RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 CT83Q5H943 113 aa8.31□□□□□ -1.08
CD44-210ENST00000434472 KIR2DL5AQ8N109 375 aa8.31□□□□□ -1.08
CD44-210ENST00000434472 BLNKQ8WV28 456 aa8.31□□□□□ -1.08
CD44-210ENST00000434472 LINC00479Q96M42 142 aa8.31□□□□□ -1.08
CD44-210ENST00000434472 TMEM68Q96MH6 324 aa8.31□□□□□ -1.08
CD44-210ENST00000434472 TBX15Q96SF7 602 aa8.31□□□□□ -1.08
CD44-210ENST00000434472 RASL11BQ9BPW5 248 aa8.31□□□□□ -1.08
CD44-210ENST00000434472 C2orf88Q9BSF0 95 aa8.31□□□□□ -1.08
CD44-210ENST00000434472 OTORQ9NRC9 128 aa8.31□□□□□ -1.08
CD44-210ENST00000434472 CBLN4Q9NTU7 201 aa8.31□□□□□ -1.08
CD44-210ENST00000434472 MRPL27Q9P0M9 148 aaKnown RBP8.31□□□□□ -1.08
CD44-210ENST00000434472 POLR3KQ9Y2Y1 108 aaPredicted RBP8.31□□□□□ -1.08
CD44-210ENST00000434472 SOX21Q9Y651 276 aaPredicted RBP8.31□□□□□ -1.08
CD44-210ENST00000434472 TRBV6-1A0A0K0K1D8 114 aa8.3□□□□□ -1.08
CD44-210ENST00000434472 BMPR1BO00238 502 aa8.3□□□□□ -1.08
CD44-210ENST00000434472 NBR2O15453 112 aa8.3□□□□□ -1.08
CD44-210ENST00000434472 SIAH2O43255 324 aa8.3□□□□□ -1.08
CD44-210ENST00000434472 ZNF253O75346 499 aa8.3□□□□□ -1.08
CD44-210ENST00000434472 CNIH1O95406 144 aa8.3□□□□□ -1.08
CD44-210ENST00000434472 GPX1P07203 203 aa8.3□□□□□ -1.08
CD44-210ENST00000434472 GNG5P63218 68 aa8.3□□□□□ -1.08
CD44-210ENST00000434472 Q6ZWC4 215 aa8.3□□□□□ -1.08
CD44-210ENST00000434472 NHLRC2Q8NBF2 726 aa8.3□□□□□ -1.08
CD44-210ENST00000434472 NPBQ8NG41 125 aa8.3□□□□□ -1.08
CD44-210ENST00000434472 KCNS1Q96KK3 526 aa8.3□□□□□ -1.08
CD44-210ENST00000434472 WNT10AQ9GZT5 417 aa8.3□□□□□ -1.08
CD44-210ENST00000434472 Q9H3A6 140 aa8.3□□□□□ -1.08
CD44-210ENST00000434472 C7orf69Q9H7B7 122 aa8.3□□□□□ -1.08
CD44-210ENST00000434472 CELSR3Q9NYQ7 3312 aa8.3□□□□□ -1.08
CD44-210ENST00000434472 LOC105371242A0A075B767 164 aa8.29□□□□□ -1.08
CD44-210ENST00000434472 TRAV30A0A087WSZ9 112 aa8.29□□□□□ -1.08
CD44-210ENST00000434472 A8MWL6 223 aa8.29□□□□□ -1.08
CD44-210ENST00000434472 TIMM23O14925 209 aa8.29□□□□□ -1.08
CD44-210ENST00000434472 NDUFA3O95167 84 aa8.29□□□□□ -1.08
CD44-210ENST00000434472 TCRAP04437 139 aa8.29□□□□□ -1.08
CD44-210ENST00000434472 FRMD6-AS1P0C7T7 363 aa8.29□□□□□ -1.08
CD44-210ENST00000434472 PSG1P11464 419 aa8.29□□□□□ -1.08
CD44-210ENST00000434472 SRIP30626 198 aa8.29□□□□□ -1.08
CD44-210ENST00000434472 LYZP61626 148 aa8.29□□□□□ -1.08
CD44-210ENST00000434472 FAM162BQ5T6X4 162 aa8.29□□□□□ -1.08
CD44-210ENST00000434472 TEX43Q6ZNM6 134 aa8.29□□□□□ -1.08
CD44-210ENST00000434472 LINC00469Q8N7U9 141 aa8.29□□□□□ -1.08
CD44-210ENST00000434472 NUP35Q8NFH5 326 aa8.29□□□□□ -1.08
CD44-210ENST00000434472 FAM168AQ92567 244 aa8.29□□□□□ -1.08
CD44-210ENST00000434472 MLST8Q9BVC4 326 aa8.29□□□□□ -1.08
CD44-210ENST00000434472 RPP21Q9H633 154 aaKnown RBP8.29□□□□□ -1.08
CD44-210ENST00000434472 RP1L1Q8IWN7 2480 aaPredicted RBP8.29□□□□□ -1.08
CD44-210ENST00000434472 IGHV3-21A0A0B4J1V1 117 aa8.29□□□□□ -1.08
CD44-210ENST00000434472 FAM231BA6NCW3 169 aa8.29□□□□□ -1.08
CD44-210ENST00000434472 OOSP1A8MZH6 123 aa8.29□□□□□ -1.08
CD44-210ENST00000434472 OR2J3O76001 311 aa8.29□□□□□ -1.08
CD44-210ENST00000434472 LTAP01374 205 aa8.29□□□□□ -1.08
CD44-210ENST00000434472 PRTN3P24158 256 aa8.29□□□□□ -1.08
CD44-210ENST00000434472 SLC35B1P78383 322 aa8.29□□□□□ -1.08
CD44-210ENST00000434472 KLF5Q13887 457 aaPredicted RBP8.29□□□□□ -1.08
CD44-210ENST00000434472 MMDQ15546 238 aa8.29□□□□□ -1.08
CD44-210ENST00000434472 RUSC1-AS1Q66K80 236 aa8.29□□□□□ -1.08
CD44-210ENST00000434472 PRR27Q6MZM9 219 aa8.29□□□□□ -1.08
CD44-210ENST00000434472 TOMM20LQ6UXN7 152 aa8.29□□□□□ -1.08
CD44-210ENST00000434472 UNQ6494/PRO21346Q6UXR6 183 aa8.29□□□□□ -1.08
CD44-210ENST00000434472 ZNF600Q6ZNG1 722 aa8.29□□□□□ -1.08
CD44-210ENST00000434472 C1orf122Q6ZSJ8 110 aa8.29□□□□□ -1.08
CD44-210ENST00000434472 MRPL52Q86TS9 123 aaKnown RBP8.29□□□□□ -1.08
CD44-210ENST00000434472 KIR3DL3Q8N743 410 aa8.29□□□□□ -1.08
CD44-210ENST00000434472 OR4B1Q8NGF8 309 aa8.29□□□□□ -1.08
CD44-210ENST00000434472 DAZAP1Q96EP5 407 aaKnown RBP8.29□□□□□ -1.08
CD44-210ENST00000434472 C20orf144Q9BQM9 153 aa8.29□□□□□ -1.08
CD44-210ENST00000434472 SSBP3Q9BWW4 388 aaPredicted RBP8.29□□□□□ -1.08
CD44-210ENST00000434472 SLC25A39Q9BZJ4 359 aaPredicted RBP8.29□□□□□ -1.08
CD44-210ENST00000434472 GFRA4Q9GZZ7 299 aa8.29□□□□□ -1.08
CD44-210ENST00000434472 ARFGEF3Q5TH69 2177 aa8.28□□□□□ -1.08
CD44-210ENST00000434472 DSPP15924 2871 aaKnown RBP8.28□□□□□ -1.08
CD44-210ENST00000434472 ODF3BA8MYP8 253 aa8.28□□□□□ -1.08
CD44-210ENST00000434472 P01737 135 aa8.28□□□□□ -1.08
CD44-210ENST00000434472 APELAP0DMC3 54 aa8.28□□□□□ -1.08
CD44-210ENST00000434472 GRNP28799 593 aaKnown RBP8.28□□□□□ -1.08
CD44-210ENST00000434472 GPR6P46095 362 aaPredicted RBP8.28□□□□□ -1.08
CD44-210ENST00000434472 DLX1P56177 255 aa8.28□□□□□ -1.08
CD44-210ENST00000434472 SSTP61278 116 aa8.28□□□□□ -1.08
CD44-210ENST00000434472 ADORA2A-AS1P86434 159 aa8.28□□□□□ -1.08
CD44-210ENST00000434472 KIAA1644Q3SXP7 199 aa8.28□□□□□ -1.08
CD44-210ENST00000434472 C11orf71Q6IPW1 123 aa8.28□□□□□ -1.08
CD44-210ENST00000434472 CCDC144NLQ6NUI1 221 aa8.28□□□□□ -1.08
CD44-210ENST00000434472 C19orf35Q6ZS72 473 aa8.28□□□□□ -1.08
CD44-210ENST00000434472 LYPD1Q8N2G4 141 aa8.28□□□□□ -1.08
CD44-210ENST00000434472 OR4F17Q8NGA8 305 aa8.28□□□□□ -1.08
CD44-210ENST00000434472 CFHR4Q92496 578 aa8.28□□□□□ -1.08
CD44-210ENST00000434472 NEU1Q99519 415 aa8.28□□□□□ -1.08
CD44-210ENST00000434472 PRSS22Q9GZN4 317 aa8.28□□□□□ -1.08
CD44-210ENST00000434472 RPH3ALQ9UNE2 315 aa8.28□□□□□ -1.08
CD44-210ENST00000434472 ZFHX2Q9C0A1 2572 aaPredicted RBP8.28□□□□□ -1.08
CD44-210ENST00000434472 A0A1W2PS18 150 aa8.27□□□□□ -1.09
CD44-210ENST00000434472 C19orf71A6NCJ1 209 aa8.27□□□□□ -1.09
CD44-210ENST00000434472 F2Z2F3 143 aa8.27□□□□□ -1.09
CD44-210ENST00000434472 H3BRN7 92 aa8.27□□□□□ -1.09
CD44-210ENST00000434472 K7EIM0 57 aa8.27□□□□□ -1.09
CD44-210ENST00000434472 ZNF324O75467 553 aaPredicted RBP8.27□□□□□ -1.09
CD44-210ENST00000434472 SCGB2A1O75556 95 aa8.27□□□□□ -1.09
CD44-210ENST00000434472 CA1P00915 261 aaPredicted RBP8.27□□□□□ -1.09
CD44-210ENST00000434472 AMTP48728 403 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms