RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 NCOA6Q14686 2063 aaPredicted RBP18.37■□□□□ 0.53
CTDSPL-206ENST00000443503 C5orf52A6NGY3 159 aa18.37■□□□□ 0.53
CTDSPL-206ENST00000443503 TCF21O43680 179 aa18.37■□□□□ 0.53
CTDSPL-206ENST00000443503 LMO1P25800 156 aa18.36■□□□□ 0.53
CTDSPL-206ENST00000443503 KLF17Q5JT82 389 aaPredicted RBP18.36■□□□□ 0.53
CTDSPL-206ENST00000443503 KIF26AQ9ULI4 1882 aaPredicted RBP18.36■□□□□ 0.53
CTDSPL-206ENST00000443503 MLANAQ16655 118 aa18.36■□□□□ 0.53
CTDSPL-206ENST00000443503 DCAF16Q9NXF7 216 aa18.36■□□□□ 0.53
CTDSPL-206ENST00000443503 IGLV3-1P01715 115 aa18.36■□□□□ 0.53
CTDSPL-206ENST00000443503 RNF166Q96A37 237 aaPredicted RBP18.36■□□□□ 0.53
CTDSPL-206ENST00000443503 TMEM242Q9NWH2 141 aa18.36■□□□□ 0.53
CTDSPL-206ENST00000443503 TNFSF13O75888 250 aa18.35■□□□□ 0.53
CTDSPL-206ENST00000443503 REC114Q7Z4M0 266 aa18.35■□□□□ 0.53
CTDSPL-206ENST00000443503 PRR14LQ5THK1 2151 aa18.35■□□□□ 0.53
CTDSPL-206ENST00000443503 PSG1P11464 419 aa18.35■□□□□ 0.53
CTDSPL-206ENST00000443503 FBLL1A6NHQ2 334 aaKnown RBP18.35■□□□□ 0.53
CTDSPL-206ENST00000443503 TSPOP30536 169 aa18.35■□□□□ 0.53
CTDSPL-206ENST00000443503 ZNF600Q6ZNG1 722 aa18.35■□□□□ 0.53
CTDSPL-206ENST00000443503 C14orf144Q96I85 54 aa18.35■□□□□ 0.53
CTDSPL-206ENST00000443503 SOX21Q9Y651 276 aaPredicted RBP18.35■□□□□ 0.53
CTDSPL-206ENST00000443503 C7orf71A4D174 169 aa18.35■□□□□ 0.53
CTDSPL-206ENST00000443503 C9JCJ5 164 aa18.35■□□□□ 0.53
CTDSPL-206ENST00000443503 GFI1BQ5VTD9 330 aa18.35■□□□□ 0.53
CTDSPL-206ENST00000443503 CTAG1AP78358 180 aa18.34■□□□□ 0.53
CTDSPL-206ENST00000443503 SPSB3Q6PJ21 355 aa18.34■□□□□ 0.53
CTDSPL-206ENST00000443503 FER1L6-AS1Q8NA97 138 aa18.34■□□□□ 0.53
CTDSPL-206ENST00000443503 PSG8Q9UQ74 426 aa18.34■□□□□ 0.53
CTDSPL-206ENST00000443503 LINC00587B1AMM8 73 aa18.34■□□□□ 0.53
CTDSPL-206ENST00000443503 LOC102724200A0A096LPH7 203 aaPredicted RBP18.34■□□□□ 0.53
CTDSPL-206ENST00000443503 GCSHP23434 173 aa18.34■□□□□ 0.53
CTDSPL-206ENST00000443503 DUX5Q96PT3 197 aa18.34■□□□□ 0.53
CTDSPL-206ENST00000443503 UBE2CO00762 179 aa18.33■□□□□ 0.53
CTDSPL-206ENST00000443503 SMAD7O15105 426 aaKnown RBP18.33■□□□□ 0.53
CTDSPL-206ENST00000443503 C8orf46Q8TAG6 207 aa18.33■□□□□ 0.53
CTDSPL-206ENST00000443503 NRN1Q9NPD7 142 aa18.33■□□□□ 0.53
CTDSPL-206ENST00000443503 TRAV40A0A0B4J280 105 aa18.33■□□□□ 0.52
CTDSPL-206ENST00000443503 E7EQL1 145 aa18.33■□□□□ 0.52
CTDSPL-206ENST00000443503 COL8A2P25067 703 aa18.33■□□□□ 0.52
CTDSPL-206ENST00000443503 ERVK11-1P61568 191 aa18.33■□□□□ 0.52
CTDSPL-206ENST00000443503 ZNF56Q15929 161 aa18.33■□□□□ 0.52
CTDSPL-206ENST00000443503 Q6AWC8 147 aa18.32■□□□□ 0.52
CTDSPL-206ENST00000443503 RAX2Q96IS3 184 aa18.32■□□□□ 0.52
CTDSPL-206ENST00000443503 OTOGLQ3ZCN5 2332 aa18.32■□□□□ 0.52
CTDSPL-206ENST00000443503 PMS2P5A8MQ11 134 aa18.32■□□□□ 0.52
CTDSPL-206ENST00000443503 NPIPB6E9PJ23 425 aa18.32■□□□□ 0.52
CTDSPL-206ENST00000443503 TEX29Q8N6K0 151 aa18.32■□□□□ 0.52
CTDSPL-206ENST00000443503 F11RQ9Y624 299 aaKnown RBP18.32■□□□□ 0.52
CTDSPL-206ENST00000443503 ZNF414Q96IQ9 312 aa18.32■□□□□ 0.52
CTDSPL-206ENST00000443503 ZNF324O75467 553 aaPredicted RBP18.31■□□□□ 0.52
CTDSPL-206ENST00000443503 PAX9P55771 341 aa18.31■□□□□ 0.52
CTDSPL-206ENST00000443503 TPTE2P1Q5T6R2 138 aa18.31■□□□□ 0.52
CTDSPL-206ENST00000443503 HIST1H2BLQ99880 126 aa18.31■□□□□ 0.52
CTDSPL-206ENST00000443503 SCRT1Q9BWW7 348 aa18.31■□□□□ 0.52
CTDSPL-206ENST00000443503 DKK1O94907 266 aa18.31■□□□□ 0.52
CTDSPL-206ENST00000443503 RNF138Q8WVD3 245 aa18.31■□□□□ 0.52
CTDSPL-206ENST00000443503 PIEZO1Q92508 2521 aa18.31■□□□□ 0.52
CTDSPL-206ENST00000443503 FABP5P3A8MUU1 101 aa18.3■□□□□ 0.52
CTDSPL-206ENST00000443503 IGKV1-39P01597 117 aa18.3■□□□□ 0.52
CTDSPL-206ENST00000443503 IGKV1D-39P04432 117 aa18.3■□□□□ 0.52
CTDSPL-206ENST00000443503 A0A1B0GV90 55 aa18.3■□□□□ 0.52
CTDSPL-206ENST00000443503 EFNA4P52798 201 aa18.3■□□□□ 0.52
CTDSPL-206ENST00000443503 VMO1Q7Z5L0 202 aa18.3■□□□□ 0.52
CTDSPL-206ENST00000443503 RAB37Q96AX2 223 aa18.3■□□□□ 0.52
CTDSPL-206ENST00000443503 KIR2DL4Q99706 377 aa18.3■□□□□ 0.52
CTDSPL-206ENST00000443503 ORMDL3Q8N138 153 aa18.3■□□□□ 0.52
CTDSPL-206ENST00000443503 SIGLEC9Q9Y336 463 aa18.3■□□□□ 0.52
CTDSPL-206ENST00000443503 RNASE2P10153 161 aaKnown RBP18.29■□□□□ 0.52
CTDSPL-206ENST00000443503 FAM90A2PQ658T7 463 aa18.29■□□□□ 0.52
CTDSPL-206ENST00000443503 EXOC3-AS1Q8N2X6 119 aa18.29■□□□□ 0.52
CTDSPL-206ENST00000443503 PRDM13Q9H4Q3 707 aa18.29■□□□□ 0.52
CTDSPL-206ENST00000443503 AREGP15514 252 aa18.29■□□□□ 0.52
CTDSPL-206ENST00000443503 DUX4L9Q6RFH8 374 aaPredicted RBP18.29■□□□□ 0.52
CTDSPL-206ENST00000443503 ST6GALNAC6Q969X2 333 aa18.29■□□□□ 0.52
CTDSPL-206ENST00000443503 A0A1B0GWJ7 208 aa18.29■□□□□ 0.52
CTDSPL-206ENST00000443503 ASIPP42127 132 aa18.29■□□□□ 0.52
CTDSPL-206ENST00000443503 C2orf16Q68DN1 1984 aa18.29■□□□□ 0.52
CTDSPL-206ENST00000443503 CEACAM4O75871 244 aa18.29■□□□□ 0.52
CTDSPL-206ENST00000443503 SNCGO76070 127 aa18.29■□□□□ 0.52
CTDSPL-206ENST00000443503 BUB1B-PAK6H3BSN5 160 aa18.28■□□□□ 0.52
CTDSPL-206ENST00000443503 TMEM219Q86XT9 240 aa18.28■□□□□ 0.52
CTDSPL-206ENST00000443503 IGFL3Q6UXB1 125 aa18.28■□□□□ 0.52
CTDSPL-206ENST00000443503 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.28■□□□□ 0.52
CTDSPL-206ENST00000443503 NUDT10Q8NFP7 164 aa18.28■□□□□ 0.52
CTDSPL-206ENST00000443503 NUDT11Q96G61 164 aa18.28■□□□□ 0.52
CTDSPL-206ENST00000443503 HIST3H2BBQ8N257 126 aa18.27■□□□□ 0.52
CTDSPL-206ENST00000443503 C5orf64Q2M2E5 130 aa18.27■□□□□ 0.52
CTDSPL-206ENST00000443503 C15orf32Q32M92 178 aa18.27■□□□□ 0.52
CTDSPL-206ENST00000443503 GLMPQ8WWB7 406 aa18.27■□□□□ 0.52
CTDSPL-206ENST00000443503 SLC50A1Q9BRV3 221 aa18.27■□□□□ 0.52
CTDSPL-206ENST00000443503 SNAI2O43623 268 aa18.27■□□□□ 0.52
CTDSPL-206ENST00000443503 PPIFP30405 207 aaKnown RBP18.27■□□□□ 0.52
CTDSPL-206ENST00000443503 RRN3P1Q2M238 152 aa18.27■□□□□ 0.51
CTDSPL-206ENST00000443503 TSKUQ8WUA8 353 aa18.27■□□□□ 0.51
CTDSPL-206ENST00000443503 SLC25A39Q9BZJ4 359 aaPredicted RBP18.27■□□□□ 0.51
CTDSPL-206ENST00000443503 CENPFP49454 3210 aa18.26■□□□□ 0.51
CTDSPL-206ENST00000443503 A0A1B0GW15 77 aa18.26■□□□□ 0.51
CTDSPL-206ENST00000443503 TMEM160Q9NX00 188 aa18.26■□□□□ 0.51
CTDSPL-206ENST00000443503 PCDH15Q96QU1 1955 aa18.26■□□□□ 0.51
CTDSPL-206ENST00000443503 FOXL1Q12952 345 aa18.26■□□□□ 0.51
CTDSPL-206ENST00000443503 GNB1LQ9BYB4 327 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms