RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 HLA-DMBP28068 263 aa3.01□□□□□ -1.93
VPS50-206ENST00000443443 ARPP19P56211 112 aa3.01□□□□□ -1.93
VPS50-206ENST00000443443 QRFPP83859 136 aa3.01□□□□□ -1.93
VPS50-206ENST00000443443 MYL5Q02045 173 aa3.01□□□□□ -1.93
VPS50-206ENST00000443443 PLGLB1Q02325 96 aa3.01□□□□□ -1.93
VPS50-206ENST00000443443 MEIG1Q5JSS6 88 aa3.01□□□□□ -1.93
VPS50-206ENST00000443443 LCE1CQ5T751 118 aa3.01□□□□□ -1.93
VPS50-206ENST00000443443 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
VPS50-206ENST00000443443 C22orf39Q6P5X5 142 aa3.01□□□□□ -1.93
VPS50-206ENST00000443443 LCN15Q6UWW0 184 aa3.01□□□□□ -1.93
VPS50-206ENST00000443443 MIR17HGQ75NE6 70 aa3.01□□□□□ -1.93
VPS50-206ENST00000443443 PHF5AQ7RTV0 110 aaKnown RBP3.01□□□□□ -1.93
VPS50-206ENST00000443443 SNX29P2Q8IUI4 249 aa3.01□□□□□ -1.93
VPS50-206ENST00000443443 ZNF101Q8IZC7 436 aa3.01□□□□□ -1.93
VPS50-206ENST00000443443 APCDD1LQ8NCL9 501 aa3.01□□□□□ -1.93
VPS50-206ENST00000443443 OR5D16Q8NGK9 328 aa3.01□□□□□ -1.93
VPS50-206ENST00000443443 NAT14Q8WUY8 206 aa3.01□□□□□ -1.93
VPS50-206ENST00000443443 ZNF714Q96N38 554 aa3.01□□□□□ -1.93
VPS50-206ENST00000443443 NAA38Q9BRA0 125 aaKnown RBP3.01□□□□□ -1.93
VPS50-206ENST00000443443 SPANXDQ9BXN6 97 aa3.01□□□□□ -1.93
VPS50-206ENST00000443443 TRAPPC1Q9Y5R8 145 aa3.01□□□□□ -1.93
VPS50-206ENST00000443443 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.01□□□□□ -1.93
VPS50-206ENST00000443443 NCAPD3P42695 1498 aa3.01□□□□□ -1.93
VPS50-206ENST00000443443 RAPGEF2Q9Y4G8 1499 aa3.01□□□□□ -1.93
VPS50-206ENST00000443443 RAI1Q7Z5J4 1906 aaPredicted RBP3□□□□□ -1.93
VPS50-206ENST00000443443 IGKV1-9A0A0C4DH69 117 aa3□□□□□ -1.93
VPS50-206ENST00000443443 A0A0G2JMM0 328 aa3□□□□□ -1.93
VPS50-206ENST00000443443 TRBV27A0A0K0K1C4 114 aa3□□□□□ -1.93
VPS50-206ENST00000443443 A0A1W2PPB8 328 aa3□□□□□ -1.93
VPS50-206ENST00000443443 GRIFINA4D1Z8 144 aa3□□□□□ -1.93
VPS50-206ENST00000443443 KIR3DP1A8MWS1 328 aa3□□□□□ -1.93
VPS50-206ENST00000443443 C11orf94C9JXX5 98 aa3□□□□□ -1.93
VPS50-206ENST00000443443 SH2D1AO60880 128 aa3□□□□□ -1.93
VPS50-206ENST00000443443 SOD1P00441 154 aa3□□□□□ -1.93
VPS50-206ENST00000443443 CGB3P0DN86 165 aa3□□□□□ -1.93
VPS50-206ENST00000443443 CGB7P0DN87 165 aa3□□□□□ -1.93
VPS50-206ENST00000443443 ZNF93P35789 620 aaPredicted RBP3□□□□□ -1.93
VPS50-206ENST00000443443 FOXA3P55318 350 aaPredicted RBP3□□□□□ -1.93
VPS50-206ENST00000443443 TPPP2P59282 170 aa3□□□□□ -1.93
VPS50-206ENST00000443443 GNB2P62879 340 aa3□□□□□ -1.93
VPS50-206ENST00000443443 IL17AQ16552 155 aa3□□□□□ -1.93
VPS50-206ENST00000443443 COL5A1-AS1Q5SY13 56 aa3□□□□□ -1.93
VPS50-206ENST00000443443 C10orf91Q5T1B1 145 aa3□□□□□ -1.93
VPS50-206ENST00000443443 EIF5AL1Q6IS14 154 aaKnown RBP3□□□□□ -1.93
VPS50-206ENST00000443443 ZNF705AQ6ZN79 300 aaPredicted RBP3□□□□□ -1.93
VPS50-206ENST00000443443 ZFP62Q8NB50 900 aaPredicted RBP3□□□□□ -1.93
VPS50-206ENST00000443443 OR5H6Q8NGV6 325 aa3□□□□□ -1.93
VPS50-206ENST00000443443 WFDC5Q8TCV5 224 aa3□□□□□ -1.93
VPS50-206ENST00000443443 SCGB3A1Q96QR1 104 aa3□□□□□ -1.93
VPS50-206ENST00000443443 MRPL57Q9BQC6 102 aaKnown RBP3□□□□□ -1.93
VPS50-206ENST00000443443 GINS4Q9BRT9 223 aa3□□□□□ -1.93
VPS50-206ENST00000443443 NPCDR1Q9BY65 106 aa3□□□□□ -1.93
VPS50-206ENST00000443443 C11orf1Q9H5F2 150 aa3□□□□□ -1.93
VPS50-206ENST00000443443 LINC00588Q9Y4M8 146 aa3□□□□□ -1.93
VPS50-206ENST00000443443 MBD5Q9P267 1494 aa3□□□□□ -1.93
VPS50-206ENST00000443443 ZNF106Q9H2Y7 1883 aaKnown RBP2.99□□□□□ -1.93
VPS50-206ENST00000443443 KIF13BQ9NQT8 1826 aa2.99□□□□□ -1.93
VPS50-206ENST00000443443 TRBV24-1A0A075B6N3 115 aa2.99□□□□□ -1.93
VPS50-206ENST00000443443 FAM236AA0A1B0GUQ0 79 aa2.99□□□□□ -1.93
VPS50-206ENST00000443443 FAM236BA0A1B0GV22 79 aa2.99□□□□□ -1.93
VPS50-206ENST00000443443 SPAARA0A1B0GVQ0 90 aa2.99□□□□□ -1.93
VPS50-206ENST00000443443 ZNF727A8MUV8 499 aa2.99□□□□□ -1.93
VPS50-206ENST00000443443 A8MWP4 228 aa2.99□□□□□ -1.93
VPS50-206ENST00000443443 A8MWP6 167 aa2.99□□□□□ -1.93
VPS50-206ENST00000443443 IGKV1D-33P01593 117 aa2.99□□□□□ -1.93
VPS50-206ENST00000443443 IGKV1-33P01594 117 aa2.99□□□□□ -1.93
VPS50-206ENST00000443443 IGHV1-69P01742 117 aa2.99□□□□□ -1.93
VPS50-206ENST00000443443 IGHV3-7P01780 117 aa2.99□□□□□ -1.93
VPS50-206ENST00000443443 TRGV3P03979 118 aa2.99□□□□□ -1.93
VPS50-206ENST00000443443 TCRAP04437 139 aa2.99□□□□□ -1.93
VPS50-206ENST00000443443 CRHBPP24387 322 aa2.99□□□□□ -1.93
VPS50-206ENST00000443443 LSM3P62310 102 aaKnown RBP2.99□□□□□ -1.93
VPS50-206ENST00000443443 DIAPH2-AS1Q14236 149 aa2.99□□□□□ -1.93
VPS50-206ENST00000443443 UBE2SQ16763 222 aa2.99□□□□□ -1.93
VPS50-206ENST00000443443 ZNF322Q6U7Q0 402 aaPredicted RBP2.99□□□□□ -1.93
VPS50-206ENST00000443443 IZUMO2Q6UXV1 221 aa2.99□□□□□ -1.93
VPS50-206ENST00000443443 RPS19BP1Q86WX3 136 aaKnown RBP2.99□□□□□ -1.93
VPS50-206ENST00000443443 SAXO1Q8IYX7 474 aa2.99□□□□□ -1.93
VPS50-206ENST00000443443 RBMXL1Q96E39 390 aaKnown RBP2.99□□□□□ -1.93
VPS50-206ENST00000443443 PRELID3AQ96N28 172 aa2.99□□□□□ -1.93
VPS50-206ENST00000443443 CIB3Q96Q77 187 aaPredicted RBP2.99□□□□□ -1.93
VPS50-206ENST00000443443 SDF2Q99470 211 aa2.99□□□□□ -1.93
VPS50-206ENST00000443443 MIEN1Q9BRT3 115 aa2.99□□□□□ -1.93
VPS50-206ENST00000443443 TTTY13Q9BZ97 58 aa2.99□□□□□ -1.93
VPS50-206ENST00000443443 PLA2G2FQ9BZM2 168 aa2.99□□□□□ -1.93
VPS50-206ENST00000443443 Q9H521 79 aa2.99□□□□□ -1.93
VPS50-206ENST00000443443 DUSP21Q9H596 190 aa2.99□□□□□ -1.93
VPS50-206ENST00000443443 ZNF355PQ9NSJ1 428 aa2.99□□□□□ -1.93
VPS50-206ENST00000443443 TXNL4BQ9NX01 149 aaKnown RBP2.99□□□□□ -1.93
VPS50-206ENST00000443443 EPDR1Q9UM22 224 aa2.99□□□□□ -1.93
VPS50-206ENST00000443443 KDM6AO15550 1401 aaPredicted RBP2.99□□□□□ -1.93
VPS50-206ENST00000443443 MYOM3Q5VTT5 1437 aa2.99□□□□□ -1.93
VPS50-206ENST00000443443 TNS2Q63HR2 1409 aa2.99□□□□□ -1.93
VPS50-206ENST00000443443 DICER1Q9UPY3 1922 aaKnown RBP2.99□□□□□ -1.93
VPS50-206ENST00000443443 ABCC10Q5T3U5 1492 aa2.98□□□□□ -1.93
VPS50-206ENST00000443443 CHD4Q14839 1912 aa2.98□□□□□ -1.93
VPS50-206ENST00000443443 K7ERJ3 54 aa2.98□□□□□ -1.93
VPS50-206ENST00000443443 UQCRQO14949 82 aa2.98□□□□□ -1.93
VPS50-206ENST00000443443 MT-ND6P03923 174 aa2.98□□□□□ -1.93
VPS50-206ENST00000443443 ZNF286BP0CG31 522 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms