RNA–Protein interactions for RNA: ENST00000435142.1

USP9YP28-201, Transcript of USP9Y pseudogene 28, humanhuman

BASIC

Gene USP9YP28, Length 589 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9YP28-201ENST00000435142 EIF5AP63241 154 aaKnown RBP0.38□□□□□ -2.35
USP9YP28-201ENST00000435142 SPA17Q15506 151 aa0.38□□□□□ -2.35
USP9YP28-201ENST00000435142 LYRM7Q5U5X0 104 aa0.38□□□□□ -2.35
USP9YP28-201ENST00000435142 CLECL1Q8IZS7 167 aa0.38□□□□□ -2.35
USP9YP28-201ENST00000435142 LINC00301Q8NCQ3 95 aa0.38□□□□□ -2.35
USP9YP28-201ENST00000435142 OR2T10Q8NGZ9 312 aa0.38□□□□□ -2.35
USP9YP28-201ENST00000435142 FAM172AQ8WUF8 416 aa0.38□□□□□ -2.35
USP9YP28-201ENST00000435142 AMELYQ99218 206 aa0.38□□□□□ -2.35
USP9YP28-201ENST00000435142 UCK1Q9HA47 277 aa0.38□□□□□ -2.35
USP9YP28-201ENST00000435142 UBAP1Q9NZ09 502 aa0.38□□□□□ -2.35
USP9YP28-201ENST00000435142 NCOA1Q15788 1441 aa0.38□□□□□ -2.35
USP9YP28-201ENST00000435142 MYO3BQ8WXR4 1341 aa0.38□□□□□ -2.35
USP9YP28-201ENST00000435142 MED12Q93074 2177 aa0.38□□□□□ -2.35
USP9YP28-201ENST00000435142 CCDC88AQ3V6T2 1871 aa0.37□□□□□ -2.35
USP9YP28-201ENST00000435142 HECW2Q9P2P5 1572 aa0.37□□□□□ -2.35
USP9YP28-201ENST00000435142 TNRC6BQ9UPQ9 1833 aaKnown RBP0.37□□□□□ -2.35
USP9YP28-201ENST00000435142 TMEM114B3SHH9 223 aa0.37□□□□□ -2.35
USP9YP28-201ENST00000435142 CCL25O15444 150 aa0.37□□□□□ -2.35
USP9YP28-201ENST00000435142 CCL16O15467 120 aa0.37□□□□□ -2.35
USP9YP28-201ENST00000435142 SRIP30626 198 aa0.37□□□□□ -2.35
USP9YP28-201ENST00000435142 RNASE4P34096 147 aaKnown RBP0.37□□□□□ -2.35
USP9YP28-201ENST00000435142 SRP14P37108 136 aaKnown RBP0.37□□□□□ -2.35
USP9YP28-201ENST00000435142 DYNLT1P63172 113 aa0.37□□□□□ -2.35
USP9YP28-201ENST00000435142 RRN3P1Q2M238 152 aa0.37□□□□□ -2.35
USP9YP28-201ENST00000435142 AKIRIN2Q53H80 203 aa0.37□□□□□ -2.35
USP9YP28-201ENST00000435142 SLC30A7Q8NEW0 376 aa0.37□□□□□ -2.35
USP9YP28-201ENST00000435142 OR11H6Q8NGC7 330 aa0.37□□□□□ -2.35
USP9YP28-201ENST00000435142 OR2T35Q8NGX2 323 aa0.37□□□□□ -2.35
USP9YP28-201ENST00000435142 GNPDA2Q8TDQ7 276 aa0.37□□□□□ -2.35
USP9YP28-201ENST00000435142 BORCS5Q969J3 196 aa0.37□□□□□ -2.35
USP9YP28-201ENST00000435142 SLAMF6Q96DU3 332 aa0.37□□□□□ -2.35
USP9YP28-201ENST00000435142 BTF3L4Q96K17 158 aa0.37□□□□□ -2.35
USP9YP28-201ENST00000435142 GPER1Q99527 375 aa0.37□□□□□ -2.35
USP9YP28-201ENST00000435142 SIGMAR1Q99720 223 aa0.37□□□□□ -2.35
USP9YP28-201ENST00000435142 PRADC1Q9BSG0 188 aa0.37□□□□□ -2.35
USP9YP28-201ENST00000435142 KIFC1Q9BW19 673 aa0.37□□□□□ -2.35
USP9YP28-201ENST00000435142 NMNAT1Q9HAN9 279 aaPredicted RBP0.37□□□□□ -2.35
USP9YP28-201ENST00000435142 CHCHD2Q9Y6H1 151 aaPredicted RBP0.37□□□□□ -2.35
USP9YP28-201ENST00000435142 DOCK5Q9H7D0 1870 aa0.37□□□□□ -2.35
USP9YP28-201ENST00000435142 PIK3C2GO75747 1445 aa0.37□□□□□ -2.35
USP9YP28-201ENST00000435142 MED1Q15648 1581 aaPredicted RBP0.36□□□□□ -2.35
USP9YP28-201ENST00000435142 EML6Q6ZMW3 1958 aa0.36□□□□□ -2.35
USP9YP28-201ENST00000435142 TRBV19A0A075B6N1 114 aa0.36□□□□□ -2.35
USP9YP28-201ENST00000435142 TRGV10A0A0A0MS01 117 aa0.36□□□□□ -2.35
USP9YP28-201ENST00000435142 TCRBV4S1A1TA0A5B7 111 aa0.36□□□□□ -2.35
USP9YP28-201ENST00000435142 GADD45GO95257 159 aa0.36□□□□□ -2.35
USP9YP28-201ENST00000435142 ERP29P30040 261 aaKnown RBP0.36□□□□□ -2.35
USP9YP28-201ENST00000435142 PIGPP57054 158 aa0.36□□□□□ -2.35
USP9YP28-201ENST00000435142 KRR1Q13601 381 aaKnown RBP0.36□□□□□ -2.35
USP9YP28-201ENST00000435142 FAM74A1Q5RGS3 127 aa0.36□□□□□ -2.35
USP9YP28-201ENST00000435142 Q8IYB0 196 aa0.36□□□□□ -2.35
USP9YP28-201ENST00000435142 Q8N6K4 173 aa0.36□□□□□ -2.35
USP9YP28-201ENST00000435142 MNS1Q8NEH6 495 aa0.36□□□□□ -2.35
USP9YP28-201ENST00000435142 TMEM254Q8TBM7 123 aa0.36□□□□□ -2.35
USP9YP28-201ENST00000435142 STAG3L4Q8TBR4 150 aa0.36□□□□□ -2.35
USP9YP28-201ENST00000435142 PATE1Q8WXA2 126 aa0.36□□□□□ -2.35
USP9YP28-201ENST00000435142 LINC00467Q9BRT7 94 aa0.36□□□□□ -2.35
USP9YP28-201ENST00000435142 TMEM70Q9BUB7 260 aa0.36□□□□□ -2.35
USP9YP28-201ENST00000435142 IMUPQ9GZP8 106 aa0.36□□□□□ -2.35
USP9YP28-201ENST00000435142 TMEM126AQ9H061 195 aa0.36□□□□□ -2.35
USP9YP28-201ENST00000435142 TLNRD1Q9H1K6 362 aa0.36□□□□□ -2.35
USP9YP28-201ENST00000435142 CCDC144AA2RUR9 1427 aa0.36□□□□□ -2.35
USP9YP28-201ENST00000435142 TRAV4A0A0B4J268 109 aa0.35□□□□□ -2.35
USP9YP28-201ENST00000435142 TRBV6-4A0A1B0GX49 114 aa0.35□□□□□ -2.35
USP9YP28-201ENST00000435142 A8MWV9 139 aa0.35□□□□□ -2.35
USP9YP28-201ENST00000435142 NCR3O14931 201 aa0.35□□□□□ -2.35
USP9YP28-201ENST00000435142 NUPR1O60356 82 aa0.35□□□□□ -2.35
USP9YP28-201ENST00000435142 TIMM17BO60830 172 aa0.35□□□□□ -2.35
USP9YP28-201ENST00000435142 CTXN2P0C2S0 81 aa0.35□□□□□ -2.35
USP9YP28-201ENST00000435142 DEFA3P59666 94 aa0.35□□□□□ -2.35
USP9YP28-201ENST00000435142 ERVS71-1P61550 626 aa0.35□□□□□ -2.35
USP9YP28-201ENST00000435142 PSG9Q00887 426 aa0.35□□□□□ -2.35
USP9YP28-201ENST00000435142 LIN52Q52LA3 116 aa0.35□□□□□ -2.35
USP9YP28-201ENST00000435142 C22orf39Q6P5X5 142 aa0.35□□□□□ -2.35
USP9YP28-201ENST00000435142 SBSPONQ8IVN8 264 aa0.35□□□□□ -2.35
USP9YP28-201ENST00000435142 PDZD9Q8IXQ8 264 aa0.35□□□□□ -2.35
USP9YP28-201ENST00000435142 ST6GALNAC3Q8NDV1 305 aa0.35□□□□□ -2.35
USP9YP28-201ENST00000435142 YPEL2Q96QA6 119 aa0.35□□□□□ -2.35
USP9YP28-201ENST00000435142 TP53RKQ96S44 253 aa0.35□□□□□ -2.35
USP9YP28-201ENST00000435142 TMEM14CQ9P0S9 112 aa0.35□□□□□ -2.35
USP9YP28-201ENST00000435142 HECW1Q76N89 1606 aa0.35□□□□□ -2.35
USP9YP28-201ENST00000435142 LAMB4A4D0S4 1761 aa0.34□□□□□ -2.35
USP9YP28-201ENST00000435142 TNRC6AQ8NDV7 1962 aaKnown RBP0.34□□□□□ -2.35
USP9YP28-201ENST00000435142 IGHV1-58A0A0C4DH39 117 aa0.34□□□□□ -2.36
USP9YP28-201ENST00000435142 A0A1W2PPM0 123 aa0.34□□□□□ -2.36
USP9YP28-201ENST00000435142 ROMO1P60602 79 aa0.34□□□□□ -2.36
USP9YP28-201ENST00000435142 FADDQ13158 208 aa0.34□□□□□ -2.36
USP9YP28-201ENST00000435142 FMN1Q68DA7 1419 aa0.34□□□□□ -2.36
USP9YP28-201ENST00000435142 C2orf82Q6UX34 121 aa0.34□□□□□ -2.36
USP9YP28-201ENST00000435142 LINC00322Q6ZN03 302 aaPredicted RBP0.34□□□□□ -2.36
USP9YP28-201ENST00000435142 KRTAP19-3Q7Z4W3 81 aa0.34□□□□□ -2.36
USP9YP28-201ENST00000435142 GKN2Q86XP6 184 aa0.34□□□□□ -2.36
USP9YP28-201ENST00000435142 ORMDL1Q9P0S3 153 aa0.34□□□□□ -2.36
USP9YP28-201ENST00000435142 LY96Q9Y6Y9 160 aa0.34□□□□□ -2.36
USP9YP28-201ENST00000435142 SNRNP200O75643 2136 aaKnown RBP0.34□□□□□ -2.36
USP9YP28-201ENST00000435142 SCN3AQ9NY46 2000 aa0.33□□□□□ -2.36
USP9YP28-201ENST00000435142 ZNF106Q9H2Y7 1883 aaKnown RBP0.33□□□□□ -2.36
USP9YP28-201ENST00000435142 TLCD2A6NGC4 264 aa0.33□□□□□ -2.36
USP9YP28-201ENST00000435142 FAM159BA6NKW6 160 aa0.33□□□□□ -2.36
USP9YP28-201ENST00000435142 E7EUB6 86 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms