RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 KIR3DS1Q14943 382 aa9.35□□□□□ -0.91
HMGCS1-202ENST00000433297 Q5PR19 223 aa9.35□□□□□ -0.91
HMGCS1-202ENST00000433297 FA2HQ7L5A8 372 aa9.35□□□□□ -0.91
HMGCS1-202ENST00000433297 SP9P0CG40 484 aa9.34□□□□□ -0.91
HMGCS1-202ENST00000433297 SAA1P0DJI8 122 aaPredicted RBP9.34□□□□□ -0.91
HMGCS1-202ENST00000433297 C10orf55Q5SWW7 151 aa9.34□□□□□ -0.91
HMGCS1-202ENST00000433297 RBPMS2Q6ZRY4 209 aaKnown RBP9.34□□□□□ -0.91
HMGCS1-202ENST00000433297 MOGAT3Q86VF5 341 aa9.34□□□□□ -0.91
HMGCS1-202ENST00000433297 CIARTQ8N365 385 aaPredicted RBP9.34□□□□□ -0.91
HMGCS1-202ENST00000433297 FXYD5Q96DB9 178 aa9.34□□□□□ -0.91
HMGCS1-202ENST00000433297 PERPQ96FX8 193 aa9.34□□□□□ -0.91
HMGCS1-202ENST00000433297 C9orf118A6NHY6 69 aa9.34□□□□□ -0.91
HMGCS1-202ENST00000433297 E7EUB6 86 aa9.34□□□□□ -0.91
HMGCS1-202ENST00000433297 NBEAP1P0C6P0 100 aa9.34□□□□□ -0.91
HMGCS1-202ENST00000433297 NMUP48645 174 aa9.34□□□□□ -0.91
HMGCS1-202ENST00000433297 SEC11AP67812 179 aa9.34□□□□□ -0.91
HMGCS1-202ENST00000433297 C2orf83Q53S99 150 aa9.34□□□□□ -0.91
HMGCS1-202ENST00000433297 SPRNQ5BIV9 151 aa9.34□□□□□ -0.91
HMGCS1-202ENST00000433297 OR1L4Q8NGR5 311 aa9.34□□□□□ -0.91
HMGCS1-202ENST00000433297 OR4A5Q8NH83 315 aa9.34□□□□□ -0.91
HMGCS1-202ENST00000433297 SPCS1Q9Y6A9 102 aa9.34□□□□□ -0.91
HMGCS1-202ENST00000433297 SERTM2A0A1B0GWG4 89 aa9.33□□□□□ -0.92
HMGCS1-202ENST00000433297 SPRY3O43610 288 aa9.33□□□□□ -0.92
HMGCS1-202ENST00000433297 GTSF1LQ9H1H1 148 aa9.33□□□□□ -0.92
HMGCS1-202ENST00000433297 hADV38S2A0JD32 116 aa9.33□□□□□ -0.92
HMGCS1-202ENST00000433297 MEF2CQ06413 473 aaPredicted RBP9.33□□□□□ -0.92
HMGCS1-202ENST00000433297 SAMD13Q5VXD3 122 aa9.33□□□□□ -0.92
HMGCS1-202ENST00000433297 PRNTQ86SH4 94 aa9.33□□□□□ -0.92
HMGCS1-202ENST00000433297 ADTRPQ96IZ2 230 aa9.33□□□□□ -0.92
HMGCS1-202ENST00000433297 C1RLQ9NZP8 487 aa9.33□□□□□ -0.92
HMGCS1-202ENST00000433297 DCHS1Q96JQ0 3298 aa9.33□□□□□ -0.92
HMGCS1-202ENST00000433297 FNDC10F2Z333 226 aa9.33□□□□□ -0.92
HMGCS1-202ENST00000433297 FAM106CPP0CH98 169 aa9.33□□□□□ -0.92
HMGCS1-202ENST00000433297 FAM106AQ4KMX7 169 aa9.33□□□□□ -0.92
HMGCS1-202ENST00000433297 PEAR1Q5VY43 1037 aaPredicted RBP9.33□□□□□ -0.92
HMGCS1-202ENST00000433297 WFDC3Q8IUB2 231 aa9.33□□□□□ -0.92
HMGCS1-202ENST00000433297 NEU4Q8WWR8 484 aaPredicted RBP9.33□□□□□ -0.92
HMGCS1-202ENST00000433297 JKAMPQ9P055 326 aa9.33□□□□□ -0.92
HMGCS1-202ENST00000433297 CHTOPQ9Y3Y2 248 aaKnown RBP9.33□□□□□ -0.92
HMGCS1-202ENST00000433297 MED13Q9UHV7 2174 aa9.33□□□□□ -0.92
HMGCS1-202ENST00000433297 J3QW42 95 aa9.32□□□□□ -0.92
HMGCS1-202ENST00000433297 DLL1O00548 723 aa9.32□□□□□ -0.92
HMGCS1-202ENST00000433297 SMAGPQ0VAQ4 97 aa9.32□□□□□ -0.92
HMGCS1-202ENST00000433297 C17orf58Q2M2W7 97 aa9.32□□□□□ -0.92
HMGCS1-202ENST00000433297 Q71RC1 249 aaPredicted RBP9.32□□□□□ -0.92
HMGCS1-202ENST00000433297 GCSAMQ8N6F7 178 aa9.32□□□□□ -0.92
HMGCS1-202ENST00000433297 HARBI1Q96MB7 349 aa9.32□□□□□ -0.92
HMGCS1-202ENST00000433297 C7orf69Q9H7B7 122 aa9.32□□□□□ -0.92
HMGCS1-202ENST00000433297 PTPRBP23467 1997 aa9.32□□□□□ -0.92
HMGCS1-202ENST00000433297 K7EP34 96 aa9.32□□□□□ -0.92
HMGCS1-202ENST00000433297 F2RL2O00254 374 aa9.32□□□□□ -0.92
HMGCS1-202ENST00000433297 ZNF207O43670 478 aaKnown RBP9.32□□□□□ -0.92
HMGCS1-202ENST00000433297 CT45A6P0DMU7 189 aa9.32□□□□□ -0.92
HMGCS1-202ENST00000433297 CT45A5P0DMU8 189 aa9.32□□□□□ -0.92
HMGCS1-202ENST00000433297 CT45A7P0DMV0 189 aa9.32□□□□□ -0.92
HMGCS1-202ENST00000433297 CSN1S1P47710 185 aa9.32□□□□□ -0.92
HMGCS1-202ENST00000433297 LINC01545Q5VT33 79 aa9.32□□□□□ -0.92
HMGCS1-202ENST00000433297 VWA1Q6PCB0 445 aa9.32□□□□□ -0.92
HMGCS1-202ENST00000433297 TMEM105Q8N8V8 129 aa9.32□□□□□ -0.92
HMGCS1-202ENST00000433297 ZNF576Q9H609 170 aa9.32□□□□□ -0.92
HMGCS1-202ENST00000433297 MRPL36Q9P0J6 103 aaKnown RBP9.32□□□□□ -0.92
HMGCS1-202ENST00000433297 PLXNB1O43157 2135 aa9.32□□□□□ -0.92
HMGCS1-202ENST00000433297 TRGV5A0A0B4J1U4 118 aa9.32□□□□□ -0.92
HMGCS1-202ENST00000433297 PSMB11A5LHX3 300 aa9.32□□□□□ -0.92
HMGCS1-202ENST00000433297 K7ESF4 209 aa9.32□□□□□ -0.92
HMGCS1-202ENST00000433297 CECR9P0C854 216 aa9.32□□□□□ -0.92
HMGCS1-202ENST00000433297 UFSP1Q6NVU6 142 aa9.32□□□□□ -0.92
HMGCS1-202ENST00000433297 SRSF12Q8WXF0 261 aaKnown RBP9.32□□□□□ -0.92
HMGCS1-202ENST00000433297 GUCD1Q96NT3 240 aa9.32□□□□□ -0.92
HMGCS1-202ENST00000433297 NDFIP1Q9BT67 221 aa9.32□□□□□ -0.92
HMGCS1-202ENST00000433297 ZNF747Q9BV97 191 aa9.32□□□□□ -0.92
HMGCS1-202ENST00000433297 SPRR3Q9UBC9 169 aa9.32□□□□□ -0.92
HMGCS1-202ENST00000433297 SSUH2Q9Y2M2 353 aa9.32□□□□□ -0.92
HMGCS1-202ENST00000433297 H3BRM9 83 aa9.31□□□□□ -0.92
HMGCS1-202ENST00000433297 FAM87AP0C7U9 286 aa9.31□□□□□ -0.92
HMGCS1-202ENST00000433297 HCP5Q6MZN7 132 aa9.31□□□□□ -0.92
HMGCS1-202ENST00000433297 INO80CQ6PI98 192 aaPredicted RBP9.31□□□□□ -0.92
HMGCS1-202ENST00000433297 ITLN1Q8WWA0 313 aa9.31□□□□□ -0.92
HMGCS1-202ENST00000433297 NAV3Q8IVL0 2385 aa9.31□□□□□ -0.92
HMGCS1-202ENST00000433297 KBTBD11-OT1A0A1B0GTJ5 212 aa9.31□□□□□ -0.92
HMGCS1-202ENST00000433297 A1L4Q6 167 aa9.31□□□□□ -0.92
HMGCS1-202ENST00000433297 NTN3O00634 580 aaPredicted RBP9.31□□□□□ -0.92
HMGCS1-202ENST00000433297 CACNG7P62955 275 aa9.31□□□□□ -0.92
HMGCS1-202ENST00000433297 OR1L8Q8NGR8 309 aa9.31□□□□□ -0.92
HMGCS1-202ENST00000433297 KLRC4-KLRK1H3BQV0 150 aa9.3□□□□□ -0.92
HMGCS1-202ENST00000433297 ARMS2P0C7Q2 107 aa9.3□□□□□ -0.92
HMGCS1-202ENST00000433297 IFI27P40305 119 aaPredicted RBP9.3□□□□□ -0.92
HMGCS1-202ENST00000433297 VSTM2AQ8TAG5 236 aa9.3□□□□□ -0.92
HMGCS1-202ENST00000433297 TANC2Q9HCD6 1990 aa9.3□□□□□ -0.92
HMGCS1-202ENST00000433297 TCRBV4S1A1TA0A5B7 111 aa9.3□□□□□ -0.92
HMGCS1-202ENST00000433297 SRRM5B3KS81 715 aa9.3□□□□□ -0.92
HMGCS1-202ENST00000433297 LOXL1Q08397 574 aaPredicted RBP9.3□□□□□ -0.92
HMGCS1-202ENST00000433297 RNFT1Q5M7Z0 435 aa9.3□□□□□ -0.92
HMGCS1-202ENST00000433297 ZNF714Q96N38 554 aa9.3□□□□□ -0.92
HMGCS1-202ENST00000433297 GOLT1AQ6ZVE7 132 aa9.3□□□□□ -0.92
HMGCS1-202ENST00000433297 CACNG8Q8WXS5 425 aa9.3□□□□□ -0.92
HMGCS1-202ENST00000433297 Q9H3A6 140 aa9.3□□□□□ -0.92
HMGCS1-202ENST00000433297 TMSB15BA0A087X1C1 80 aa9.29□□□□□ -0.92
HMGCS1-202ENST00000433297 GCSHP23434 173 aa9.29□□□□□ -0.92
HMGCS1-202ENST00000433297 RBPJQ06330 500 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms