RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 USF2Q15853 346 aaPredicted RBP13.76□□□□□ -0.21
CCDC78-204ENST00000439619 PSMG4Q5JS54 123 aa13.76□□□□□ -0.21
CCDC78-204ENST00000439619 ACTL10Q5JWF8 245 aa13.76□□□□□ -0.21
CCDC78-204ENST00000439619 SPANXN2Q5MJ10 180 aa13.76□□□□□ -0.21
CCDC78-204ENST00000439619 SIGLEC15Q6ZMC9 328 aa13.76□□□□□ -0.21
CCDC78-204ENST00000439619 TRPT1Q86TN4 253 aaKnown RBP13.76□□□□□ -0.21
CCDC78-204ENST00000439619 SEPSECSQ9HD40 501 aaKnown RBP13.76□□□□□ -0.21
CCDC78-204ENST00000439619 NRN1Q9NPD7 142 aa13.76□□□□□ -0.21
CCDC78-204ENST00000439619 TMED3Q9Y3Q3 217 aa13.76□□□□□ -0.21
CCDC78-204ENST00000439619 SACSQ9NZJ4 4579 aa13.75□□□□□ -0.21
CCDC78-204ENST00000439619 FAM90A26D6RGX4 464 aa13.75□□□□□ -0.21
CCDC78-204ENST00000439619 SLC25A6P12236 298 aa13.75□□□□□ -0.21
CCDC78-204ENST00000439619 OR8G2PQ6IF36 304 aa13.75□□□□□ -0.21
CCDC78-204ENST00000439619 RNF125Q96EQ8 232 aa13.75□□□□□ -0.21
CCDC78-204ENST00000439619 CIB3Q96Q77 187 aaPredicted RBP13.75□□□□□ -0.21
CCDC78-204ENST00000439619 PBDC1Q9BVG4 233 aa13.75□□□□□ -0.21
CCDC78-204ENST00000439619 FBXL17Q9UF56 701 aa13.75□□□□□ -0.21
CCDC78-204ENST00000439619 PAIP2BQ9ULR5 123 aaKnown RBP13.75□□□□□ -0.21
CCDC78-204ENST00000439619 V9GYH0 126 aa13.75□□□□□ -0.21
CCDC78-204ENST00000439619 KNCNA6PVL3 124 aa13.74□□□□□ -0.21
CCDC78-204ENST00000439619 BUB3O43684 328 aa13.74□□□□□ -0.21
CCDC78-204ENST00000439619 LRTM2Q8N967 370 aa13.74□□□□□ -0.21
CCDC78-204ENST00000439619 C1QTNF4Q9BXJ3 329 aa13.74□□□□□ -0.21
CCDC78-204ENST00000439619 LYSTQ99698 3801 aa13.73□□□□□ -0.21
CCDC78-204ENST00000439619 SNRPGP15A8MWD9 76 aa13.73□□□□□ -0.21
CCDC78-204ENST00000439619 MIFP14174 115 aa13.73□□□□□ -0.21
CCDC78-204ENST00000439619 NANOS2P60321 138 aaKnown RBP13.73□□□□□ -0.21
CCDC78-204ENST00000439619 GAMTQ14353 236 aa13.73□□□□□ -0.21
CCDC78-204ENST00000439619 RAB40CQ96S21 281 aa13.73□□□□□ -0.21
CCDC78-204ENST00000439619 ZNF79Q15937 498 aa13.72□□□□□ -0.21
CCDC78-204ENST00000439619 PPP1R14BQ96C90 147 aa13.72□□□□□ -0.21
CCDC78-204ENST00000439619 ZNF701M0R085 212 aaPredicted RBP13.71□□□□□ -0.21
CCDC78-204ENST00000439619 DEFB4AO15263 64 aa13.71□□□□□ -0.21
CCDC78-204ENST00000439619 PITX3O75364 302 aa13.71□□□□□ -0.21
CCDC78-204ENST00000439619 SFT2D2O95562 160 aa13.71□□□□□ -0.21
CCDC78-204ENST00000439619 CFDP00746 253 aaPredicted RBP13.71□□□□□ -0.21
CCDC78-204ENST00000439619 IAPPP10997 89 aa13.71□□□□□ -0.21
CCDC78-204ENST00000439619 S100A7P31151 101 aa13.71□□□□□ -0.21
CCDC78-204ENST00000439619 ID1P41134 155 aa13.71□□□□□ -0.21
CCDC78-204ENST00000439619 UBE2MP61081 183 aaKnown RBP13.71□□□□□ -0.21
CCDC78-204ENST00000439619 TRIQKQ629K1 86 aa13.71□□□□□ -0.21
CCDC78-204ENST00000439619 CCDC190Q86UF4 302 aa13.71□□□□□ -0.21
CCDC78-204ENST00000439619 DNAH1Q9P2D7 4330 aa13.7□□□□□ -0.22
CCDC78-204ENST00000439619 NAP1L6A6NFF2 107 aa13.7□□□□□ -0.22
CCDC78-204ENST00000439619 C11orf94C9JXX5 98 aa13.7□□□□□ -0.22
CCDC78-204ENST00000439619 SYNGR2O43760 224 aa13.7□□□□□ -0.22
CCDC78-204ENST00000439619 TCTAP57738 103 aa13.7□□□□□ -0.22
CCDC78-204ENST00000439619 LYZP61626 148 aa13.7□□□□□ -0.22
CCDC78-204ENST00000439619 PPP1R1AQ13522 171 aa13.7□□□□□ -0.22
CCDC78-204ENST00000439619 C1orf194Q5T5A4 169 aa13.7□□□□□ -0.22
CCDC78-204ENST00000439619 C2CD4CQ8TF44 421 aa13.7□□□□□ -0.22
CCDC78-204ENST00000439619 HRH4Q9H3N8 390 aa13.7□□□□□ -0.22
CCDC78-204ENST00000439619 TBC1D24Q9ULP9 559 aa13.7□□□□□ -0.22
CCDC78-204ENST00000439619 HOXB5P09067 269 aa13.69□□□□□ -0.22
CCDC78-204ENST00000439619 ZNF90Q03938 601 aa13.69□□□□□ -0.22
CCDC78-204ENST00000439619 SAMD13Q5VXD3 122 aa13.69□□□□□ -0.22
CCDC78-204ENST00000439619 GGNBP1Q5YKI7 109 aa13.69□□□□□ -0.22
CCDC78-204ENST00000439619 TRGV9Q99603 122 aa13.69□□□□□ -0.22
CCDC78-204ENST00000439619 IGHV4-28A0A0C4DH34 117 aa13.68□□□□□ -0.22
CCDC78-204ENST00000439619 CENPXA8MT69 81 aa13.68□□□□□ -0.22
CCDC78-204ENST00000439619 ZNF705EA8MWA4 302 aaPredicted RBP13.68□□□□□ -0.22
CCDC78-204ENST00000439619 WRBO00258 174 aa13.68□□□□□ -0.22
CCDC78-204ENST00000439619 GIG44P09565 113 aaPredicted RBP13.68□□□□□ -0.22
CCDC78-204ENST00000439619 C4BPBP20851 252 aa13.68□□□□□ -0.22
CCDC78-204ENST00000439619 NKX2-1P43699 371 aaPredicted RBP13.68□□□□□ -0.22
CCDC78-204ENST00000439619 LGALS9CQ6DKI2 356 aa13.68□□□□□ -0.22
CCDC78-204ENST00000439619 Q8NAQ8 132 aa13.68□□□□□ -0.22
CCDC78-204ENST00000439619 COQ8AQ8NI60 647 aa13.68□□□□□ -0.22
CCDC78-204ENST00000439619 IFNA21P01568 189 aa13.67□□□□□ -0.22
CCDC78-204ENST00000439619 OR2F1Q13607 317 aa13.67□□□□□ -0.22
CCDC78-204ENST00000439619 OR8I2Q8N0Y5 310 aa13.67□□□□□ -0.22
CCDC78-204ENST00000439619 MAGT1Q9H0U3 335 aa13.67□□□□□ -0.22
CCDC78-204ENST00000439619 CLEC5AQ9NY25 188 aa13.67□□□□□ -0.22
CCDC78-204ENST00000439619 STRAPQ9Y3F4 350 aaKnown RBP13.67□□□□□ -0.22
CCDC78-204ENST00000439619 IGKV1D-37A0A075B6S9 117 aa13.66□□□□□ -0.22
CCDC78-204ENST00000439619 H3BMM0 161 aa13.66□□□□□ -0.22
CCDC78-204ENST00000439619 PSMB3P49720 205 aa13.66□□□□□ -0.22
CCDC78-204ENST00000439619 SPANXN5Q5MJ07 72 aa13.66□□□□□ -0.22
CCDC78-204ENST00000439619 LINC00052Q96N35 136 aa13.66□□□□□ -0.22
CCDC78-204ENST00000439619 SRRQ9GZT4 340 aa13.66□□□□□ -0.22
CCDC78-204ENST00000439619 RBM38Q9H0Z9 239 aaKnown RBP13.66□□□□□ -0.22
CCDC78-204ENST00000439619 HLA-DRB4P13762 266 aa13.65□□□□□ -0.22
CCDC78-204ENST00000439619 MEOX2P50222 304 aa13.65□□□□□ -0.22
CCDC78-204ENST00000439619 AKR1C1Q04828 323 aa13.65□□□□□ -0.22
CCDC78-204ENST00000439619 SPATA31B1PQ5VZV4 182 aa13.65□□□□□ -0.22
CCDC78-204ENST00000439619 THAP8Q8NA92 274 aa13.65□□□□□ -0.22
CCDC78-204ENST00000439619 BPIFCQ8NFQ6 507 aa13.65□□□□□ -0.22
CCDC78-204ENST00000439619 XCL2Q9UBD3 114 aa13.65□□□□□ -0.22
CCDC78-204ENST00000439619 SLC45A2Q9UMX9 530 aa13.65□□□□□ -0.22
CCDC78-204ENST00000439619 HLA-DRB4X5D2U9 266 aa13.65□□□□□ -0.22
CCDC78-204ENST00000439619 C9orf170A2RU37 121 aa13.64□□□□□ -0.23
CCDC78-204ENST00000439619 NDUFB6O95139 128 aa13.64□□□□□ -0.23
CCDC78-204ENST00000439619 RBMY1A1P0DJD3 496 aaKnown RBP13.64□□□□□ -0.23
CCDC78-204ENST00000439619 RBMY1CP0DJD4 496 aa13.64□□□□□ -0.23
CCDC78-204ENST00000439619 GALR1P47211 349 aa13.64□□□□□ -0.23
CCDC78-204ENST00000439619 RBMY1FQ15415 496 aaKnown RBP13.64□□□□□ -0.23
CCDC78-204ENST00000439619 FOXI2Q6ZQN5 318 aa13.64□□□□□ -0.23
CCDC78-204ENST00000439619 CSNK1G2-AS1Q8NCQ2 148 aa13.64□□□□□ -0.23
CCDC78-204ENST00000439619 X6R8D5 127 aa13.64□□□□□ -0.23
CCDC78-204ENST00000439619 TRAV10A0A0B4J240 114 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms