RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 FAM90A26D6RGX4 464 aa4.32□□□□□ -1.72
HMGB3P24-201ENST00000433260 NPIPB6E9PJ23 425 aa4.32□□□□□ -1.72
HMGB3P24-201ENST00000433260 SSSCA1O60232 199 aa4.32□□□□□ -1.72
HMGB3P24-201ENST00000433260 SCGB2A1O75556 95 aa4.32□□□□□ -1.72
HMGB3P24-201ENST00000433260 CCNKO75909 580 aa4.32□□□□□ -1.72
HMGB3P24-201ENST00000433260 DFFBO76075 338 aa4.32□□□□□ -1.72
HMGB3P24-201ENST00000433260 SIX6O95475 246 aa4.32□□□□□ -1.72
HMGB3P24-201ENST00000433260 IGLC1P0CG04 106 aa4.32□□□□□ -1.72
HMGB3P24-201ENST00000433260 PSG1P11464 419 aa4.32□□□□□ -1.72
HMGB3P24-201ENST00000433260 OR10J1P30954 320 aa4.32□□□□□ -1.72
HMGB3P24-201ENST00000433260 GPX4P36969 197 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P24-201ENST00000433260 LINC00310P59036 64 aa4.32□□□□□ -1.72
HMGB3P24-201ENST00000433260 ZNF90Q03938 601 aa4.32□□□□□ -1.72
HMGB3P24-201ENST00000433260 OR2F1Q13607 317 aa4.32□□□□□ -1.72
HMGB3P24-201ENST00000433260 OR8G2PQ6IF36 304 aa4.32□□□□□ -1.72
HMGB3P24-201ENST00000433260 GSG1LQ6UXU4 331 aa4.32□□□□□ -1.72
HMGB3P24-201ENST00000433260 SLC16A13Q7RTY0 426 aa4.32□□□□□ -1.72
HMGB3P24-201ENST00000433260 ZBTB8BQ8NAP8 495 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P24-201ENST00000433260 OR4D5Q8NGN0 318 aa4.32□□□□□ -1.72
HMGB3P24-201ENST00000433260 OR1S2Q8NGQ3 325 aa4.32□□□□□ -1.72
HMGB3P24-201ENST00000433260 ST8SIA2Q92186 375 aa4.32□□□□□ -1.72
HMGB3P24-201ENST00000433260 SLC35E1Q96K37 410 aa4.32□□□□□ -1.72
HMGB3P24-201ENST00000433260 FAM210AQ96ND0 272 aa4.32□□□□□ -1.72
HMGB3P24-201ENST00000433260 GINS3Q9BRX5 216 aa4.32□□□□□ -1.72
HMGB3P24-201ENST00000433260 KRTAP4-6Q9BYQ5 205 aa4.32□□□□□ -1.72
HMGB3P24-201ENST00000433260 RCL1Q9Y2P8 373 aaKnown RBP4.32□□□□□ -1.72
HMGB3P24-201ENST00000433260 STRAPQ9Y3F4 350 aaKnown RBP4.32□□□□□ -1.72
HMGB3P24-201ENST00000433260 LSM5Q9Y4Y9 91 aaKnown RBP4.32□□□□□ -1.72
HMGB3P24-201ENST00000433260 MGAM2Q2M2H8 2515 aa4.32□□□□□ -1.72
HMGB3P24-201ENST00000433260 SORL1Q92673 2214 aa4.31□□□□□ -1.72
HMGB3P24-201ENST00000433260 TRAV25A0A0B4J276 109 aa4.31□□□□□ -1.72
HMGB3P24-201ENST00000433260 SMCO3A2RU48 225 aa4.31□□□□□ -1.72
HMGB3P24-201ENST00000433260 INMT-MINDY4F8WBC2 141 aa4.31□□□□□ -1.72
HMGB3P24-201ENST00000433260 L7N2F9 121 aa4.31□□□□□ -1.72
HMGB3P24-201ENST00000433260 DNASE2O00115 360 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P24-201ENST00000433260 IGKV1-17P01599 117 aa4.31□□□□□ -1.72
HMGB3P24-201ENST00000433260 IL4P05112 153 aa4.31□□□□□ -1.72
HMGB3P24-201ENST00000433260 METTL15P1P0C7V9 234 aa4.31□□□□□ -1.72
HMGB3P24-201ENST00000433260 NHLRC4P0CG21 123 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P24-201ENST00000433260 RD3LP0DJH9 198 aa4.31□□□□□ -1.72
HMGB3P24-201ENST00000433260 GATA2P23769 480 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P24-201ENST00000433260 BCAP31P51572 246 aa4.31□□□□□ -1.72
HMGB3P24-201ENST00000433260 PAX9P55771 341 aa4.31□□□□□ -1.72
HMGB3P24-201ENST00000433260 ATP5IP56385 69 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P24-201ENST00000433260 DEFA1P59665 94 aa4.31□□□□□ -1.72
HMGB3P24-201ENST00000433260 DEFA3P59666 94 aa4.31□□□□□ -1.72
HMGB3P24-201ENST00000433260 YPEL3P61236 119 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P24-201ENST00000433260 RRAS2P62070 204 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P24-201ENST00000433260 VAMP2P63027 116 aa4.31□□□□□ -1.72
HMGB3P24-201ENST00000433260 ZNF124Q15973 351 aa4.31□□□□□ -1.72
HMGB3P24-201ENST00000433260 HAGHQ16775 308 aa4.31□□□□□ -1.72
HMGB3P24-201ENST00000433260 TCF24Q7RTU0 167 aa4.31□□□□□ -1.72
HMGB3P24-201ENST00000433260 APRG1Q8IVJ8 170 aa4.31□□□□□ -1.72
HMGB3P24-201ENST00000433260 OR51G1Q8NGK1 321 aa4.31□□□□□ -1.72
HMGB3P24-201ENST00000433260 SMIM8Q96KF7 97 aa4.31□□□□□ -1.72
HMGB3P24-201ENST00000433260 C16orf92Q96LL3 132 aa4.31□□□□□ -1.72
HMGB3P24-201ENST00000433260 CIB3Q96Q77 187 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P24-201ENST00000433260 METTL26Q96S19 204 aa4.31□□□□□ -1.72
HMGB3P24-201ENST00000433260 PBDC1Q9BVG4 233 aa4.31□□□□□ -1.72
HMGB3P24-201ENST00000433260 SRD5A3Q9H8P0 318 aa4.31□□□□□ -1.72
HMGB3P24-201ENST00000433260 GPN1Q9HCN4 374 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P24-201ENST00000433260 RABAC1Q9UI14 185 aa4.31□□□□□ -1.72
HMGB3P24-201ENST00000433260 IGKV1D-37A0A075B6S9 117 aa4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 A0A1W2PS18 150 aa4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 C7orf66A4D0T2 115 aa4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 RBMY1BA6NDE4 496 aaKnown RBP4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 RBMY1EA6NEQ0 496 aaKnown RBP4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 FAM24AA6NFZ4 105 aa4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 OR4C46A6NHA9 309 aa4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 PMS2P5A8MQ11 134 aa4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 SNRPGP15A8MWD9 76 aa4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 A8MZ25 164 aa4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 GOSR2O14653 212 aa4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 TSPAN4O14817 238 aa4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 TOMM40O96008 361 aa4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 MBPP02686 304 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 IL5P05113 134 aa4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 RBMY1DP0C7P1 496 aaKnown RBP4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 RPL35AP18077 110 aaKnown RBP4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 P2RY1P47900 373 aa4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 S100A10P60903 97 aa4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 PAFAH1B2P68402 229 aa4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 AKR1C1Q04828 323 aa4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 USF2Q15853 346 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 FAM90A2PQ658T7 463 aa4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 TMEM182Q6ZP80 229 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 STPG3Q8N7X2 389 aa4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 STXBP6Q8NFX7 210 aa4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 PPP1R14BQ96C90 147 aa4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 GRAMD2BQ96HH9 432 aa4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 NARS2Q96I59 477 aaKnown RBP4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 C2orf50Q96LR7 162 aa4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 SPAG8Q99932 426 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 MS4A6AQ9H2W1 248 aa4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 VSIRQ9H7M9 311 aa4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 ZMAT4Q9H898 229 aa4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 RETNQ9HD89 108 aa4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 U3KQK5 164 aa4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 CMYA5Q8N3K9 4069 aa4.3□□□□□ -1.72
HMGB3P24-201ENST00000433260 IGKV1OR2-108A0A075B7D4 117 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms