RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 POLR3KQ9Y2Y1 108 aaPredicted RBP5.97□□□□□ -1.45
COL17A1-204ENST00000433822 NIPBLQ6KC79 2804 aaeCLIP5.97□□□□□ -1.45
COL17A1-204ENST00000433822 ABCA2Q9BZC7 2435 aa5.96□□□□□ -1.45
COL17A1-204ENST00000433822 IGHV2-26A0A0B4J1V2 119 aa5.96□□□□□ -1.46
COL17A1-204ENST00000433822 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.96□□□□□ -1.46
COL17A1-204ENST00000433822 IGLC7A0M8Q6 106 aa5.96□□□□□ -1.46
COL17A1-204ENST00000433822 HELTA6NFD8 242 aa5.96□□□□□ -1.46
COL17A1-204ENST00000433822 AMBPP02760 352 aa5.96□□□□□ -1.46
COL17A1-204ENST00000433822 LGALS4P56470 323 aa5.96□□□□□ -1.46
COL17A1-204ENST00000433822 WT1-ASQ06250 92 aa5.96□□□□□ -1.46
COL17A1-204ENST00000433822 MRGPRG-AS1Q2M3A8 158 aa5.96□□□□□ -1.46
COL17A1-204ENST00000433822 TIGITQ495A1 244 aa5.96□□□□□ -1.46
COL17A1-204ENST00000433822 SPATA31B1PQ5VZV4 182 aa5.96□□□□□ -1.46
COL17A1-204ENST00000433822 WDR73Q6P4I2 378 aa5.96□□□□□ -1.46
COL17A1-204ENST00000433822 LYPD2Q6UXB3 125 aa5.96□□□□□ -1.46
COL17A1-204ENST00000433822 OR1L6Q8NGR2 347 aa5.96□□□□□ -1.46
COL17A1-204ENST00000433822 SGMS2Q8NHU3 365 aa5.96□□□□□ -1.46
COL17A1-204ENST00000433822 DERL1Q9BUN8 251 aa5.96□□□□□ -1.46
COL17A1-204ENST00000433822 HINT2Q9BX68 163 aa5.96□□□□□ -1.46
COL17A1-204ENST00000433822 CLEC7AQ9BXN2 247 aa5.96□□□□□ -1.46
COL17A1-204ENST00000433822 IGKV1D-37A0A075B6S9 117 aa5.95□□□□□ -1.46
COL17A1-204ENST00000433822 A0A0U1RQK1 487 aa5.95□□□□□ -1.46
COL17A1-204ENST00000433822 A0A1W2PPI3 338 aa5.95□□□□□ -1.46
COL17A1-204ENST00000433822 ZNF320A2RRD8 509 aa5.95□□□□□ -1.46
COL17A1-204ENST00000433822 XKRY2A2RUG3 117 aa5.95□□□□□ -1.46
COL17A1-204ENST00000433822 LINC00587B1AMM8 73 aa5.95□□□□□ -1.46
COL17A1-204ENST00000433822 C22orf46C9J442 243 aa5.95□□□□□ -1.46
COL17A1-204ENST00000433822 LY6LH3BQJ8 138 aa5.95□□□□□ -1.46
COL17A1-204ENST00000433822 BUB1B-PAK6H3BSN5 160 aa5.95□□□□□ -1.46
COL17A1-204ENST00000433822 M0R1W7 72 aa5.95□□□□□ -1.46
COL17A1-204ENST00000433822 COX7A2P2O60397 106 aa5.95□□□□□ -1.46
COL17A1-204ENST00000433822 OR7C2O60412 319 aa5.95□□□□□ -1.46
COL17A1-204ENST00000433822 PF4P02776 101 aa5.95□□□□□ -1.46
COL17A1-204ENST00000433822 RPL27AP46776 148 aaKnown RBP5.95□□□□□ -1.46
COL17A1-204ENST00000433822 GNG4P50150 75 aa5.95□□□□□ -1.46
COL17A1-204ENST00000433822 PKIAP61925 76 aa5.95□□□□□ -1.46
COL17A1-204ENST00000433822 PAFAH1B2P68402 229 aa5.95□□□□□ -1.46
COL17A1-204ENST00000433822 KLRB1Q12918 225 aa5.95□□□□□ -1.46
COL17A1-204ENST00000433822 PRSS8Q16651 343 aa5.95□□□□□ -1.46
COL17A1-204ENST00000433822 RPEL1Q2QD12 228 aa5.95□□□□□ -1.46
COL17A1-204ENST00000433822 ZNF672Q499Z4 452 aaPredicted RBP5.95□□□□□ -1.46
COL17A1-204ENST00000433822 C1orf122Q6ZSJ8 110 aa5.95□□□□□ -1.46
COL17A1-204ENST00000433822 MUC15Q8N387 334 aa5.95□□□□□ -1.46
COL17A1-204ENST00000433822 GBGT1Q8N5D6 347 aa5.95□□□□□ -1.46
COL17A1-204ENST00000433822 NECAP1Q8NC96 275 aa5.95□□□□□ -1.46
COL17A1-204ENST00000433822 NEU4Q8WWR8 484 aaPredicted RBP5.95□□□□□ -1.46
COL17A1-204ENST00000433822 TMEM37Q8WXS4 190 aa5.95□□□□□ -1.46
COL17A1-204ENST00000433822 PERPQ96FX8 193 aa5.95□□□□□ -1.46
COL17A1-204ENST00000433822 IGF2BP2-AS1Q96M15 143 aa5.95□□□□□ -1.46
COL17A1-204ENST00000433822 GNB1LQ9BYB4 327 aa5.95□□□□□ -1.46
COL17A1-204ENST00000433822 PRDM13Q9H4Q3 707 aa5.95□□□□□ -1.46
COL17A1-204ENST00000433822 FNDC4Q9H6D8 234 aaPredicted RBP5.95□□□□□ -1.46
COL17A1-204ENST00000433822 SIGLEC9Q9Y336 463 aa5.95□□□□□ -1.46
COL17A1-204ENST00000433822 TRAPPC1Q9Y5R8 145 aa5.95□□□□□ -1.46
COL17A1-204ENST00000433822 V9GYV3 84 aa5.95□□□□□ -1.46
COL17A1-204ENST00000433822 POLEQ07864 2286 aa5.94□□□□□ -1.46
COL17A1-204ENST00000433822 IGHV1-3A0A0C4DH29 117 aa5.94□□□□□ -1.46
COL17A1-204ENST00000433822 TRBV6-1A0A0K0K1D8 114 aa5.94□□□□□ -1.46
COL17A1-204ENST00000433822 A1L4Q6 167 aa5.94□□□□□ -1.46
COL17A1-204ENST00000433822 OOSP1A8MZH6 123 aa5.94□□□□□ -1.46
COL17A1-204ENST00000433822 GGTLC3B5MD39 225 aa5.94□□□□□ -1.46
COL17A1-204ENST00000433822 TSTD3H0UI37 97 aa5.94□□□□□ -1.46
COL17A1-204ENST00000433822 K7EN84 100 aa5.94□□□□□ -1.46
COL17A1-204ENST00000433822 SLC25A17O43808 307 aa5.94□□□□□ -1.46
COL17A1-204ENST00000433822 FOXH1O75593 365 aa5.94□□□□□ -1.46
COL17A1-204ENST00000433822 IGLV2-8P01709 118 aa5.94□□□□□ -1.46
COL17A1-204ENST00000433822 LIPFP07098 398 aa5.94□□□□□ -1.46
COL17A1-204ENST00000433822 FABP4P15090 132 aa5.94□□□□□ -1.46
COL17A1-204ENST00000433822 MYOD1P15172 320 aa5.94□□□□□ -1.46
COL17A1-204ENST00000433822 MYCNOSP40205 109 aa5.94□□□□□ -1.46
COL17A1-204ENST00000433822 CX3CL1P78423 397 aa5.94□□□□□ -1.46
COL17A1-204ENST00000433822 Q0VG73 95 aa5.94□□□□□ -1.46
COL17A1-204ENST00000433822 CENPWQ5EE01 88 aa5.94□□□□□ -1.46
COL17A1-204ENST00000433822 GFI1BQ5VTD9 330 aa5.94□□□□□ -1.46
COL17A1-204ENST00000433822 C10orf113Q5VZT2 155 aa5.94□□□□□ -1.46
COL17A1-204ENST00000433822 CYB5R2Q6BCY4 276 aa5.94□□□□□ -1.46
COL17A1-204ENST00000433822 PPP1R27Q86WC6 154 aa5.94□□□□□ -1.46
COL17A1-204ENST00000433822 KIR3DL3Q8N743 410 aa5.94□□□□□ -1.46
COL17A1-204ENST00000433822 OR11H6Q8NGC7 330 aa5.94□□□□□ -1.46
COL17A1-204ENST00000433822 OR10W1Q8NGF6 305 aa5.94□□□□□ -1.46
COL17A1-204ENST00000433822 OR8B3Q8NGG8 313 aa5.94□□□□□ -1.46
COL17A1-204ENST00000433822 WIPF2Q8TF74 440 aaPredicted RBP5.94□□□□□ -1.46
COL17A1-204ENST00000433822 ZNF48Q96MX3 618 aaPredicted RBP5.94□□□□□ -1.46
COL17A1-204ENST00000433822 OR8B2Q96RD0 313 aa5.94□□□□□ -1.46
COL17A1-204ENST00000433822 SPATA25Q9BR10 227 aa5.94□□□□□ -1.46
COL17A1-204ENST00000433822 SLC25A2Q9BXI2 301 aa5.94□□□□□ -1.46
COL17A1-204ENST00000433822 RAB1BQ9H0U4 201 aa5.94□□□□□ -1.46
COL17A1-204ENST00000433822 ZNF355PQ9NSJ1 428 aa5.94□□□□□ -1.46
COL17A1-204ENST00000433822 ZNRD1Q9P1U0 126 aa5.94□□□□□ -1.46
COL17A1-204ENST00000433822 RNF24Q9Y225 148 aa5.94□□□□□ -1.46
COL17A1-204ENST00000433822 KLF12Q9Y4X4 402 aa5.94□□□□□ -1.46
COL17A1-204ENST00000433822 F11RQ9Y624 299 aaKnown RBP5.94□□□□□ -1.46
COL17A1-204ENST00000433822 TACC2O95359 2948 aa5.94□□□□□ -1.46
COL17A1-204ENST00000433822 SMIM27A0A1W2PRY6 76 aa5.93□□□□□ -1.46
COL17A1-204ENST00000433822 E7EUB6 86 aa5.93□□□□□ -1.46
COL17A1-204ENST00000433822 ACTL6BO94805 426 aa5.93□□□□□ -1.46
COL17A1-204ENST00000433822 NDUFA3O95167 84 aa5.93□□□□□ -1.46
COL17A1-204ENST00000433822 HLA-DQA1P01909 254 aa5.93□□□□□ -1.46
COL17A1-204ENST00000433822 CRYBB3P26998 211 aa5.93□□□□□ -1.46
COL17A1-204ENST00000433822 CEACAM3P40198 252 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms