RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 ICAM4Q14773 271 aa14.86□□□□□ -0.03
SNX17-203ENST00000440760 ZNF502Q8TBZ5 544 aa14.86□□□□□ -0.03
SNX17-203ENST00000440760 CCDC140Q96MF4 163 aa14.86□□□□□ -0.03
SNX17-203ENST00000440760 TRAV5A0A0B4J249 113 aa14.85□□□□□ -0.03
SNX17-203ENST00000440760 LOC102723971A0A1B0GUV8 181 aa14.85□□□□□ -0.03
SNX17-203ENST00000440760 TMEM218A2RU14 115 aa14.85□□□□□ -0.03
SNX17-203ENST00000440760 LY6G6DO95868 133 aa14.85□□□□□ -0.03
SNX17-203ENST00000440760 TRGV3P03979 118 aa14.85□□□□□ -0.03
SNX17-203ENST00000440760 SFTA3P0C7M3 94 aa14.85□□□□□ -0.03
SNX17-203ENST00000440760 BCL2P10415 239 aa14.85□□□□□ -0.03
SNX17-203ENST00000440760 HNF1AP20823 631 aa14.85□□□□□ -0.03
SNX17-203ENST00000440760 C10orf113Q5VZT2 155 aa14.85□□□□□ -0.03
SNX17-203ENST00000440760 ZNF329Q86UD4 541 aa14.85□□□□□ -0.03
SNX17-203ENST00000440760 VN1R17PQ8TDU5 208 aa14.85□□□□□ -0.03
SNX17-203ENST00000440760 CHRDL1Q9BU40 450 aa14.85□□□□□ -0.03
SNX17-203ENST00000440760 ZNF702PQ9H963 129 aa14.85□□□□□ -0.03
SNX17-203ENST00000440760 DNAJC4Q9NNZ3 241 aa14.85□□□□□ -0.03
SNX17-203ENST00000440760 HIVEP2P31629 2446 aa14.85□□□□□ -0.03
SNX17-203ENST00000440760 RD3LP0DJH9 198 aa14.85□□□□□ -0.03
SNX17-203ENST00000440760 TPPP2P59282 170 aa14.85□□□□□ -0.03
SNX17-203ENST00000440760 C10orf99Q6UWK7 81 aa14.85□□□□□ -0.03
SNX17-203ENST00000440760 KLK15Q9H2R5 256 aa14.85□□□□□ -0.03
SNX17-203ENST00000440760 DNAJC9-AS1A6NH13 148 aa14.84□□□□□ -0.03
SNX17-203ENST00000440760 CFHR3Q02985 330 aa14.84□□□□□ -0.03
SNX17-203ENST00000440760 PEA15Q15121 130 aa14.84□□□□□ -0.03
SNX17-203ENST00000440760 ZNF506Q5JVG8 444 aa14.84□□□□□ -0.03
SNX17-203ENST00000440760 Q71RC1 249 aaPredicted RBP14.84□□□□□ -0.03
SNX17-203ENST00000440760 OR1L4Q8NGR5 311 aa14.84□□□□□ -0.03
SNX17-203ENST00000440760 PFDN5Q99471 154 aa14.84□□□□□ -0.03
SNX17-203ENST00000440760 NPFFR1Q9GZQ6 430 aa14.84□□□□□ -0.03
SNX17-203ENST00000440760 ESM1Q9NQ30 184 aa14.84□□□□□ -0.03
SNX17-203ENST00000440760 IGHV3-35A0A0C4DH35 117 aa14.84□□□□□ -0.03
SNX17-203ENST00000440760 PF4V1P10720 104 aa14.84□□□□□ -0.03
SNX17-203ENST00000440760 ADMP35318 185 aa14.84□□□□□ -0.03
SNX17-203ENST00000440760 UBE2G2P60604 165 aa14.84□□□□□ -0.03
SNX17-203ENST00000440760 LINC00305Q7Z4B0 112 aa14.84□□□□□ -0.03
SNX17-203ENST00000440760 ZNF503Q96F45 646 aa14.84□□□□□ -0.03
SNX17-203ENST00000440760 CXorf1O96002 111 aa14.83□□□□□ -0.04
SNX17-203ENST00000440760 TOMM40O96008 361 aa14.83□□□□□ -0.04
SNX17-203ENST00000440760 CTSGP08311 255 aa14.83□□□□□ -0.04
SNX17-203ENST00000440760 CLEC19AQ6UXS0 136 aa14.83□□□□□ -0.04
SNX17-203ENST00000440760 RBMS3Q6XE24 437 aaKnown RBP14.83□□□□□ -0.04
SNX17-203ENST00000440760 OR51G1Q8NGK1 321 aa14.83□□□□□ -0.04
SNX17-203ENST00000440760 SLC25A2Q9BXI2 301 aa14.83□□□□□ -0.04
SNX17-203ENST00000440760 PRSS22Q9GZN4 317 aa14.83□□□□□ -0.04
SNX17-203ENST00000440760 BAHCC1Q9P281 2608 aa14.83□□□□□ -0.04
SNX17-203ENST00000440760 OR7C2O60412 319 aa14.82□□□□□ -0.04
SNX17-203ENST00000440760 IL4P05112 153 aa14.82□□□□□ -0.04
SNX17-203ENST00000440760 GCHFRP30047 84 aa14.82□□□□□ -0.04
SNX17-203ENST00000440760 ATP5G2Q06055 141 aa14.82□□□□□ -0.04
SNX17-203ENST00000440760 KIAA0141Q14154 515 aaPredicted RBP14.82□□□□□ -0.04
SNX17-203ENST00000440760 EEF1AKMT3Q96AZ1 226 aa14.82□□□□□ -0.04
SNX17-203ENST00000440760 C19orf24Q9BVV8 132 aa14.82□□□□□ -0.04
SNX17-203ENST00000440760 MRPL32Q9BYC8 188 aaKnown RBP14.82□□□□□ -0.04
SNX17-203ENST00000440760 HIVEP1P15822 2718 aa14.82□□□□□ -0.04
SNX17-203ENST00000440760 TRAV30A0A087WSZ9 112 aa14.82□□□□□ -0.04
SNX17-203ENST00000440760 FAM223BA6NKX1 122 aa14.82□□□□□ -0.04
SNX17-203ENST00000440760 F8W036 122 aa14.82□□□□□ -0.04
SNX17-203ENST00000440760 PAGE4O60829 102 aa14.82□□□□□ -0.04
SNX17-203ENST00000440760 HYPMO75409 117 aa14.82□□□□□ -0.04
SNX17-203ENST00000440760 IFNA1P01562 189 aa14.82□□□□□ -0.04
SNX17-203ENST00000440760 CLEC3BP05452 202 aa14.82□□□□□ -0.04
SNX17-203ENST00000440760 OR10J4P0C629 311 aa14.82□□□□□ -0.04
SNX17-203ENST00000440760 CEBPGP53567 150 aa14.82□□□□□ -0.04
SNX17-203ENST00000440760 LEMD1Q68G75 181 aa14.82□□□□□ -0.04
SNX17-203ENST00000440760 FAM223AQ8IWN6 122 aa14.82□□□□□ -0.04
SNX17-203ENST00000440760 OR5AU1Q8NGC0 362 aa14.82□□□□□ -0.04
SNX17-203ENST00000440760 FAM167A-AS1Q96KT0 104 aa14.82□□□□□ -0.04
SNX17-203ENST00000440760 TECRQ9NZ01 308 aaKnown RBP14.82□□□□□ -0.04
SNX17-203ENST00000440760 IGHV3OR16-8A0A075B7F1 116 aa14.81□□□□□ -0.04
SNX17-203ENST00000440760 IGLV1-40P01703 118 aa14.81□□□□□ -0.04
SNX17-203ENST00000440760 APOC3P02656 99 aa14.81□□□□□ -0.04
SNX17-203ENST00000440760 C8orf88P0DMB2 117 aa14.81□□□□□ -0.04
SNX17-203ENST00000440760 FCGR2BP31994 310 aaPredicted RBP14.81□□□□□ -0.04
SNX17-203ENST00000440760 RNF125Q96EQ8 232 aa14.81□□□□□ -0.04
SNX17-203ENST00000440760 ZNF414Q96IQ9 312 aa14.81□□□□□ -0.04
SNX17-203ENST00000440760 GNB4Q9HAV0 340 aa14.81□□□□□ -0.04
SNX17-203ENST00000440760 ELOA3CA0A087WX78 387 aaPredicted RBP14.8□□□□□ -0.04
SNX17-203ENST00000440760 IGHV3-11P01762 117 aa14.8□□□□□ -0.04
SNX17-203ENST00000440760 FABP1P07148 127 aa14.8□□□□□ -0.04
SNX17-203ENST00000440760 SNRPCP09234 159 aaKnown RBP14.8□□□□□ -0.04
SNX17-203ENST00000440760 PYYP10082 97 aa14.8□□□□□ -0.04
SNX17-203ENST00000440760 PLP1P60201 277 aa14.8□□□□□ -0.04
SNX17-203ENST00000440760 YPEL3P61236 119 aaPredicted RBP14.8□□□□□ -0.04
SNX17-203ENST00000440760 USF2Q15853 346 aaPredicted RBP14.8□□□□□ -0.04
SNX17-203ENST00000440760 KHDC3LQ587J8 217 aa14.8□□□□□ -0.04
SNX17-203ENST00000440760 ZNF491Q8N8L2 437 aa14.8□□□□□ -0.04
SNX17-203ENST00000440760 TXN2Q99757 166 aa14.8□□□□□ -0.04
SNX17-203ENST00000440760 HIGD1AQ9Y241 93 aa14.8□□□□□ -0.04
SNX17-203ENST00000440760 PPP5D1E7EU14 171 aa14.8□□□□□ -0.04
SNX17-203ENST00000440760 NUPL2O15504 423 aaKnown RBP14.8□□□□□ -0.04
SNX17-203ENST00000440760 SRP19P09132 144 aaKnown RBP14.8□□□□□ -0.04
SNX17-203ENST00000440760 PSMB3P49720 205 aa14.8□□□□□ -0.04
SNX17-203ENST00000440760 TMEM86BQ8N661 226 aa14.8□□□□□ -0.04
SNX17-203ENST00000440760 CYB561D1Q8N8Q1 229 aa14.8□□□□□ -0.04
SNX17-203ENST00000440760 RNF2Q99496 336 aa14.8□□□□□ -0.04
SNX17-203ENST00000440760 MANBALQ9NQG1 85 aa14.8□□□□□ -0.04
SNX17-203ENST00000440760 VAX2Q9UIW0 290 aa14.8□□□□□ -0.04
SNX17-203ENST00000440760 ZNF580Q9UK33 172 aa14.8□□□□□ -0.04
SNX17-203ENST00000440760 PUS1Q9Y606 427 aaKnown RBP eCLIP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms