RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 RTL8AQ9BWD3 113 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 KRTAP4-4Q9BYR3 166 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 WDR61Q9GZS3 305 aaKnown RBP2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 TMEM191AQ9H0A3 160 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 RERGLQ9H628 205 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 CXorf21Q9HAI6 301 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 RPRMQ9NS64 109 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 PCTPQ9UKL6 214 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 ZNF835Q9Y2P0 537 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 IER3IP1Q9Y5U9 82 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 SCN10AQ9Y5Y9 1956 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 DOCK5Q9H7D0 1870 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 LOXHD1Q8IVV2 1947 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 KDM5CP41229 1560 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 PRXQ9BXM0 1461 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 KIF26AQ9ULI4 1882 aaPredicted RBP2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 ARHGAP5Q13017 1502 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 IGHV3-49A0A0A0MS15 119 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 FAM236AA0A1B0GUQ0 79 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 FAM236BA0A1B0GV22 79 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 SOCS1O15524 211 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 DEDDO75618 318 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 IGLV2-8P01709 118 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 LINC00869P0C866 280 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 IGLC1P0CG04 106 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 GZMBP10144 247 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 RPS11P62280 158 aaKnown RBP eCLIP2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 FKBP1AP62942 108 aaKnown RBP2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 PLGLB1Q02325 96 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 HES1Q14469 280 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 SP6Q3SY56 376 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 MORN3Q6PF18 240 aaPredicted RBP2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 Q6Q795 121 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 UNQ9165/PRO28630Q6UXU0 137 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 HMGN2P46Q86SG4 172 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 PRNTQ86SH4 94 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 SLC22A24Q8N4F4 322 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 TEX29Q8N6K0 151 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 ZNF645Q8N7E2 425 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 ZNF709Q8N972 641 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 ZNF555Q8NEP9 628 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 RMI2Q96E14 147 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 ZC2HC1AQ96GY0 325 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 ABHD14BQ96IU4 210 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 ERMAPQ96PL5 475 aaPredicted RBP2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 GPX7Q96SL4 187 aaPredicted RBP2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 NMNAT3Q96T66 252 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 S100A13Q99584 98 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 MRPL32Q9BYC8 188 aaKnown RBP2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 COMMD5Q9GZQ3 224 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 TCEAL2Q9H3H9 227 aaPredicted RBP2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 PLEKHF2Q9H8W4 249 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 SMCO4Q9NRQ5 59 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 ASF1BQ9NVP2 202 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 COQ4Q9Y3A0 265 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 ZNF706Q9Y5V0 76 aaPredicted RBP2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 THSD7AQ9UPZ6 1657 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 MYH9P35579 1960 aaKnown RBP2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 TRIP11Q15643 1979 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 NLRC5Q86WI3 1866 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 GOLGA3Q08378 1498 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 NRXN1Q9ULB1 1477 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 SHANK2Q9UPX8 1470 aa2.14□□□□□ -2.07
LSM1P1-201ENST00000438629 TRPM1Q7Z4N2 1603 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 CROCC2H7BZ55 1655 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 KIF1AQ12756 1690 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 MAP2P11137 1827 aaKnown RBP2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 IGHV3-72A0A0B4J1Y9 119 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 IGHV1-69-2A0A0G2JMI3 117 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 G3V3Q6 166 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 ISLRO14498 428 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 GSTZ1O43708 216 aaPredicted RBP2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 TNFP01375 233 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 IL4P05112 153 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 ZNF93P35789 620 aaPredicted RBP2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 OPRK1P41145 380 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 TMBIM6P55061 237 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 TMEM258P61165 79 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 KLRD1Q13241 179 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 LY6EQ16553 131 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 LINC00303Q3SY05 128 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 SLC25A34Q6PIV7 304 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 ALKAL2Q6UX46 152 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 Q6ZS49 121 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 SSX8Q7RTT4 187 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 FAM19A3Q7Z5A8 133 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 KTN1-AS1Q86SY8 53 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 TMEM75Q8N9X5 138 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 LINC00301Q8NCQ3 95 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 C2orf15Q8WU43 125 aaKnown RBP2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 SLC25A46Q96AG3 418 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 C18orf15Q96N68 181 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 CIB3Q96Q77 187 aaPredicted RBP2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 SNRNP25Q9BV90 132 aaKnown RBP2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 TSSK6Q9BXA6 273 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 DPY30Q9C005 99 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 ATG5Q9H1Y0 275 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 C11orf68Q9H3H3 251 aaKnown RBP2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 BANF2Q9H503 90 aa2.13□□□□□ -2.07
LSM1P1-201ENST00000438629 TUBA4BQ9H853 241 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms