RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 Q56UQ5 140 aa10.37□□□□□ -0.75
CPSF4-206ENST00000441580 UNQ5815/PRO19632Q6UWF5 114 aa10.37□□□□□ -0.75
CPSF4-206ENST00000441580 C2CD4CQ8TF44 421 aa10.37□□□□□ -0.75
CPSF4-206ENST00000441580 RNF125Q96EQ8 232 aa10.37□□□□□ -0.75
CPSF4-206ENST00000441580 IMMP2LQ96T52 175 aa10.37□□□□□ -0.75
CPSF4-206ENST00000441580 HSPB9Q9BQS6 159 aa10.37□□□□□ -0.75
CPSF4-206ENST00000441580 C7orf69Q9H7B7 122 aa10.37□□□□□ -0.75
CPSF4-206ENST00000441580 BIN3Q9NQY0 253 aa10.37□□□□□ -0.75
CPSF4-206ENST00000441580 PLXNB1O43157 2135 aa10.36□□□□□ -0.75
CPSF4-206ENST00000441580 A0A096LNT2 108 aa10.36□□□□□ -0.75
CPSF4-206ENST00000441580 A0A0U1RQK1 487 aa10.36□□□□□ -0.75
CPSF4-206ENST00000441580 H3BRN7 92 aa10.36□□□□□ -0.75
CPSF4-206ENST00000441580 PYYP10082 97 aa10.36□□□□□ -0.75
CPSF4-206ENST00000441580 EGR2P11161 476 aaPredicted RBP10.36□□□□□ -0.75
CPSF4-206ENST00000441580 GALR1P47211 349 aa10.36□□□□□ -0.75
CPSF4-206ENST00000441580 GNG4P50150 75 aa10.36□□□□□ -0.75
CPSF4-206ENST00000441580 CNN1P51911 297 aaKnown RBP10.36□□□□□ -0.75
CPSF4-206ENST00000441580 FAM210BQ96KR6 192 aa10.36□□□□□ -0.75
CPSF4-206ENST00000441580 SHANK2-AS3Q9BTD1 123 aa10.36□□□□□ -0.75
CPSF4-206ENST00000441580 SLC25A39Q9BZJ4 359 aaPredicted RBP10.36□□□□□ -0.75
CPSF4-206ENST00000441580 HIF1ANQ9NWT6 349 aa10.36□□□□□ -0.75
CPSF4-206ENST00000441580 PITPNC1Q9UKF7 332 aa10.36□□□□□ -0.75
CPSF4-206ENST00000441580 URGCP-MRPS24S4R325 110 aa10.36□□□□□ -0.75
CPSF4-206ENST00000441580 RELNP78509 3460 aa10.35□□□□□ -0.75
CPSF4-206ENST00000441580 TRBV20OR9-2A0A075B6H5 130 aa10.35□□□□□ -0.75
CPSF4-206ENST00000441580 IGHV3OR16-10A0A075B7F0 116 aa10.35□□□□□ -0.75
CPSF4-206ENST00000441580 PEX7O00628 323 aa10.35□□□□□ -0.75
CPSF4-206ENST00000441580 IGHV4-38-2P0DP08 117 aa10.35□□□□□ -0.75
CPSF4-206ENST00000441580 CRYBB3P26998 211 aa10.35□□□□□ -0.75
CPSF4-206ENST00000441580 RPS10P46783 165 aaKnown RBP10.35□□□□□ -0.75
CPSF4-206ENST00000441580 TAS2R60P59551 318 aa10.35□□□□□ -0.75
CPSF4-206ENST00000441580 LOXL1Q08397 574 aaPredicted RBP10.35□□□□□ -0.75
CPSF4-206ENST00000441580 CENPWQ5EE01 88 aa10.35□□□□□ -0.75
CPSF4-206ENST00000441580 ZNF343Q6P1L6 599 aa10.35□□□□□ -0.75
CPSF4-206ENST00000441580 BRD3OSQ6XYD6 125 aa10.35□□□□□ -0.75
CPSF4-206ENST00000441580 ZNF329Q86UD4 541 aa10.35□□□□□ -0.75
CPSF4-206ENST00000441580 NRGNQ92686 78 aa10.35□□□□□ -0.75
CPSF4-206ENST00000441580 SFRP2Q96HF1 295 aa10.35□□□□□ -0.75
CPSF4-206ENST00000441580 ATP6V0BQ99437 205 aa10.35□□□□□ -0.75
CPSF4-206ENST00000441580 TMUB1Q9BVT8 246 aa10.35□□□□□ -0.75
CPSF4-206ENST00000441580 GSX1Q9H4S2 264 aaPredicted RBP10.35□□□□□ -0.75
CPSF4-206ENST00000441580 MRPL27Q9P0M9 148 aaKnown RBP10.35□□□□□ -0.75
CPSF4-206ENST00000441580 FBXL7Q9UJT9 491 aa10.35□□□□□ -0.75
CPSF4-206ENST00000441580 CDC42EP3Q9UKI2 254 aa10.35□□□□□ -0.75
CPSF4-206ENST00000441580 CFAP46Q8IYW2 2715 aa10.35□□□□□ -0.75
CPSF4-206ENST00000441580 NBEAQ8NFP9 2946 aa10.34□□□□□ -0.75
CPSF4-206ENST00000441580 TRAV9-1A0A075B6T8 112 aa10.34□□□□□ -0.75
CPSF4-206ENST00000441580 TGIF2-C20orf24A0A0A6YYL0 155 aa10.34□□□□□ -0.75
CPSF4-206ENST00000441580 WI2-2373I1.2A0A1W2PRP0 233 aa10.34□□□□□ -0.75
CPSF4-206ENST00000441580 HELTA6NFD8 242 aa10.34□□□□□ -0.75
CPSF4-206ENST00000441580 OR2J3O76001 311 aa10.34□□□□□ -0.75
CPSF4-206ENST00000441580 IL4P05112 153 aa10.34□□□□□ -0.75
CPSF4-206ENST00000441580 S100A9P06702 114 aaKnown RBP10.34□□□□□ -0.75
CPSF4-206ENST00000441580 CXCL1P09341 107 aa10.34□□□□□ -0.75
CPSF4-206ENST00000441580 SUMO1P63165 101 aaKnown RBP10.34□□□□□ -0.75
CPSF4-206ENST00000441580 DEFB113Q30KQ7 82 aa10.34□□□□□ -0.75
CPSF4-206ENST00000441580 KLF17Q5JT82 389 aaPredicted RBP10.34□□□□□ -0.75
CPSF4-206ENST00000441580 TEX38Q6PEX7 206 aa10.34□□□□□ -0.75
CPSF4-206ENST00000441580 C5orf17Q8NAS9 161 aa10.34□□□□□ -0.75
CPSF4-206ENST00000441580 OR4F17Q8NGA8 305 aa10.34□□□□□ -0.75
CPSF4-206ENST00000441580 SMIM12Q96EX1 92 aa10.34□□□□□ -0.75
CPSF4-206ENST00000441580 ELOVL1Q9BW60 279 aa10.34□□□□□ -0.75
CPSF4-206ENST00000441580 A6NDX4 124 aa10.33□□□□□ -0.76
CPSF4-206ENST00000441580 GGCTO75223 188 aaKnown RBP10.33□□□□□ -0.76
CPSF4-206ENST00000441580 NDUFB8O95169 186 aa10.33□□□□□ -0.76
CPSF4-206ENST00000441580 S100A6P06703 90 aa10.33□□□□□ -0.76
CPSF4-206ENST00000441580 NBEAP1P0C6P0 100 aa10.33□□□□□ -0.76
CPSF4-206ENST00000441580 HIST1H1EP10412 219 aaKnown RBP10.33□□□□□ -0.76
CPSF4-206ENST00000441580 MYCNOSP40205 109 aa10.33□□□□□ -0.76
CPSF4-206ENST00000441580 BPIFA4PQ86YQ2 179 aa10.33□□□□□ -0.76
CPSF4-206ENST00000441580 NECAP1Q8NC96 275 aa10.33□□□□□ -0.76
CPSF4-206ENST00000441580 OR5T1Q8NG75 326 aa10.33□□□□□ -0.76
CPSF4-206ENST00000441580 OR10G8Q8NGN5 311 aa10.33□□□□□ -0.76
CPSF4-206ENST00000441580 ZNF502Q8TBZ5 544 aa10.33□□□□□ -0.76
CPSF4-206ENST00000441580 EEF1AKMT3Q96AZ1 226 aa10.33□□□□□ -0.76
CPSF4-206ENST00000441580 IGF2BP2-AS1Q96M15 143 aa10.33□□□□□ -0.76
CPSF4-206ENST00000441580 PYGO2Q9BRQ0 406 aa10.33□□□□□ -0.76
CPSF4-206ENST00000441580 OTORQ9NRC9 128 aa10.33□□□□□ -0.76
CPSF4-206ENST00000441580 SMG1Q96Q15 3661 aaKnown RBP10.33□□□□□ -0.76
CPSF4-206ENST00000441580 WNK2Q9Y3S1 2297 aa10.32□□□□□ -0.76
CPSF4-206ENST00000441580 TRBV9A0A0B4J1U6 114 aa10.32□□□□□ -0.76
CPSF4-206ENST00000441580 FAM223BA6NKX1 122 aa10.32□□□□□ -0.76
CPSF4-206ENST00000441580 F8W735 103 aaPredicted RBP10.32□□□□□ -0.76
CPSF4-206ENST00000441580 H3BUA1 57 aa10.32□□□□□ -0.76
CPSF4-206ENST00000441580 PFN1P07737 140 aaKnown RBP10.32□□□□□ -0.76
CPSF4-206ENST00000441580 FAM3BP58499 235 aaPredicted RBP10.32□□□□□ -0.76
CPSF4-206ENST00000441580 RHOGP84095 191 aa10.32□□□□□ -0.76
CPSF4-206ENST00000441580 ZNF600Q6ZNG1 722 aa10.32□□□□□ -0.76
CPSF4-206ENST00000441580 TMEM219Q86XT9 240 aa10.32□□□□□ -0.76
CPSF4-206ENST00000441580 FAM223AQ8IWN6 122 aa10.32□□□□□ -0.76
CPSF4-206ENST00000441580 ZFP82Q8N141 532 aa10.32□□□□□ -0.76
CPSF4-206ENST00000441580 ZNF491Q8N8L2 437 aa10.32□□□□□ -0.76
CPSF4-206ENST00000441580 MBD6Q96DN6 1003 aa10.32□□□□□ -0.76
CPSF4-206ENST00000441580 ATG101Q9BSB4 218 aa10.32□□□□□ -0.76
CPSF4-206ENST00000441580 USP9XQ93008 2570 aaPredicted RBP10.31□□□□□ -0.76
CPSF4-206ENST00000441580 TRBV7-1A0A0A6YYK4 115 aa10.31□□□□□ -0.76
CPSF4-206ENST00000441580 TRAV41A0A0B4J266 112 aa10.31□□□□□ -0.76
CPSF4-206ENST00000441580 PPP5D1E7EU14 171 aa10.31□□□□□ -0.76
CPSF4-206ENST00000441580 H3BUX3 64 aa10.31□□□□□ -0.76
CPSF4-206ENST00000441580 BMPR1BO00238 502 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms