RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 A0A1W2PS18 150 aa13.5□□□□□ -0.25
CPSF4-205ENST00000440514 C7orf66A4D0T2 115 aa13.5□□□□□ -0.25
CPSF4-205ENST00000440514 PMS2P5A8MQ11 134 aa13.5□□□□□ -0.25
CPSF4-205ENST00000440514 PET100P0DJ07 73 aa13.5□□□□□ -0.25
CPSF4-205ENST00000440514 RD3LP0DJH9 198 aa13.5□□□□□ -0.25
CPSF4-205ENST00000440514 PSG1P11464 419 aa13.5□□□□□ -0.25
CPSF4-205ENST00000440514 NPPCP23582 126 aa13.5□□□□□ -0.25
CPSF4-205ENST00000440514 ZNF90Q03938 601 aa13.5□□□□□ -0.25
CPSF4-205ENST00000440514 AKR1C1Q04828 323 aa13.5□□□□□ -0.25
CPSF4-205ENST00000440514 LILRB2Q8N423 598 aa13.5□□□□□ -0.25
CPSF4-205ENST00000440514 DEFB125Q8N687 156 aa13.5□□□□□ -0.25
CPSF4-205ENST00000440514 OR10P1Q8NGE3 313 aa13.5□□□□□ -0.25
CPSF4-205ENST00000440514 GGACTQ9BVM4 153 aa13.5□□□□□ -0.25
CPSF4-205ENST00000440514 FNDC10F2Z333 226 aa13.49□□□□□ -0.25
CPSF4-205ENST00000440514 CRYBB3P26998 211 aa13.49□□□□□ -0.25
CPSF4-205ENST00000440514 NUP62P37198 522 aaPredicted RBP13.49□□□□□ -0.25
CPSF4-205ENST00000440514 IL15RAQ13261 267 aa13.49□□□□□ -0.25
CPSF4-205ENST00000440514 RAB32Q13637 225 aa13.49□□□□□ -0.25
CPSF4-205ENST00000440514 TCF24Q7RTU0 167 aa13.49□□□□□ -0.25
CPSF4-205ENST00000440514 THAP8Q8NA92 274 aa13.49□□□□□ -0.25
CPSF4-205ENST00000440514 C19orf73Q9NVV2 129 aa13.49□□□□□ -0.25
CPSF4-205ENST00000440514 SMCO3A2RU48 225 aa13.48□□□□□ -0.25
CPSF4-205ENST00000440514 A8MZ25 164 aa13.48□□□□□ -0.25
CPSF4-205ENST00000440514 OR11H12B2RN74 326 aa13.48□□□□□ -0.25
CPSF4-205ENST00000440514 TFPI2P48307 235 aa13.48□□□□□ -0.25
CPSF4-205ENST00000440514 RRAS2P62070 204 aaPredicted RBP13.48□□□□□ -0.25
CPSF4-205ENST00000440514 OR2F1Q13607 317 aa13.48□□□□□ -0.25
CPSF4-205ENST00000440514 FAM90A2PQ658T7 463 aa13.48□□□□□ -0.25
CPSF4-205ENST00000440514 SBSPONQ8IVN8 264 aa13.48□□□□□ -0.25
CPSF4-205ENST00000440514 OR51G1Q8NGK1 321 aa13.48□□□□□ -0.25
CPSF4-205ENST00000440514 ASB13Q8WXK3 278 aa13.48□□□□□ -0.25
CPSF4-205ENST00000440514 RNF125Q96EQ8 232 aa13.48□□□□□ -0.25
CPSF4-205ENST00000440514 TRGV9Q99603 122 aa13.48□□□□□ -0.25
CPSF4-205ENST00000440514 C11orf1Q9H5F2 150 aa13.48□□□□□ -0.25
CPSF4-205ENST00000440514 UBQLN2Q9UHD9 624 aa13.48□□□□□ -0.25
CPSF4-205ENST00000440514 OR4C46A6NHA9 309 aa13.47□□□□□ -0.25
CPSF4-205ENST00000440514 DFFBO76075 338 aa13.47□□□□□ -0.25
CPSF4-205ENST00000440514 HNRNPCP07910 306 aaKnown RBP eCLIP13.47□□□□□ -0.25
CPSF4-205ENST00000440514 P2RY1P47900 373 aa13.47□□□□□ -0.25
CPSF4-205ENST00000440514 S100A7AQ86SG5 101 aa13.47□□□□□ -0.25
CPSF4-205ENST00000440514 GBGT1Q8N5D6 347 aa13.47□□□□□ -0.25
CPSF4-205ENST00000440514 GRAMD2BQ96HH9 432 aa13.47□□□□□ -0.25
CPSF4-205ENST00000440514 PBDC1Q9BVG4 233 aa13.47□□□□□ -0.25
CPSF4-205ENST00000440514 TUBA4BQ9H853 241 aa13.47□□□□□ -0.25
CPSF4-205ENST00000440514 SRD5A3Q9H8P0 318 aa13.47□□□□□ -0.25
CPSF4-205ENST00000440514 MGAT4CQ9UBM8 478 aa13.47□□□□□ -0.25
CPSF4-205ENST00000440514 EIF2B2P49770 351 aaKnown RBP13.46□□□□□ -0.25
CPSF4-205ENST00000440514 BCAP31P51572 246 aa13.46□□□□□ -0.25
CPSF4-205ENST00000440514 CAV2P51636 162 aa13.46□□□□□ -0.25
CPSF4-205ENST00000440514 LYZP61626 148 aa13.46□□□□□ -0.25
CPSF4-205ENST00000440514 HBG1P69891 147 aa13.46□□□□□ -0.25
CPSF4-205ENST00000440514 HBG2P69892 147 aa13.46□□□□□ -0.25
CPSF4-205ENST00000440514 DLK1P80370 383 aa13.46□□□□□ -0.25
CPSF4-205ENST00000440514 ARL16Q0P5N6 197 aa13.46□□□□□ -0.25
CPSF4-205ENST00000440514 ODF3L2Q3SX64 289 aa13.46□□□□□ -0.25
CPSF4-205ENST00000440514 STX12Q86Y82 276 aa13.46□□□□□ -0.25
CPSF4-205ENST00000440514 U3KQE9 123 aa13.46□□□□□ -0.25
CPSF4-205ENST00000440514 FAM24AA6NFZ4 105 aa13.45□□□□□ -0.26
CPSF4-205ENST00000440514 PAFAH1B2P68402 229 aa13.45□□□□□ -0.26
CPSF4-205ENST00000440514 SLC25A31Q9H0C2 315 aa13.45□□□□□ -0.26
CPSF4-205ENST00000440514 NPVFQ9HCQ7 196 aa13.45□□□□□ -0.26
CPSF4-205ENST00000440514 RABAC1Q9UI14 185 aa13.45□□□□□ -0.26
CPSF4-205ENST00000440514 ALG5Q9Y673 324 aa13.45□□□□□ -0.26
CPSF4-205ENST00000440514 E5RGE8 158 aa13.44□□□□□ -0.26
CPSF4-205ENST00000440514 GATA2P23769 480 aaPredicted RBP13.44□□□□□ -0.26
CPSF4-205ENST00000440514 CMC4P56277 68 aaPredicted RBP13.44□□□□□ -0.26
CPSF4-205ENST00000440514 H2BFSP57053 126 aa13.44□□□□□ -0.26
CPSF4-205ENST00000440514 SELENOTP62341 195 aa13.44□□□□□ -0.26
CPSF4-205ENST00000440514 RPL11P62913 178 aaKnown RBP13.44□□□□□ -0.26
CPSF4-205ENST00000440514 LRRC37A5PQ49AS3 106 aa13.44□□□□□ -0.26
CPSF4-205ENST00000440514 TMEM144Q7Z5S9 345 aa13.44□□□□□ -0.26
CPSF4-205ENST00000440514 WFDC3Q8IUB2 231 aa13.44□□□□□ -0.26
CPSF4-205ENST00000440514 GLMPQ8WWB7 406 aa13.44□□□□□ -0.26
CPSF4-205ENST00000440514 CITED4Q96RK1 184 aa13.44□□□□□ -0.26
CPSF4-205ENST00000440514 MED28Q9H204 178 aa13.44□□□□□ -0.26
CPSF4-205ENST00000440514 MS4A6AQ9H2W1 248 aa13.44□□□□□ -0.26
CPSF4-205ENST00000440514 LYRM2Q9NU23 88 aaPredicted RBP13.44□□□□□ -0.26
CPSF4-205ENST00000440514 RNF24Q9Y225 148 aa13.44□□□□□ -0.26
CPSF4-205ENST00000440514 IGSF23A1L1A6 192 aa13.43□□□□□ -0.26
CPSF4-205ENST00000440514 RBMY1BA6NDE4 496 aaKnown RBP13.43□□□□□ -0.26
CPSF4-205ENST00000440514 RBMY1EA6NEQ0 496 aaKnown RBP13.43□□□□□ -0.26
CPSF4-205ENST00000440514 DEDDO75618 318 aa13.43□□□□□ -0.26
CPSF4-205ENST00000440514 CST7O76096 145 aa13.43□□□□□ -0.26
CPSF4-205ENST00000440514 RBMY1DP0C7P1 496 aaKnown RBP13.43□□□□□ -0.26
CPSF4-205ENST00000440514 S100A11P31949 105 aa13.43□□□□□ -0.26
CPSF4-205ENST00000440514 AP2S1P53680 142 aaPredicted RBP13.43□□□□□ -0.26
CPSF4-205ENST00000440514 SLC38A11Q08AI6 406 aa13.43□□□□□ -0.26
CPSF4-205ENST00000440514 RAB31Q13636 194 aa13.43□□□□□ -0.26
CPSF4-205ENST00000440514 ATP6V1FQ16864 119 aa13.43□□□□□ -0.26
CPSF4-205ENST00000440514 C16orf54Q6UWD8 224 aa13.43□□□□□ -0.26
CPSF4-205ENST00000440514 TMEM182Q6ZP80 229 aaPredicted RBP13.43□□□□□ -0.26
CPSF4-205ENST00000440514 STXBP6Q8NFX7 210 aa13.43□□□□□ -0.26
CPSF4-205ENST00000440514 NHLRC4P0CG21 123 aaPredicted RBP13.42□□□□□ -0.26
CPSF4-205ENST00000440514 SULT1A1P50225 295 aa13.42□□□□□ -0.26
CPSF4-205ENST00000440514 FGL1Q08830 312 aa13.42□□□□□ -0.26
CPSF4-205ENST00000440514 OXA1LQ15070 435 aa13.42□□□□□ -0.26
CPSF4-205ENST00000440514 TMEM217Q8N7C4 229 aa13.42□□□□□ -0.26
CPSF4-205ENST00000440514 STPG3Q8N7X2 389 aa13.42□□□□□ -0.26
CPSF4-205ENST00000440514 HELTA6NFD8 242 aa13.41□□□□□ -0.26
CPSF4-205ENST00000440514 DNASE2O00115 360 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms