RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 SUMO1P63165 101 aaKnown RBP4.74□□□□□ -1.65
VPS50-205ENST00000441602 KIAA0141Q14154 515 aaPredicted RBP4.74□□□□□ -1.65
VPS50-205ENST00000441602 KLK9Q2XQG4 91 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 ASPHD1Q5U4P2 390 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 C19orf35Q6ZS72 473 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 TMEM219Q86XT9 240 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 HIST1H2BAQ96A08 127 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 USMG5Q96IX5 58 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 HSPB9Q9BQS6 159 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 SHANK2-AS3Q9BTD1 123 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 CHRDL1Q9BU40 450 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 RABAC1Q9UI14 185 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 KLK9Q9UKQ9 250 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 YTHDF2Q9Y5A9 579 aaKnown RBP4.74□□□□□ -1.65
VPS50-205ENST00000441602 A0A0G2JLM5 398 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 HELTA6NFD8 242 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 IGKV1-17P01599 117 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 SLC25A5P05141 298 aaKnown RBP4.74□□□□□ -1.65
VPS50-205ENST00000441602 OR10J4P0C629 311 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 NBEAP1P0C6P0 100 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 RPL7P18124 248 aaKnown RBP4.74□□□□□ -1.65
VPS50-205ENST00000441602 GNG4P50150 75 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 UBE2G1P62253 170 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 RPL23P62829 140 aaKnown RBP4.74□□□□□ -1.65
VPS50-205ENST00000441602 RNF212Q495C1 297 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 KLF17Q5JT82 389 aaPredicted RBP4.74□□□□□ -1.65
VPS50-205ENST00000441602 PATE2Q6UY27 113 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 FAM167A-AS1Q96KT0 104 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 SLC25A39Q9BZJ4 359 aaPredicted RBP4.74□□□□□ -1.65
VPS50-205ENST00000441602 GNB4Q9HAV0 340 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 ZNF580Q9UK33 172 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 ARHGAP32A7KAX9 2087 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 USP24Q9UPU5 2620 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 A0A096LNT2 108 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 SCO2A0A1W2PP80 73 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 H3BRN7 92 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 TRGV3P03979 118 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 HNF1AP20823 631 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 FLI1Q01543 452 aaPredicted RBP4.74□□□□□ -1.65
VPS50-205ENST00000441602 C5orf17Q8NAS9 161 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 GPR82Q96P67 336 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 OTORQ9NRC9 128 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 WNK2Q9Y3S1 2297 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 FREM2Q5SZK8 3169 aa4.73□□□□□ -1.65
VPS50-205ENST00000441602 TRAV5A0A0B4J249 113 aa4.73□□□□□ -1.65
VPS50-205ENST00000441602 BRI3O95415 125 aa4.73□□□□□ -1.65
VPS50-205ENST00000441602 IGHG2P01859 326 aa4.73□□□□□ -1.65
VPS50-205ENST00000441602 EGR2P11161 476 aaPredicted RBP4.73□□□□□ -1.65
VPS50-205ENST00000441602 CSN1S1P47710 185 aa4.73□□□□□ -1.65
VPS50-205ENST00000441602 KRTAP10-9P60411 292 aa4.73□□□□□ -1.65
VPS50-205ENST00000441602 C15orf32Q32M92 178 aa4.73□□□□□ -1.65
VPS50-205ENST00000441602 C9orf139Q6ZV77 190 aa4.73□□□□□ -1.65
VPS50-205ENST00000441602 LYPD1Q8N2G4 141 aa4.73□□□□□ -1.65
VPS50-205ENST00000441602 ZNF502Q8TBZ5 544 aa4.73□□□□□ -1.65
VPS50-205ENST00000441602 PRSS22Q9GZN4 317 aa4.73□□□□□ -1.65
VPS50-205ENST00000441602 AAMDCQ9H7C9 122 aa4.73□□□□□ -1.65
VPS50-205ENST00000441602 MRPL27Q9P0M9 148 aaKnown RBP4.73□□□□□ -1.65
VPS50-205ENST00000441602 DMRT1Q9Y5R6 373 aa4.73□□□□□ -1.65
VPS50-205ENST00000441602 WDFY3Q8IZQ1 3526 aa4.73□□□□□ -1.65
VPS50-205ENST00000441602 WI2-2373I1.2A0A1W2PRP0 233 aa4.73□□□□□ -1.65
VPS50-205ENST00000441602 PEX7O00628 323 aa4.73□□□□□ -1.65
VPS50-205ENST00000441602 IGF1P05019 195 aa4.73□□□□□ -1.65
VPS50-205ENST00000441602 CRYBB3P26998 211 aa4.73□□□□□ -1.65
VPS50-205ENST00000441602 SRP14P37108 136 aaKnown RBP4.73□□□□□ -1.65
VPS50-205ENST00000441602 MEOX2P50222 304 aa4.73□□□□□ -1.65
VPS50-205ENST00000441602 SLC35B1P78383 322 aa4.73□□□□□ -1.65
VPS50-205ENST00000441602 DEFB112Q30KQ8 113 aa4.73□□□□□ -1.65
VPS50-205ENST00000441602 OR10G8Q8NGN5 311 aa4.73□□□□□ -1.65
VPS50-205ENST00000441602 BLNKQ8WV28 456 aa4.73□□□□□ -1.65
VPS50-205ENST00000441602 GRAMD2BQ96HH9 432 aa4.73□□□□□ -1.65
VPS50-205ENST00000441602 NPFFR1Q9GZQ6 430 aa4.73□□□□□ -1.65
VPS50-205ENST00000441602 TMEM89A2RUT3 159 aa4.73□□□□□ -1.65
VPS50-205ENST00000441602 PYYP10082 97 aa4.73□□□□□ -1.65
VPS50-205ENST00000441602 FOLR2P14207 255 aa4.73□□□□□ -1.65
VPS50-205ENST00000441602 RAB5AP20339 215 aa4.73□□□□□ -1.65
VPS50-205ENST00000441602 GPR183P32249 361 aa4.73□□□□□ -1.65
VPS50-205ENST00000441602 TPPP2P59282 170 aa4.73□□□□□ -1.65
VPS50-205ENST00000441602 PSG9Q00887 426 aa4.73□□□□□ -1.65
VPS50-205ENST00000441602 ZNF491Q8N8L2 437 aa4.73□□□□□ -1.65
VPS50-205ENST00000441602 FXYD5Q96DB9 178 aa4.73□□□□□ -1.65
VPS50-205ENST00000441602 PSMG3-AS1Q96PY0 264 aa4.73□□□□□ -1.65
VPS50-205ENST00000441602 GSX1Q9H4S2 264 aaPredicted RBP4.73□□□□□ -1.65
VPS50-205ENST00000441602 SPTAN1Q13813 2472 aaKnown RBP4.73□□□□□ -1.65
VPS50-205ENST00000441602 AKAP6Q13023 2319 aa4.72□□□□□ -1.65
VPS50-205ENST00000441602 TRBV9A0A0B4J1U6 114 aa4.72□□□□□ -1.65
VPS50-205ENST00000441602 PGPA6NDG6 321 aa4.72□□□□□ -1.65
VPS50-205ENST00000441602 OR2T8A6NH00 312 aa4.72□□□□□ -1.65
VPS50-205ENST00000441602 FBLL1A6NHQ2 334 aaKnown RBP4.72□□□□□ -1.65
VPS50-205ENST00000441602 PF4V1P10720 104 aa4.72□□□□□ -1.65
VPS50-205ENST00000441602 BMI1P35226 326 aa4.72□□□□□ -1.65
VPS50-205ENST00000441602 GALR1P47211 349 aa4.72□□□□□ -1.65
VPS50-205ENST00000441602 PIFOQ8TCI5 191 aa4.72□□□□□ -1.65
VPS50-205ENST00000441602 MS4A10Q96PG2 267 aa4.72□□□□□ -1.65
VPS50-205ENST00000441602 METTL26Q96S19 204 aa4.72□□□□□ -1.65
VPS50-205ENST00000441602 ZNF462Q96JM2 2506 aa4.72□□□□□ -1.65
VPS50-205ENST00000441602 SERTM2A0A1B0GWG4 89 aa4.72□□□□□ -1.65
VPS50-205ENST00000441602 ZNF98A6NK75 572 aa4.72□□□□□ -1.65
VPS50-205ENST00000441602 G3V318 75 aa4.72□□□□□ -1.65
VPS50-205ENST00000441602 S100A6P06703 90 aa4.72□□□□□ -1.65
VPS50-205ENST00000441602 RPL35P42766 123 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms