RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 UQCRFS1P47985 274 aa13.26□□□□□ -0.29
LIMK1-203ENST00000435201 SIRPDQ9H106 197 aa13.26□□□□□ -0.29
LIMK1-203ENST00000435201 RNASE7Q9H1E1 156 aaKnown RBP13.26□□□□□ -0.29
LIMK1-203ENST00000435201 CHD8Q9HCK8 2581 aa13.26□□□□□ -0.29
LIMK1-203ENST00000435201 DCHS2Q6V1P9 2916 aa13.26□□□□□ -0.29
LIMK1-203ENST00000435201 K7EIM0 57 aa13.25□□□□□ -0.29
LIMK1-203ENST00000435201 NDUFS7O75251 213 aa13.25□□□□□ -0.29
LIMK1-203ENST00000435201 NBEAP1P0C6P0 100 aa13.25□□□□□ -0.29
LIMK1-203ENST00000435201 LYZP61626 148 aa13.25□□□□□ -0.29
LIMK1-203ENST00000435201 RANP62826 216 aaKnown RBP13.25□□□□□ -0.29
LIMK1-203ENST00000435201 EBI3Q14213 229 aa13.25□□□□□ -0.29
LIMK1-203ENST00000435201 GSX1Q9H4S2 264 aaPredicted RBP13.25□□□□□ -0.29
LIMK1-203ENST00000435201 EPDR1Q9UM22 224 aa13.25□□□□□ -0.29
LIMK1-203ENST00000435201 IGHV2-70DA0A0C4DH43 119 aa13.25□□□□□ -0.29
LIMK1-203ENST00000435201 AMBPP02760 352 aa13.25□□□□□ -0.29
LIMK1-203ENST00000435201 CD24P25063 80 aa13.25□□□□□ -0.29
LIMK1-203ENST00000435201 COX19Q49B96 90 aa13.25□□□□□ -0.29
LIMK1-203ENST00000435201 FAM231DQ6ZW35 169 aa13.25□□□□□ -0.29
LIMK1-203ENST00000435201 OR8I2Q8N0Y5 310 aa13.25□□□□□ -0.29
LIMK1-203ENST00000435201 Q8N6K4 173 aa13.25□□□□□ -0.29
LIMK1-203ENST00000435201 BLNKQ8WV28 456 aa13.25□□□□□ -0.29
LIMK1-203ENST00000435201 TMEM14CQ9P0S9 112 aa13.25□□□□□ -0.29
LIMK1-203ENST00000435201 TBL2Q9Y4P3 447 aaKnown RBP13.25□□□□□ -0.29
LIMK1-203ENST00000435201 NCOR2Q9Y618 2525 aa13.24□□□□□ -0.29
LIMK1-203ENST00000435201 NPIPB5A8MRT5 1133 aa13.24□□□□□ -0.29
LIMK1-203ENST00000435201 SLC25A5P05141 298 aaKnown RBP13.24□□□□□ -0.29
LIMK1-203ENST00000435201 RD3LP0DJH9 198 aa13.24□□□□□ -0.29
LIMK1-203ENST00000435201 TMEM183BQ1AE95 376 aa13.24□□□□□ -0.29
LIMK1-203ENST00000435201 ZNF562Q6V9R5 426 aa13.24□□□□□ -0.29
LIMK1-203ENST00000435201 BAGE2Q86Y30 109 aa13.24□□□□□ -0.29
LIMK1-203ENST00000435201 TMEM190Q8WZ59 177 aa13.24□□□□□ -0.29
LIMK1-203ENST00000435201 ARPC1AQ92747 370 aa13.24□□□□□ -0.29
LIMK1-203ENST00000435201 SMIM12Q96EX1 92 aa13.24□□□□□ -0.29
LIMK1-203ENST00000435201 IGKV1-17P01599 117 aa13.23□□□□□ -0.29
LIMK1-203ENST00000435201 ADMP35318 185 aa13.23□□□□□ -0.29
LIMK1-203ENST00000435201 UBE2G1P62253 170 aa13.23□□□□□ -0.29
LIMK1-203ENST00000435201 CX3CL1P78423 397 aa13.23□□□□□ -0.29
LIMK1-203ENST00000435201 LINC00479Q96M42 142 aa13.23□□□□□ -0.29
LIMK1-203ENST00000435201 RBM14Q96PK6 669 aaKnown RBP13.23□□□□□ -0.29
LIMK1-203ENST00000435201 FAM103A1Q9BTL3 118 aaKnown RBP13.23□□□□□ -0.29
LIMK1-203ENST00000435201 SLC25A39Q9BZJ4 359 aaPredicted RBP13.23□□□□□ -0.29
LIMK1-203ENST00000435201 SMIM27A0A1W2PRY6 76 aa13.23□□□□□ -0.29
LIMK1-203ENST00000435201 PGPA6NDG6 321 aa13.23□□□□□ -0.29
LIMK1-203ENST00000435201 C19orf84I3L1E1 186 aa13.23□□□□□ -0.29
LIMK1-203ENST00000435201 CBLN1P23435 193 aa13.23□□□□□ -0.29
LIMK1-203ENST00000435201 WDR73Q6P4I2 378 aa13.23□□□□□ -0.29
LIMK1-203ENST00000435201 DYNAPQ8N1N2 210 aa13.23□□□□□ -0.29
LIMK1-203ENST00000435201 C5orf17Q8NAS9 161 aa13.23□□□□□ -0.29
LIMK1-203ENST00000435201 TMEM18Q96B42 140 aa13.23□□□□□ -0.29
LIMK1-203ENST00000435201 CHRDL1Q9BU40 450 aa13.23□□□□□ -0.29
LIMK1-203ENST00000435201 GNB1LQ9BYB4 327 aa13.23□□□□□ -0.29
LIMK1-203ENST00000435201 MRPL18Q9H0U6 180 aaKnown RBP13.23□□□□□ -0.29
LIMK1-203ENST00000435201 SPTBN1Q01082 2364 aaKnown RBP13.22□□□□□ -0.29
LIMK1-203ENST00000435201 ITPR1Q14643 2758 aa13.22□□□□□ -0.29
LIMK1-203ENST00000435201 TRAV30A0A087WSZ9 112 aa13.22□□□□□ -0.29
LIMK1-203ENST00000435201 NCBP2LA6PVI3 153 aaKnown RBP13.22□□□□□ -0.29
LIMK1-203ENST00000435201 ZNF705GA8MUZ8 300 aaPredicted RBP13.22□□□□□ -0.29
LIMK1-203ENST00000435201 TOX4O94842 621 aa13.22□□□□□ -0.29
LIMK1-203ENST00000435201 TOMM40O96008 361 aa13.22□□□□□ -0.29
LIMK1-203ENST00000435201 MT-ND6P03923 174 aa13.22□□□□□ -0.29
LIMK1-203ENST00000435201 ZNF600Q6ZNG1 722 aa13.22□□□□□ -0.29
LIMK1-203ENST00000435201 IGFBPL1Q8WX77 278 aa13.22□□□□□ -0.29
LIMK1-203ENST00000435201 ZNF48Q96MX3 618 aaPredicted RBP13.22□□□□□ -0.29
LIMK1-203ENST00000435201 ATG101Q9BSB4 218 aa13.22□□□□□ -0.29
LIMK1-203ENST00000435201 SERTAD4Q9NUC0 356 aa13.22□□□□□ -0.29
LIMK1-203ENST00000435201 MRPL27Q9P0M9 148 aaKnown RBP13.22□□□□□ -0.29
LIMK1-203ENST00000435201 KLF12Q9Y4X4 402 aa13.22□□□□□ -0.29
LIMK1-203ENST00000435201 TMEM11P17152 192 aa13.21□□□□□ -0.29
LIMK1-203ENST00000435201 IER3P46695 156 aa13.21□□□□□ -0.29
LIMK1-203ENST00000435201 UBE2E1P51965 193 aa13.21□□□□□ -0.29
LIMK1-203ENST00000435201 GNG5P63218 68 aa13.21□□□□□ -0.29
LIMK1-203ENST00000435201 FBLN7Q53RD9 439 aa13.21□□□□□ -0.29
LIMK1-203ENST00000435201 TTC9CQ8N5M4 171 aa13.21□□□□□ -0.29
LIMK1-203ENST00000435201 NHLRC2Q8NBF2 726 aa13.21□□□□□ -0.29
LIMK1-203ENST00000435201 TMEM68Q96MH6 324 aa13.21□□□□□ -0.29
LIMK1-203ENST00000435201 IGLV11-55A0A075B6I3 123 aa13.21□□□□□ -0.3
LIMK1-203ENST00000435201 TRAV34A0A0B4J273 112 aa13.21□□□□□ -0.3
LIMK1-203ENST00000435201 SNURFLB1AK76 121 aa13.21□□□□□ -0.3
LIMK1-203ENST00000435201 SNRPCP09234 159 aaKnown RBP13.21□□□□□ -0.3
LIMK1-203ENST00000435201 HIST1H1EP10412 219 aaKnown RBP13.21□□□□□ -0.3
LIMK1-203ENST00000435201 LEMD1Q68G75 181 aa13.21□□□□□ -0.3
LIMK1-203ENST00000435201 GBGT1Q8N5D6 347 aa13.21□□□□□ -0.3
LIMK1-203ENST00000435201 FMC1Q96HJ9 113 aa13.21□□□□□ -0.3
LIMK1-203ENST00000435201 Q9H3A6 140 aa13.21□□□□□ -0.3
LIMK1-203ENST00000435201 OTORQ9NRC9 128 aa13.21□□□□□ -0.3
LIMK1-203ENST00000435201 RNF24Q9Y225 148 aa13.21□□□□□ -0.3
LIMK1-203ENST00000435201 TMEM8BA6NDV4 472 aa13.2□□□□□ -0.3
LIMK1-203ENST00000435201 GATCO43716 136 aaKnown RBP13.2□□□□□ -0.3
LIMK1-203ENST00000435201 FAM106CPP0CH98 169 aa13.2□□□□□ -0.3
LIMK1-203ENST00000435201 JOSD1Q15040 202 aaPredicted RBP13.2□□□□□ -0.3
LIMK1-203ENST00000435201 ASPHD1Q5U4P2 390 aa13.2□□□□□ -0.3
LIMK1-203ENST00000435201 S100A7AQ86SG5 101 aa13.2□□□□□ -0.3
LIMK1-203ENST00000435201 OR5R1Q8NH85 324 aa13.2□□□□□ -0.3
LIMK1-203ENST00000435201 SHANK2-AS3Q9BTD1 123 aa13.2□□□□□ -0.3
LIMK1-203ENST00000435201 BPESC1Q9GZL8 116 aa13.2□□□□□ -0.3
LIMK1-203ENST00000435201 C1RLQ9NZP8 487 aa13.2□□□□□ -0.3
LIMK1-203ENST00000435201 OVOL3O00110 214 aa13.19□□□□□ -0.3
LIMK1-203ENST00000435201 LMO4P61968 165 aa13.19□□□□□ -0.3
LIMK1-203ENST00000435201 GRAMD2BQ96HH9 432 aa13.19□□□□□ -0.3
LIMK1-203ENST00000435201 GPR82Q96P67 336 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms