENST00000443563 OR2F1Q13607 317 aa8.11□□□□□ -1.11
HDAC6-211ENST00000443563 C1orf194Q5T5A4 169 aa8.11□□□□□ -1.11
HDAC6-211ENST00000443563 ZNF546Q86UE3 836 aa8.11□□□□□ -1.11
HDAC6-211ENST00000443563 ASB13Q8WXK3 278 aa8.11□□□□□ -1.11
HDAC6-211ENST00000443563 PPP1R14BQ96C90 147 aa8.11□□□□□ -1.11
HDAC6-211ENST00000443563 MS4A6AQ9H2W1 248 aa8.11□□□□□ -1.11
HDAC6-211ENST00000443563 UQCC1Q9NVA1 299 aa8.11□□□□□ -1.11
HDAC6-211ENST00000443563 C19orf73Q9NVV2 129 aa8.11□□□□□ -1.11
HDAC6-211ENST00000443563 RNF24Q9Y225 148 aa8.11□□□□□ -1.11
HDAC6-211ENST00000443563 IGKV3-7A0A075B6H7 116 aa8.1□□□□□ -1.11
HDAC6-211ENST00000443563 IGSF23A1L1A6 192 aa8.1□□□□□ -1.11
HDAC6-211ENST00000443563 BUB3O43684 328 aa8.1□□□□□ -1.11
HDAC6-211ENST00000443563 MPC2O95563 127 aa8.1□□□□□ -1.11
HDAC6-211ENST00000443563 BAXQ07812 192 aa8.1□□□□□ -1.11
HDAC6-211ENST00000443563 ARL16Q0P5N6 197 aa8.1□□□□□ -1.11
HDAC6-211ENST00000443563 OXA1LQ15070 435 aa8.1□□□□□ -1.11
HDAC6-211ENST00000443563 PXDC1Q5TGL8 231 aa8.1□□□□□ -1.11
HDAC6-211ENST00000443563 DEFB125Q8N687 156 aa8.1□□□□□ -1.11
HDAC6-211ENST00000443563 TMEM217Q8N7C4 229 aa8.1□□□□□ -1.11
HDAC6-211ENST00000443563 GLMPQ8WWB7 406 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms