RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 ZNF688P0C7X2 276 aa13.47□□□□□ -0.25
HMGN1-207ENST00000436324 EIF2B2P49770 351 aaKnown RBP13.47□□□□□ -0.25
HMGN1-207ENST00000436324 ZNF90Q03938 601 aa13.47□□□□□ -0.25
HMGN1-207ENST00000436324 DHRS2Q13268 280 aa13.47□□□□□ -0.25
HMGN1-207ENST00000436324 C4orf46Q504U0 113 aa13.47□□□□□ -0.25
HMGN1-207ENST00000436324 LYG2Q86SG7 212 aa13.47□□□□□ -0.25
HMGN1-207ENST00000436324 COQ8AQ8NI60 647 aa13.47□□□□□ -0.25
HMGN1-207ENST00000436324 GLMPQ8WWB7 406 aa13.47□□□□□ -0.25
HMGN1-207ENST00000436324 CIB3Q96Q77 187 aaPredicted RBP13.47□□□□□ -0.25
HMGN1-207ENST00000436324 C7orf50Q9BRJ6 194 aaKnown RBP13.47□□□□□ -0.25
HMGN1-207ENST00000436324 IGKV1D-37A0A075B6S9 117 aa13.46□□□□□ -0.25
HMGN1-207ENST00000436324 HELTA6NFD8 242 aa13.46□□□□□ -0.25
HMGN1-207ENST00000436324 RPP30P78346 268 aaKnown RBP13.46□□□□□ -0.25
HMGN1-207ENST00000436324 OR2F1Q13607 317 aa13.46□□□□□ -0.25
HMGN1-207ENST00000436324 SPANXN5Q5MJ07 72 aa13.46□□□□□ -0.25
HMGN1-207ENST00000436324 RNF125Q96EQ8 232 aa13.46□□□□□ -0.25
HMGN1-207ENST00000436324 KNCNA6PVL3 124 aa13.45□□□□□ -0.26
HMGN1-207ENST00000436324 H3BP45 60 aa13.45□□□□□ -0.26
HMGN1-207ENST00000436324 IFNA21P01568 189 aa13.45□□□□□ -0.26
HMGN1-207ENST00000436324 LYZP61626 148 aa13.45□□□□□ -0.26
HMGN1-207ENST00000436324 EWSR1Q01844 656 aaKnown RBP eCLIP13.45□□□□□ -0.26
HMGN1-207ENST00000436324 STHQ8IWL8 128 aa13.45□□□□□ -0.26
HMGN1-207ENST00000436324 DCANP1Q8TF63 244 aa13.45□□□□□ -0.26
HMGN1-207ENST00000436324 LCE6AA0A183 80 aa13.44□□□□□ -0.26
HMGN1-207ENST00000436324 PLA2G10O15496 165 aa13.44□□□□□ -0.26
HMGN1-207ENST00000436324 CA1P00915 261 aaPredicted RBP13.44□□□□□ -0.26
HMGN1-207ENST00000436324 POLR2GP62487 172 aaKnown RBP eCLIP13.44□□□□□ -0.26
HMGN1-207ENST00000436324 PMS2P11Q13670 270 aa13.44□□□□□ -0.26
HMGN1-207ENST00000436324 BUB3O43684 328 aa13.43□□□□□ -0.26
HMGN1-207ENST00000436324 AP2S1P53680 142 aaPredicted RBP13.43□□□□□ -0.26
HMGN1-207ENST00000436324 ID3Q02535 119 aa13.43□□□□□ -0.26
HMGN1-207ENST00000436324 PSMG4Q5JS54 123 aa13.43□□□□□ -0.26
HMGN1-207ENST00000436324 SIGLEC15Q6ZMC9 328 aa13.43□□□□□ -0.26
HMGN1-207ENST00000436324 RARRES2Q99969 163 aa13.43□□□□□ -0.26
HMGN1-207ENST00000436324 STRAPQ9Y3F4 350 aaKnown RBP13.43□□□□□ -0.26
HMGN1-207ENST00000436324 TENM2Q9NT68 2774 aa13.43□□□□□ -0.26
HMGN1-207ENST00000436324 CXorf65A6NEN9 183 aa13.42□□□□□ -0.26
HMGN1-207ENST00000436324 LYRM1O43325 122 aa13.42□□□□□ -0.26
HMGN1-207ENST00000436324 FABP1P07148 127 aa13.42□□□□□ -0.26
HMGN1-207ENST00000436324 NKX2-1P43699 371 aaPredicted RBP13.42□□□□□ -0.26
HMGN1-207ENST00000436324 OR4D5Q8NGN0 318 aa13.42□□□□□ -0.26
HMGN1-207ENST00000436324 PPP1R14BQ96C90 147 aa13.42□□□□□ -0.26
HMGN1-207ENST00000436324 TRGV9Q99603 122 aa13.42□□□□□ -0.26
HMGN1-207ENST00000436324 PSENENQ9NZ42 101 aa13.42□□□□□ -0.26
HMGN1-207ENST00000436324 DYNC2H1Q8NCM8 4307 aaKnown RBP13.42□□□□□ -0.26
HMGN1-207ENST00000436324 IGKV1OR2-108A0A075B7D4 117 aa13.41□□□□□ -0.26
HMGN1-207ENST00000436324 SNRPGP15A8MWD9 76 aa13.41□□□□□ -0.26
HMGN1-207ENST00000436324 PRSS46E5RG02 174 aa13.41□□□□□ -0.26
HMGN1-207ENST00000436324 SSSCA1O60232 199 aa13.41□□□□□ -0.26
HMGN1-207ENST00000436324 SCGB1D2O95969 90 aa13.41□□□□□ -0.26
HMGN1-207ENST00000436324 ACTL10Q5JWF8 245 aa13.41□□□□□ -0.26
HMGN1-207ENST00000436324 THAP8Q8NA92 274 aa13.41□□□□□ -0.26
HMGN1-207ENST00000436324 OR11H2Q8NH07 326 aa13.41□□□□□ -0.26
HMGN1-207ENST00000436324 C20orf85Q9H1P6 137 aa13.41□□□□□ -0.26
HMGN1-207ENST00000436324 GSKIPQ9P0R6 139 aa13.41□□□□□ -0.26
HMGN1-207ENST00000436324 PFDN2Q9UHV9 154 aa13.41□□□□□ -0.26
HMGN1-207ENST00000436324 TRAV6A0A075B6T7 132 aa13.4□□□□□ -0.26
HMGN1-207ENST00000436324 AKR1C1Q04828 323 aa13.4□□□□□ -0.26
HMGN1-207ENST00000436324 IAH1Q2TAA2 248 aaPredicted RBP13.4□□□□□ -0.26
HMGN1-207ENST00000436324 OR8G2PQ6IF36 304 aa13.4□□□□□ -0.26
HMGN1-207ENST00000436324 GSG1LQ6UXU4 331 aa13.4□□□□□ -0.26
HMGN1-207ENST00000436324 TRPT1Q86TN4 253 aaKnown RBP13.4□□□□□ -0.26
HMGN1-207ENST00000436324 GATAD1Q8WUU5 269 aa13.4□□□□□ -0.26
HMGN1-207ENST00000436324 NRN1Q9NPD7 142 aa13.4□□□□□ -0.26
HMGN1-207ENST00000436324 RYR3Q15413 4870 aa13.4□□□□□ -0.26
HMGN1-207ENST00000436324 SMCO3A2RU48 225 aa13.39□□□□□ -0.27
HMGN1-207ENST00000436324 TCRBP04435 133 aa13.39□□□□□ -0.27
HMGN1-207ENST00000436324 GATA2P23769 480 aaPredicted RBP13.39□□□□□ -0.27
HMGN1-207ENST00000436324 CNPY1Q3B7I2 92 aa13.39□□□□□ -0.27
HMGN1-207ENST00000436324 ACOT7LQ6ZUV0 252 aa13.39□□□□□ -0.27
HMGN1-207ENST00000436324 MITD1Q8WV92 249 aa13.39□□□□□ -0.27
HMGN1-207ENST00000436324 RAB40CQ96S21 281 aa13.39□□□□□ -0.27
HMGN1-207ENST00000436324 CCSO14618 274 aa13.38□□□□□ -0.27
HMGN1-207ENST00000436324 CCNKO75909 580 aa13.38□□□□□ -0.27
HMGN1-207ENST00000436324 NUP62P37198 522 aaPredicted RBP13.38□□□□□ -0.27
HMGN1-207ENST00000436324 SNRPD3P62318 126 aaKnown RBP13.38□□□□□ -0.27
HMGN1-207ENST00000436324 ZBTB8BQ8NAP8 495 aaPredicted RBP13.38□□□□□ -0.27
HMGN1-207ENST00000436324 STARD9Q9P2P6 4700 aa13.38□□□□□ -0.27
HMGN1-207ENST00000436324 DEFB4AO15263 64 aa13.37□□□□□ -0.27
HMGN1-207ENST00000436324 JTBO76095 146 aa13.37□□□□□ -0.27
HMGN1-207ENST00000436324 GIG44P09565 113 aaPredicted RBP13.37□□□□□ -0.27
HMGN1-207ENST00000436324 PAX9P55771 341 aa13.37□□□□□ -0.27
HMGN1-207ENST00000436324 RRAS2P62070 204 aaPredicted RBP13.37□□□□□ -0.27
HMGN1-207ENST00000436324 TMEM182Q6ZP80 229 aaPredicted RBP13.37□□□□□ -0.27
HMGN1-207ENST00000436324 TMEM217Q8N7C4 229 aa13.37□□□□□ -0.27
HMGN1-207ENST00000436324 SMIM8Q96KF7 97 aa13.37□□□□□ -0.27
HMGN1-207ENST00000436324 SEC22CQ9BRL7 303 aa13.37□□□□□ -0.27
HMGN1-207ENST00000436324 CCDC32Q9BV29 185 aa13.37□□□□□ -0.27
HMGN1-207ENST00000436324 CSMD3Q7Z407 3707 aa13.37□□□□□ -0.27
HMGN1-207ENST00000436324 FAM25EA8MYX2 175 aa13.36□□□□□ -0.27
HMGN1-207ENST00000436324 METTL15P1P0C7V9 234 aa13.36□□□□□ -0.27
HMGN1-207ENST00000436324 ORM2P19652 201 aa13.36□□□□□ -0.27
HMGN1-207ENST00000436324 C4BPBP20851 252 aa13.36□□□□□ -0.27
HMGN1-207ENST00000436324 MORN3Q6PF18 240 aaPredicted RBP13.36□□□□□ -0.27
HMGN1-207ENST00000436324 OR8I2Q8N0Y5 310 aa13.36□□□□□ -0.27
HMGN1-207ENST00000436324 BPIFCQ8NFQ6 507 aa13.36□□□□□ -0.27
HMGN1-207ENST00000436324 LINC00052Q96N35 136 aa13.36□□□□□ -0.27
HMGN1-207ENST00000436324 WDR12Q9GZL7 423 aaKnown RBP13.36□□□□□ -0.27
HMGN1-207ENST00000436324 NUDT15Q9NV35 164 aa13.36□□□□□ -0.27
HMGN1-207ENST00000436324 CLEC5AQ9NY25 188 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 189.2 ms