RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 IGHV4-30-4P0DP06 118 aa8.86□□□□□ -0.99
HSPG2-206ENST00000439717 S100A10P60903 97 aa8.86□□□□□ -0.99
HSPG2-206ENST00000439717 ZNF90Q03938 601 aa8.86□□□□□ -0.99
HSPG2-206ENST00000439717 AKR1C1Q04828 323 aa8.86□□□□□ -0.99
HSPG2-206ENST00000439717 RAB32Q13637 225 aa8.86□□□□□ -0.99
HSPG2-206ENST00000439717 FAM90A2PQ658T7 463 aa8.86□□□□□ -0.99
HSPG2-206ENST00000439717 TMEM144Q7Z5S9 345 aa8.86□□□□□ -0.99
HSPG2-206ENST00000439717 GRAMD2BQ96HH9 432 aa8.86□□□□□ -0.99
HSPG2-206ENST00000439717 C19orf73Q9NVV2 129 aa8.86□□□□□ -0.99
HSPG2-206ENST00000439717 RABAC1Q9UI14 185 aa8.86□□□□□ -0.99
HSPG2-206ENST00000439717 U3KQE9 123 aa8.86□□□□□ -0.99
HSPG2-206ENST00000439717 IGKV1OR2-108A0A075B7D4 117 aa8.85□□□□□ -0.99
HSPG2-206ENST00000439717 IGHV3OR16-13A0A075B7E8 117 aa8.85□□□□□ -0.99
HSPG2-206ENST00000439717 IGHV3-74A0A0B4J1X5 117 aa8.85□□□□□ -0.99
HSPG2-206ENST00000439717 OR4C46A6NHA9 309 aa8.85□□□□□ -0.99
HSPG2-206ENST00000439717 DEDDO75618 318 aa8.85□□□□□ -0.99
HSPG2-206ENST00000439717 SIX6O95475 246 aa8.85□□□□□ -0.99
HSPG2-206ENST00000439717 FRMD6-AS1P0C7T7 363 aa8.85□□□□□ -0.99
HSPG2-206ENST00000439717 NUP62P37198 522 aaPredicted RBP8.85□□□□□ -0.99
HSPG2-206ENST00000439717 BCAP31P51572 246 aa8.85□□□□□ -0.99
HSPG2-206ENST00000439717 PAFAH1B2P68402 229 aa8.85□□□□□ -0.99
HSPG2-206ENST00000439717 USF2Q15853 346 aaPredicted RBP8.85□□□□□ -0.99
HSPG2-206ENST00000439717 TCF24Q7RTU0 167 aa8.85□□□□□ -0.99
HSPG2-206ENST00000439717 RNF125Q96EQ8 232 aa8.85□□□□□ -0.99
HSPG2-206ENST00000439717 TUBA4BQ9H853 241 aa8.85□□□□□ -0.99
HSPG2-206ENST00000439717 NPVFQ9HCQ7 196 aa8.85□□□□□ -0.99
HSPG2-206ENST00000439717 LYRM2Q9NU23 88 aaPredicted RBP8.85□□□□□ -0.99
HSPG2-206ENST00000439717 MGAT4CQ9UBM8 478 aa8.85□□□□□ -0.99
HSPG2-206ENST00000439717 PFDN2Q9UHV9 154 aa8.85□□□□□ -0.99
HSPG2-206ENST00000439717 TRAV2A0A0B4J234 112 aa8.84□□□□□ -0.99
HSPG2-206ENST00000439717 SMCO3A2RU48 225 aa8.84□□□□□ -0.99
HSPG2-206ENST00000439717 OR11H12B2RN74 326 aa8.84□□□□□ -0.99
HSPG2-206ENST00000439717 CCNKO75909 580 aa8.84□□□□□ -0.99
HSPG2-206ENST00000439717 RLN2P04090 185 aa8.84□□□□□ -0.99
HSPG2-206ENST00000439717 P2RY1P47900 373 aa8.84□□□□□ -0.99
HSPG2-206ENST00000439717 EIF2B2P49770 351 aaKnown RBP8.84□□□□□ -0.99
HSPG2-206ENST00000439717 CAV2P51636 162 aa8.84□□□□□ -0.99
HSPG2-206ENST00000439717 CMC4P56277 68 aaPredicted RBP8.84□□□□□ -0.99
HSPG2-206ENST00000439717 H2BFSP57053 126 aa8.84□□□□□ -0.99
HSPG2-206ENST00000439717 RGS21Q2M5E4 152 aa8.84□□□□□ -0.99
HSPG2-206ENST00000439717 LILRB2Q8N423 598 aa8.84□□□□□ -0.99
HSPG2-206ENST00000439717 FAM110AQ9BQ89 295 aa8.84□□□□□ -0.99
HSPG2-206ENST00000439717 ALG5Q9Y673 324 aa8.84□□□□□ -0.99
HSPG2-206ENST00000439717 IGHV3-66A0A0C4DH42 116 aa8.83□□□□□ -1
HSPG2-206ENST00000439717 HELTA6NFD8 242 aa8.83□□□□□ -1
HSPG2-206ENST00000439717 FAM24AA6NFZ4 105 aa8.83□□□□□ -1
HSPG2-206ENST00000439717 DFFBO76075 338 aa8.83□□□□□ -1
HSPG2-206ENST00000439717 SULT1A1P50225 295 aa8.83□□□□□ -1
HSPG2-206ENST00000439717 AP2S1P53680 142 aaPredicted RBP8.83□□□□□ -1
HSPG2-206ENST00000439717 RRAS2P62070 204 aaPredicted RBP8.83□□□□□ -1
HSPG2-206ENST00000439717 SELENOTP62341 195 aa8.83□□□□□ -1
HSPG2-206ENST00000439717 ARL16Q0P5N6 197 aa8.83□□□□□ -1
HSPG2-206ENST00000439717 OR2F1Q13607 317 aa8.83□□□□□ -1
HSPG2-206ENST00000439717 TEPPQ6URK8 271 aa8.83□□□□□ -1
HSPG2-206ENST00000439717 C16orf54Q6UWD8 224 aa8.83□□□□□ -1
HSPG2-206ENST00000439717 STX12Q86Y82 276 aa8.83□□□□□ -1
HSPG2-206ENST00000439717 BPIFCQ8NFQ6 507 aa8.83□□□□□ -1
HSPG2-206ENST00000439717 PBDC1Q9BVG4 233 aa8.83□□□□□ -1
HSPG2-206ENST00000439717 SLC45A2Q9UMX9 530 aa8.83□□□□□ -1
HSPG2-206ENST00000439717 E5RGE8 158 aa8.82□□□□□ -1
HSPG2-206ENST00000439717 BUB3O43684 328 aa8.82□□□□□ -1
HSPG2-206ENST00000439717 PET100P0DJ07 73 aa8.82□□□□□ -1
HSPG2-206ENST00000439717 S100A7P31151 101 aa8.82□□□□□ -1
HSPG2-206ENST00000439717 S100A11P31949 105 aa8.82□□□□□ -1
HSPG2-206ENST00000439717 LYZP61626 148 aa8.82□□□□□ -1
HSPG2-206ENST00000439717 RPL11P62913 178 aaKnown RBP8.82□□□□□ -1
HSPG2-206ENST00000439717 SLC38A11Q08AI6 406 aa8.82□□□□□ -1
HSPG2-206ENST00000439717 CYP2G1PQ6ZSU1 146 aa8.82□□□□□ -1
HSPG2-206ENST00000439717 DEFB125Q8N687 156 aa8.82□□□□□ -1
HSPG2-206ENST00000439717 TMEM252Q8N6L7 170 aa8.82□□□□□ -1
HSPG2-206ENST00000439717 GLMPQ8WWB7 406 aa8.82□□□□□ -1
HSPG2-206ENST00000439717 MS4A6AQ9H2W1 248 aa8.82□□□□□ -1
HSPG2-206ENST00000439717 TGP01266 2768 aa8.82□□□□□ -1
HSPG2-206ENST00000439717 IGKV3-7A0A075B6H7 116 aa8.81□□□□□ -1
HSPG2-206ENST00000439717 DNASE2O00115 360 aaPredicted RBP8.81□□□□□ -1
HSPG2-206ENST00000439717 CST7O76096 145 aa8.81□□□□□ -1
HSPG2-206ENST00000439717 HBG1P69891 147 aa8.81□□□□□ -1
HSPG2-206ENST00000439717 HBG2P69892 147 aa8.81□□□□□ -1
HSPG2-206ENST00000439717 LRRC37A5PQ49AS3 106 aa8.81□□□□□ -1
HSPG2-206ENST00000439717 C1orf194Q5T5A4 169 aa8.81□□□□□ -1
HSPG2-206ENST00000439717 LINC00322Q6ZN03 302 aaPredicted RBP8.81□□□□□ -1
HSPG2-206ENST00000439717 SBSPONQ8IVN8 264 aa8.81□□□□□ -1
HSPG2-206ENST00000439717 GBGT1Q8N5D6 347 aa8.81□□□□□ -1
HSPG2-206ENST00000439717 PPP1R1CQ8WVI7 109 aa8.81□□□□□ -1
HSPG2-206ENST00000439717 ASCL2Q99929 193 aa8.81□□□□□ -1
HSPG2-206ENST00000439717 SLC25A31Q9H0C2 315 aa8.81□□□□□ -1
HSPG2-206ENST00000439717 WFDC10AQ9H1F0 79 aa8.81□□□□□ -1
HSPG2-206ENST00000439717 SRD5A3Q9H8P0 318 aa8.81□□□□□ -1
HSPG2-206ENST00000439717 FBXL17Q9UF56 701 aa8.81□□□□□ -1
HSPG2-206ENST00000439717 IGSF23A1L1A6 192 aa8.8□□□□□ -1
HSPG2-206ENST00000439717 H0YIZ8 118 aa8.8□□□□□ -1
HSPG2-206ENST00000439717 TFPI2P48307 235 aa8.8□□□□□ -1
HSPG2-206ENST00000439717 PLP1P60201 277 aa8.8□□□□□ -1
HSPG2-206ENST00000439717 RAB31Q13636 194 aa8.8□□□□□ -1
HSPG2-206ENST00000439717 OXA1LQ15070 435 aa8.8□□□□□ -1
HSPG2-206ENST00000439717 ATP6V1FQ16864 119 aa8.8□□□□□ -1
HSPG2-206ENST00000439717 VWC2Q2TAL6 325 aa8.8□□□□□ -1
HSPG2-206ENST00000439717 ODF3L2Q3SX64 289 aa8.8□□□□□ -1
HSPG2-206ENST00000439717 SIGLEC15Q6ZMC9 328 aa8.8□□□□□ -1
HSPG2-206ENST00000439717 TMEM182Q6ZP80 229 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms