RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 CAV2P51636 162 aa14.61□□□□□ -0.07
SEMA3B-206ENST00000439487 CD81P60033 236 aa14.61□□□□□ -0.07
SEMA3B-206ENST00000439487 DLK1P80370 383 aa14.61□□□□□ -0.07
SEMA3B-206ENST00000439487 OR2F1Q13607 317 aa14.61□□□□□ -0.07
SEMA3B-206ENST00000439487 USF2Q15853 346 aaPredicted RBP14.61□□□□□ -0.07
SEMA3B-206ENST00000439487 OR51G1Q8NGK1 321 aa14.61□□□□□ -0.07
SEMA3B-206ENST00000439487 NEURL2Q9BR09 285 aa14.61□□□□□ -0.07
SEMA3B-206ENST00000439487 VSIRQ9H7M9 311 aa14.61□□□□□ -0.07
SEMA3B-206ENST00000439487 TSPAN4O14817 238 aa14.6□□□□□ -0.07
SEMA3B-206ENST00000439487 CRYBB3P26998 211 aa14.6□□□□□ -0.07
SEMA3B-206ENST00000439487 CYCSP99999 105 aaKnown RBP14.6□□□□□ -0.07
SEMA3B-206ENST00000439487 LRRC37A5PQ49AS3 106 aa14.6□□□□□ -0.07
SEMA3B-206ENST00000439487 TMEM144Q7Z5S9 345 aa14.6□□□□□ -0.07
SEMA3B-206ENST00000439487 IGKV3-7A0A075B6H7 116 aa14.59□□□□□ -0.07
SEMA3B-206ENST00000439487 DEDDO75618 318 aa14.59□□□□□ -0.07
SEMA3B-206ENST00000439487 CST7O76096 145 aa14.59□□□□□ -0.07
SEMA3B-206ENST00000439487 FABP1P07148 127 aa14.59□□□□□ -0.07
SEMA3B-206ENST00000439487 HNRNPCP07910 306 aaKnown RBP eCLIP14.59□□□□□ -0.07
SEMA3B-206ENST00000439487 BMI1P35226 326 aa14.59□□□□□ -0.07
SEMA3B-206ENST00000439487 FAM90A2PQ658T7 463 aa14.59□□□□□ -0.07
SEMA3B-206ENST00000439487 TCF24Q7RTU0 167 aa14.59□□□□□ -0.07
SEMA3B-206ENST00000439487 RNF125Q96EQ8 232 aa14.59□□□□□ -0.07
SEMA3B-206ENST00000439487 PBDC1Q9BVG4 233 aa14.59□□□□□ -0.07
SEMA3B-206ENST00000439487 LYRM2Q9NU23 88 aaPredicted RBP14.59□□□□□ -0.07
SEMA3B-206ENST00000439487 A0A1W2PS18 150 aa14.58□□□□□ -0.08
SEMA3B-206ENST00000439487 IGSF23A1L1A6 192 aa14.58□□□□□ -0.08
SEMA3B-206ENST00000439487 DFFBO76075 338 aa14.58□□□□□ -0.08
SEMA3B-206ENST00000439487 RLN2P04090 185 aa14.58□□□□□ -0.08
SEMA3B-206ENST00000439487 IGHV4-30-4P0DP06 118 aa14.58□□□□□ -0.08
SEMA3B-206ENST00000439487 TMEM182Q6ZP80 229 aaPredicted RBP14.58□□□□□ -0.08
SEMA3B-206ENST00000439487 NARS2Q96I59 477 aaKnown RBP14.58□□□□□ -0.08
SEMA3B-206ENST00000439487 SPAG8Q99932 426 aaPredicted RBP14.58□□□□□ -0.08
SEMA3B-206ENST00000439487 B9D2Q9BPU9 175 aa14.58□□□□□ -0.08
SEMA3B-206ENST00000439487 WFDC10AQ9H1F0 79 aa14.58□□□□□ -0.08
SEMA3B-206ENST00000439487 TMEM231Q9H6L2 316 aa14.58□□□□□ -0.08
SEMA3B-206ENST00000439487 OR5AC2Q9NZP5 309 aa14.58□□□□□ -0.08
SEMA3B-206ENST00000439487 RABAC1Q9UI14 185 aa14.58□□□□□ -0.08
SEMA3B-206ENST00000439487 U3KQE9 123 aa14.58□□□□□ -0.08
SEMA3B-206ENST00000439487 COL7A1Q02388 2944 aa14.58□□□□□ -0.08
SEMA3B-206ENST00000439487 FNDC10F2Z333 226 aa14.57□□□□□ -0.08
SEMA3B-206ENST00000439487 H0YIZ8 118 aa14.57□□□□□ -0.08
SEMA3B-206ENST00000439487 GATA2P23769 480 aaPredicted RBP14.57□□□□□ -0.08
SEMA3B-206ENST00000439487 P2RY1P47900 373 aa14.57□□□□□ -0.08
SEMA3B-206ENST00000439487 LYZP61626 148 aa14.57□□□□□ -0.08
SEMA3B-206ENST00000439487 SLC38A11Q08AI6 406 aa14.57□□□□□ -0.08
SEMA3B-206ENST00000439487 GBGT1Q8N5D6 347 aa14.57□□□□□ -0.08
SEMA3B-206ENST00000439487 TMEM252Q8N6L7 170 aa14.57□□□□□ -0.08
SEMA3B-206ENST00000439487 TMEM217Q8N7C4 229 aa14.57□□□□□ -0.08
SEMA3B-206ENST00000439487 PPP1R1CQ8WVI7 109 aa14.57□□□□□ -0.08
SEMA3B-206ENST00000439487 NPVFQ9HCQ7 196 aa14.57□□□□□ -0.08
SEMA3B-206ENST00000439487 FRMD6-AS1P0C7T7 363 aa14.56□□□□□ -0.08
SEMA3B-206ENST00000439487 CXCL3P19876 107 aa14.56□□□□□ -0.08
SEMA3B-206ENST00000439487 TFPI2P48307 235 aa14.56□□□□□ -0.08
SEMA3B-206ENST00000439487 OXA1LQ15070 435 aa14.56□□□□□ -0.08
SEMA3B-206ENST00000439487 FCN2Q15485 313 aa14.56□□□□□ -0.08
SEMA3B-206ENST00000439487 DEFB125Q8N687 156 aa14.56□□□□□ -0.08
SEMA3B-206ENST00000439487 ASCL2Q99929 193 aa14.56□□□□□ -0.08
SEMA3B-206ENST00000439487 GGACTQ9BVM4 153 aa14.56□□□□□ -0.08
SEMA3B-206ENST00000439487 MED28Q9H204 178 aa14.56□□□□□ -0.08
SEMA3B-206ENST00000439487 OR11H12B2RN74 326 aa14.55□□□□□ -0.08
SEMA3B-206ENST00000439487 E5RGE8 158 aa14.55□□□□□ -0.08
SEMA3B-206ENST00000439487 SULT1A1P50225 295 aa14.55□□□□□ -0.08
SEMA3B-206ENST00000439487 RPL11P62913 178 aaKnown RBP14.55□□□□□ -0.08
SEMA3B-206ENST00000439487 CYP2G1PQ6ZSU1 146 aa14.55□□□□□ -0.08
SEMA3B-206ENST00000439487 GRAMD2BQ96HH9 432 aa14.55□□□□□ -0.08
SEMA3B-206ENST00000439487 C19orf73Q9NVV2 129 aa14.55□□□□□ -0.08
SEMA3B-206ENST00000439487 UBQLN2Q9UHD9 624 aa14.55□□□□□ -0.08
SEMA3B-206ENST00000439487 OR4C46A6NHA9 309 aa14.54□□□□□ -0.08
SEMA3B-206ENST00000439487 CD5P06127 495 aa14.54□□□□□ -0.08
SEMA3B-206ENST00000439487 EIF2B2P49770 351 aaKnown RBP14.54□□□□□ -0.08
SEMA3B-206ENST00000439487 TEPPQ6URK8 271 aa14.54□□□□□ -0.08
SEMA3B-206ENST00000439487 C16orf54Q6UWD8 224 aa14.54□□□□□ -0.08
SEMA3B-206ENST00000439487 STX12Q86Y82 276 aa14.54□□□□□ -0.08
SEMA3B-206ENST00000439487 WFDC3Q8IUB2 231 aa14.54□□□□□ -0.08
SEMA3B-206ENST00000439487 BPIFCQ8NFQ6 507 aa14.54□□□□□ -0.08
SEMA3B-206ENST00000439487 RNF126Q9BV68 326 aa14.54□□□□□ -0.08
SEMA3B-206ENST00000439487 TUBA4BQ9H853 241 aa14.54□□□□□ -0.08
SEMA3B-206ENST00000439487 A8MZ25 164 aa14.53□□□□□ -0.08
SEMA3B-206ENST00000439487 MPC2O95563 127 aa14.53□□□□□ -0.08
SEMA3B-206ENST00000439487 CFDP00746 253 aaPredicted RBP14.53□□□□□ -0.08
SEMA3B-206ENST00000439487 STPG3Q8N7X2 389 aa14.53□□□□□ -0.08
SEMA3B-206ENST00000439487 OR11H7Q8NGC8 314 aa14.53□□□□□ -0.08
SEMA3B-206ENST00000439487 GLMPQ8WWB7 406 aa14.53□□□□□ -0.08
SEMA3B-206ENST00000439487 MS4A6AQ9H2W1 248 aa14.53□□□□□ -0.08
SEMA3B-206ENST00000439487 AGRNO00468 2067 aa14.53□□□□□ -0.08
SEMA3B-206ENST00000439487 HUWE1Q7Z6Z7 4374 aaKnown RBP14.52□□□□□ -0.08
SEMA3B-206ENST00000439487 DNASE2O00115 360 aaPredicted RBP14.52□□□□□ -0.09
SEMA3B-206ENST00000439487 BUB3O43684 328 aa14.52□□□□□ -0.09
SEMA3B-206ENST00000439487 S100A11P31949 105 aa14.52□□□□□ -0.09
SEMA3B-206ENST00000439487 PAFAH1B2P68402 229 aa14.52□□□□□ -0.09
SEMA3B-206ENST00000439487 NHLH2Q02577 135 aa14.52□□□□□ -0.09
SEMA3B-206ENST00000439487 SLC25A31Q9H0C2 315 aa14.52□□□□□ -0.09
SEMA3B-206ENST00000439487 SRD5A3Q9H8P0 318 aa14.52□□□□□ -0.09
SEMA3B-206ENST00000439487 ORM2P19652 201 aa14.51□□□□□ -0.09
SEMA3B-206ENST00000439487 HBG1P69891 147 aa14.51□□□□□ -0.09
SEMA3B-206ENST00000439487 HBG2P69892 147 aa14.51□□□□□ -0.09
SEMA3B-206ENST00000439487 EWSR1Q01844 656 aaKnown RBP eCLIP14.51□□□□□ -0.09
SEMA3B-206ENST00000439487 ODF3L2Q3SX64 289 aa14.51□□□□□ -0.09
SEMA3B-206ENST00000439487 SBSPONQ8IVN8 264 aa14.51□□□□□ -0.09
SEMA3B-206ENST00000439487 STXBP6Q8NFX7 210 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms