RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 LRRC20Q8TCA0 184 aa17.77■□□□□ 0.44
CPSF4-204ENST00000436336 Q8WTZ3 238 aa17.77■□□□□ 0.44
CPSF4-204ENST00000436336 WFDC12Q8WWY7 111 aa17.77■□□□□ 0.44
CPSF4-204ENST00000436336 PEF1Q9UBV8 284 aaKnown RBP17.77■□□□□ 0.44
CPSF4-204ENST00000436336 NIPBLQ6KC79 2804 aaeCLIP17.77■□□□□ 0.43
CPSF4-204ENST00000436336 PPP5D1E7EU14 171 aa17.76■□□□□ 0.43
CPSF4-204ENST00000436336 ZNF600Q6ZNG1 722 aa17.76■□□□□ 0.43
CPSF4-204ENST00000436336 RPRMQ9NS64 109 aa17.76■□□□□ 0.43
CPSF4-204ENST00000436336 ANKRD34BA5PLL1 514 aa17.75■□□□□ 0.43
CPSF4-204ENST00000436336 TRBV12-3P01733 135 aa17.75■□□□□ 0.43
CPSF4-204ENST00000436336 RAB2AP61019 212 aa17.75■□□□□ 0.43
CPSF4-204ENST00000436336 RELQ04864 619 aaPredicted RBP17.75■□□□□ 0.43
CPSF4-204ENST00000436336 PXDC1Q5TGL8 231 aa17.75■□□□□ 0.43
CPSF4-204ENST00000436336 DPPA3Q6W0C5 159 aa17.75■□□□□ 0.43
CPSF4-204ENST00000436336 OR5B12Q96R08 314 aa17.75■□□□□ 0.43
CPSF4-204ENST00000436336 PLP1P60201 277 aa17.75■□□□□ 0.43
CPSF4-204ENST00000436336 FOXL1Q12952 345 aa17.75■□□□□ 0.43
CPSF4-204ENST00000436336 OR10G4Q8NGN3 311 aa17.75■□□□□ 0.43
CPSF4-204ENST00000436336 OR10G9Q8NGN4 311 aa17.75■□□□□ 0.43
CPSF4-204ENST00000436336 OR10G7Q8NGN6 311 aa17.75■□□□□ 0.43
CPSF4-204ENST00000436336 OR2C1O95371 312 aa17.74■□□□□ 0.43
CPSF4-204ENST00000436336 CD28P10747 220 aa17.74■□□□□ 0.43
CPSF4-204ENST00000436336 GCSAMLQ5JQS6 135 aa17.74■□□□□ 0.43
CPSF4-204ENST00000436336 OR1L4Q8NGR5 311 aa17.74■□□□□ 0.43
CPSF4-204ENST00000436336 C19orf24Q9BVV8 132 aa17.74■□□□□ 0.43
CPSF4-204ENST00000436336 KHDC1LQ5JSQ8 128 aa17.73■□□□□ 0.43
CPSF4-204ENST00000436336 ZNF414Q96IQ9 312 aa17.73■□□□□ 0.43
CPSF4-204ENST00000436336 PFDN5Q99471 154 aa17.73■□□□□ 0.43
CPSF4-204ENST00000436336 PUS1Q9Y606 427 aaKnown RBP eCLIP17.73■□□□□ 0.43
CPSF4-204ENST00000436336 WI2-2373I1.2A0A1W2PRP0 233 aa17.72■□□□□ 0.43
CPSF4-204ENST00000436336 ZNF705EA8MWA4 302 aaPredicted RBP17.72■□□□□ 0.43
CPSF4-204ENST00000436336 I3L521 148 aa17.72■□□□□ 0.43
CPSF4-204ENST00000436336 BMPR1BO00238 502 aa17.72■□□□□ 0.43
CPSF4-204ENST00000436336 GGCTO75223 188 aaKnown RBP17.72■□□□□ 0.43
CPSF4-204ENST00000436336 IL4P05112 153 aa17.72■□□□□ 0.43
CPSF4-204ENST00000436336 RPP25LQ8N5L8 163 aaKnown RBP17.72■□□□□ 0.43
CPSF4-204ENST00000436336 FAM213BQ8TBF2 198 aa17.72■□□□□ 0.43
CPSF4-204ENST00000436336 GATAD1Q8WUU5 269 aa17.72■□□□□ 0.43
CPSF4-204ENST00000436336 C4orf3Q8WVX3 66 aa17.72■□□□□ 0.43
CPSF4-204ENST00000436336 RNF125Q96EQ8 232 aa17.72■□□□□ 0.43
CPSF4-204ENST00000436336 SAT2Q96F10 170 aaPredicted RBP17.72■□□□□ 0.43
CPSF4-204ENST00000436336 ELOA3CA0A087WX78 387 aaPredicted RBP17.72■□□□□ 0.43
CPSF4-204ENST00000436336 ORM2P19652 201 aa17.72■□□□□ 0.43
CPSF4-204ENST00000436336 FHITP49789 147 aa17.72■□□□□ 0.43
CPSF4-204ENST00000436336 RAB14P61106 215 aa17.72■□□□□ 0.43
CPSF4-204ENST00000436336 LYZP61626 148 aa17.72■□□□□ 0.43
CPSF4-204ENST00000436336 OR1B1Q8NGR6 318 aa17.72■□□□□ 0.43
CPSF4-204ENST00000436336 TMEM37Q8WXS4 190 aa17.72■□□□□ 0.43
CPSF4-204ENST00000436336 DNAJC4Q9NNZ3 241 aa17.72■□□□□ 0.43
CPSF4-204ENST00000436336 DOK5Q9P104 306 aa17.72■□□□□ 0.43
CPSF4-204ENST00000436336 COX7A2P2O60397 106 aa17.71■□□□□ 0.43
CPSF4-204ENST00000436336 FAM122CQ6P4D5 195 aa17.71■□□□□ 0.43
CPSF4-204ENST00000436336 C11orf44Q8N8P7 122 aa17.71■□□□□ 0.43
CPSF4-204ENST00000436336 ACTR3CQ9C0K3 210 aaPredicted RBP17.71■□□□□ 0.43
CPSF4-204ENST00000436336 TSSC4Q9Y5U2 329 aaPredicted RBP17.71■□□□□ 0.43
CPSF4-204ENST00000436336 IGHV3-35A0A0C4DH35 117 aa17.7■□□□□ 0.42
CPSF4-204ENST00000436336 HYPMO75409 117 aa17.7■□□□□ 0.42
CPSF4-204ENST00000436336 BLOC1S1P78537 153 aa17.7■□□□□ 0.42
CPSF4-204ENST00000436336 C10orf113Q5VZT2 155 aa17.7■□□□□ 0.42
CPSF4-204ENST00000436336 TOMM20LQ6UXN7 152 aa17.7■□□□□ 0.42
CPSF4-204ENST00000436336 PATE2Q6UY27 113 aa17.7■□□□□ 0.42
CPSF4-204ENST00000436336 RNF2Q99496 336 aa17.7■□□□□ 0.42
CPSF4-204ENST00000436336 CITED2Q99967 270 aaPredicted RBP17.7■□□□□ 0.42
CPSF4-204ENST00000436336 PBDC1Q9BVG4 233 aa17.7■□□□□ 0.42
CPSF4-204ENST00000436336 A0A1W2PPV4 95 aa17.69■□□□□ 0.42
CPSF4-204ENST00000436336 SEC14L6B5MCN3 397 aa17.69■□□□□ 0.42
CPSF4-204ENST00000436336 NDUFA4O00483 81 aa17.69■□□□□ 0.42
CPSF4-204ENST00000436336 HSPB1P04792 205 aaKnown RBP17.69■□□□□ 0.42
CPSF4-204ENST00000436336 NMBP08949 121 aa17.69■□□□□ 0.42
CPSF4-204ENST00000436336 OR5G3P0C626 314 aa17.69■□□□□ 0.42
CPSF4-204ENST00000436336 CDC34P49427 236 aaPredicted RBP17.69■□□□□ 0.42
CPSF4-204ENST00000436336 RHOBP62745 196 aa17.69■□□□□ 0.42
CPSF4-204ENST00000436336 C18orf65Q6ZTR6 163 aa17.69■□□□□ 0.42
CPSF4-204ENST00000436336 KLHL30-AS1Q8NEE0 82 aa17.69■□□□□ 0.42
CPSF4-204ENST00000436336 RCC1LQ96I51 464 aaKnown RBP17.69■□□□□ 0.42
CPSF4-204ENST00000436336 ZFAND3Q9H8U3 227 aa17.69■□□□□ 0.42
CPSF4-204ENST00000436336 CLLU1Q5K131 121 aa17.69■□□□□ 0.42
CPSF4-204ENST00000436336 FAM78BQ5VT40 261 aa17.69■□□□□ 0.42
CPSF4-204ENST00000436336 PRIMA1Q86XR5 153 aa17.69■□□□□ 0.42
CPSF4-204ENST00000436336 PCNPQ8WW12 178 aaKnown RBP17.69■□□□□ 0.42
CPSF4-204ENST00000436336 MRPL27Q9P0M9 148 aaKnown RBP17.69■□□□□ 0.42
CPSF4-204ENST00000436336 JMJD1CQ15652 2540 aa17.68■□□□□ 0.42
CPSF4-204ENST00000436336 CTXND1A0A1B0GTU2 59 aa17.68■□□□□ 0.42
CPSF4-204ENST00000436336 USF2Q15853 346 aaPredicted RBP17.68■□□□□ 0.42
CPSF4-204ENST00000436336 ZNF726P1Q15940 193 aa17.68■□□□□ 0.42
CPSF4-204ENST00000436336 MRPL32Q9BYC8 188 aaKnown RBP17.68■□□□□ 0.42
CPSF4-204ENST00000436336 SLC25A22Q9H936 323 aa17.68■□□□□ 0.42
CPSF4-204ENST00000436336 SEPSECSQ9HD40 501 aaKnown RBP17.68■□□□□ 0.42
CPSF4-204ENST00000436336 HIGD1AQ9Y241 93 aa17.68■□□□□ 0.42
CPSF4-204ENST00000436336 IGHV4OR15-8A0A075B7B6 117 aa17.67■□□□□ 0.42
CPSF4-204ENST00000436336 A0A087WW49 117 aa17.67■□□□□ 0.42
CPSF4-204ENST00000436336 NUDT19A8MXV4 375 aa17.67■□□□□ 0.42
CPSF4-204ENST00000436336 FUT9Q9Y231 359 aa17.67■□□□□ 0.42
CPSF4-204ENST00000436336 H2AFB1P0C5Y9 115 aa17.67■□□□□ 0.42
CPSF4-204ENST00000436336 RPEL1Q2QD12 228 aa17.67■□□□□ 0.42
CPSF4-204ENST00000436336 SSX7Q7RTT5 188 aa17.67■□□□□ 0.42
CPSF4-204ENST00000436336 LINC00305Q7Z4B0 112 aa17.67■□□□□ 0.42
CPSF4-204ENST00000436336 GPHB5Q86YW7 130 aa17.67■□□□□ 0.42
CPSF4-204ENST00000436336 RAB24Q969Q5 203 aa17.67■□□□□ 0.42
CPSF4-204ENST00000436336 KRTAP10-3P60369 221 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms