RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 RAX2Q96IS3 184 aa12.13□□□□□ -0.47
PCNX1-202ENST00000439984 PTPRZ1P23471 2315 aaPredicted RBP12.13□□□□□ -0.47
PCNX1-202ENST00000439984 SAA2-SAA4A0A096LPE2 208 aa12.13□□□□□ -0.47
PCNX1-202ENST00000439984 PRSS47A8MTI9 375 aa12.13□□□□□ -0.47
PCNX1-202ENST00000439984 K7ERJ3 54 aa12.13□□□□□ -0.47
PCNX1-202ENST00000439984 NUPR1O60356 82 aa12.13□□□□□ -0.47
PCNX1-202ENST00000439984 SAA2P0DJI9 122 aaPredicted RBP12.13□□□□□ -0.47
PCNX1-202ENST00000439984 SLAQ13239 276 aa12.13□□□□□ -0.47
PCNX1-202ENST00000439984 ANXA2RQ3ZCQ2 193 aa12.13□□□□□ -0.47
PCNX1-202ENST00000439984 ASCL4Q6XD76 172 aa12.13□□□□□ -0.47
PCNX1-202ENST00000439984 VWCEQ96DN2 955 aa12.13□□□□□ -0.47
PCNX1-202ENST00000439984 ZC2HC1AQ96GY0 325 aa12.13□□□□□ -0.47
PCNX1-202ENST00000439984 WBP1Q96G27 269 aa12.13□□□□□ -0.47
PCNX1-202ENST00000439984 MRPL20Q9BYC9 149 aaKnown RBP12.13□□□□□ -0.47
PCNX1-202ENST00000439984 IGHV2-70DA0A0C4DH43 119 aa12.13□□□□□ -0.47
PCNX1-202ENST00000439984 A0A1W2PPM0 123 aa12.13□□□□□ -0.47
PCNX1-202ENST00000439984 C9JAW5 83 aa12.13□□□□□ -0.47
PCNX1-202ENST00000439984 SS18L1O75177 396 aaPredicted RBP12.12□□□□□ -0.47
PCNX1-202ENST00000439984 CELA3AP09093 270 aa12.12□□□□□ -0.47
PCNX1-202ENST00000439984 RFPL3SP0C7P2 107 aa12.12□□□□□ -0.47
PCNX1-202ENST00000439984 ID1P41134 155 aa12.12□□□□□ -0.47
PCNX1-202ENST00000439984 KLF12Q9Y4X4 402 aa12.12□□□□□ -0.47
PCNX1-202ENST00000439984 LRRK1Q38SD2 2015 aa12.12□□□□□ -0.47
PCNX1-202ENST00000439984 TRIOBPQ9H2D6 2365 aa12.12□□□□□ -0.47
PCNX1-202ENST00000439984 TRAV3A0A0B4J244 114 aa12.12□□□□□ -0.47
PCNX1-202ENST00000439984 SRSF6Q13247 344 aaKnown RBP12.12□□□□□ -0.47
PCNX1-202ENST00000439984 C9orf153Q5TBE3 101 aa12.12□□□□□ -0.47
PCNX1-202ENST00000439984 EXOC3-AS1Q8N2X6 119 aa12.12□□□□□ -0.47
PCNX1-202ENST00000439984 MED12Q93074 2177 aa12.12□□□□□ -0.47
PCNX1-202ENST00000439984 DOCK9Q9BZ29 2069 aa12.12□□□□□ -0.47
PCNX1-202ENST00000439984 FAM90A27PA6NNH2 459 aa12.12□□□□□ -0.47
PCNX1-202ENST00000439984 THSD7BQ9C0I4 1608 aa12.12□□□□□ -0.47
PCNX1-202ENST00000439984 FBXL15Q9H469 300 aa12.12□□□□□ -0.47
PCNX1-202ENST00000439984 TCRBV4S1A1TA0A5B7 111 aa12.11□□□□□ -0.47
PCNX1-202ENST00000439984 H3BMG7 143 aa12.11□□□□□ -0.47
PCNX1-202ENST00000439984 LY96Q9Y6Y9 160 aa12.11□□□□□ -0.47
PCNX1-202ENST00000439984 FANCMQ8IYD8 2048 aa12.11□□□□□ -0.47
PCNX1-202ENST00000439984 UPK2O00526 184 aa12.11□□□□□ -0.47
PCNX1-202ENST00000439984 LINC00271P0C7V0 271 aa12.11□□□□□ -0.47
PCNX1-202ENST00000439984 LYZL1Q6UWQ5 148 aa12.11□□□□□ -0.47
PCNX1-202ENST00000439984 FGFBP3Q8TAT2 258 aa12.11□□□□□ -0.47
PCNX1-202ENST00000439984 RAB1BQ9H0U4 201 aa12.11□□□□□ -0.47
PCNX1-202ENST00000439984 A0A0U1RRA0 63 aa12.11□□□□□ -0.47
PCNX1-202ENST00000439984 YPEL3P61236 119 aaPredicted RBP12.11□□□□□ -0.47
PCNX1-202ENST00000439984 C2orf82Q6UX34 121 aa12.11□□□□□ -0.47
PCNX1-202ENST00000439984 COPS9Q8WXC6 57 aa12.11□□□□□ -0.47
PCNX1-202ENST00000439984 FNDC1Q4ZHG4 1894 aaPredicted RBP12.11□□□□□ -0.47
PCNX1-202ENST00000439984 LOC102723996A0A087X1L8 192 aa12.11□□□□□ -0.47
PCNX1-202ENST00000439984 UBE2L6O14933 153 aa12.11□□□□□ -0.47
PCNX1-202ENST00000439984 CD69Q07108 199 aa12.11□□□□□ -0.47
PCNX1-202ENST00000439984 VWC2Q2TAL6 325 aa12.11□□□□□ -0.47
PCNX1-202ENST00000439984 RAB1CQ92928 201 aa12.11□□□□□ -0.47
PCNX1-202ENST00000439984 NPIPB5A8MRT5 1133 aa12.1□□□□□ -0.47
PCNX1-202ENST00000439984 TIAF1O95411 115 aa12.1□□□□□ -0.47
PCNX1-202ENST00000439984 MYOD1P15172 320 aa12.1□□□□□ -0.47
PCNX1-202ENST00000439984 DUTP33316 252 aaKnown RBP12.1□□□□□ -0.47
PCNX1-202ENST00000439984 FHL1Q13642 323 aa12.1□□□□□ -0.47
PCNX1-202ENST00000439984 AMTNQ6UX39 209 aa12.1□□□□□ -0.47
PCNX1-202ENST00000439984 SLC25A48Q6ZT89 311 aaKnown RBP12.1□□□□□ -0.47
PCNX1-202ENST00000439984 OSR1Q8TAX0 266 aaPredicted RBP12.1□□□□□ -0.47
PCNX1-202ENST00000439984 DOCK8Q8NF50 2099 aa12.1□□□□□ -0.47
PCNX1-202ENST00000439984 TCRAP04437 139 aa12.1□□□□□ -0.47
PCNX1-202ENST00000439984 ASIPP42127 132 aa12.1□□□□□ -0.47
PCNX1-202ENST00000439984 FAM214BQ7L5A3 538 aa12.1□□□□□ -0.47
PCNX1-202ENST00000439984 AHCTF1Q8WYP5 2266 aa12.1□□□□□ -0.47
PCNX1-202ENST00000439984 ABCA7Q8IZY2 2146 aa12.1□□□□□ -0.47
PCNX1-202ENST00000439984 Q8NFD4 153 aa12.1□□□□□ -0.47
PCNX1-202ENST00000439984 CHCHD2Q9Y6H1 151 aaPredicted RBP12.1□□□□□ -0.47
PCNX1-202ENST00000439984 IGHV1-24A0A0C4DH33 117 aa12.09□□□□□ -0.47
PCNX1-202ENST00000439984 IGKV1D-33P01593 117 aa12.09□□□□□ -0.47
PCNX1-202ENST00000439984 IGKV1-33P01594 117 aa12.09□□□□□ -0.47
PCNX1-202ENST00000439984 PRB3Q04118 309 aaPredicted RBP12.09□□□□□ -0.47
PCNX1-202ENST00000439984 FAM159AQ6UWV7 190 aa12.09□□□□□ -0.47
PCNX1-202ENST00000439984 UBALD2Q8IYN6 164 aa12.09□□□□□ -0.47
PCNX1-202ENST00000439984 BOD1L2Q8IYS8 172 aa12.09□□□□□ -0.47
PCNX1-202ENST00000439984 DEFB123Q8N688 67 aa12.09□□□□□ -0.47
PCNX1-202ENST00000439984 CELA3BP08861 270 aa12.09□□□□□ -0.47
PCNX1-202ENST00000439984 PAX9P55771 341 aa12.09□□□□□ -0.47
PCNX1-202ENST00000439984 KIAA2026Q5HYC2 2103 aa12.09□□□□□ -0.47
PCNX1-202ENST00000439984 MORN2Q502X0 79 aa12.09□□□□□ -0.47
PCNX1-202ENST00000439984 AMN1Q8IY45 258 aa12.09□□□□□ -0.47
PCNX1-202ENST00000439984 SMPXQ9UHP9 88 aa12.09□□□□□ -0.47
PCNX1-202ENST00000439984 MRPS18CQ9Y3D5 142 aaKnown RBP12.09□□□□□ -0.47
PCNX1-202ENST00000439984 C15orf62A8K5M9 175 aa12.08□□□□□ -0.47
PCNX1-202ENST00000439984 FABP5P3A8MUU1 101 aa12.08□□□□□ -0.47
PCNX1-202ENST00000439984 F8W1H4 67 aa12.08□□□□□ -0.47
PCNX1-202ENST00000439984 COX8AP10176 69 aa12.08□□□□□ -0.47
PCNX1-202ENST00000439984 LAGE3Q14657 143 aa12.08□□□□□ -0.47
PCNX1-202ENST00000439984 TRBV7-9A0A0J9YWB2 115 aa12.08□□□□□ -0.48
PCNX1-202ENST00000439984 FAM216BQ8N7L0 139 aa12.08□□□□□ -0.48
PCNX1-202ENST00000439984 PLA2G2EQ9NZK7 142 aa12.08□□□□□ -0.48
PCNX1-202ENST00000439984 PAPPA-AS1Q5QFB9 102 aa12.08□□□□□ -0.48
PCNX1-202ENST00000439984 SMIM20Q8N5G0 67 aa12.08□□□□□ -0.48
PCNX1-202ENST00000439984 TMEM158Q8WZ71 300 aa12.08□□□□□ -0.48
PCNX1-202ENST00000439984 NPFFR1Q9GZQ6 430 aa12.08□□□□□ -0.48
PCNX1-202ENST00000439984 IGHV3OR16-12A0A075B7B8 117 aa12.08□□□□□ -0.48
PCNX1-202ENST00000439984 TRAV40A0A0B4J280 105 aa12.08□□□□□ -0.48
PCNX1-202ENST00000439984 MLNRO43193 412 aa12.08□□□□□ -0.48
PCNX1-202ENST00000439984 HIST1H4AP62805 103 aaKnown RBP12.08□□□□□ -0.48
PCNX1-202ENST00000439984 PLAURQ03405 335 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms