RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 CLLU1Q5K131 121 aa1.69□□□□□ -2.14
CLK1-204ENST00000432425 SSX8Q7RTT4 187 aa1.69□□□□□ -2.14
CLK1-204ENST00000432425 ZNF720Q7Z2F6 126 aa1.69□□□□□ -2.14
CLK1-204ENST00000432425 TRAPPC6BQ86SZ2 158 aa1.69□□□□□ -2.14
CLK1-204ENST00000432425 LRP11Q86VZ4 500 aa1.69□□□□□ -2.14
CLK1-204ENST00000432425 RPP25LQ8N5L8 163 aaKnown RBP1.69□□□□□ -2.14
CLK1-204ENST00000432425 OR5C1Q8NGR4 320 aa1.69□□□□□ -2.14
CLK1-204ENST00000432425 RAB2BQ8WUD1 216 aa1.69□□□□□ -2.14
CLK1-204ENST00000432425 CIB3Q96Q77 187 aaPredicted RBP1.69□□□□□ -2.14
CLK1-204ENST00000432425 OR2A5Q96R48 311 aa1.69□□□□□ -2.14
CLK1-204ENST00000432425 CCL13Q99616 98 aa1.69□□□□□ -2.14
CLK1-204ENST00000432425 BANF2Q9H503 90 aa1.69□□□□□ -2.14
CLK1-204ENST00000432425 FUT9Q9Y231 359 aa1.69□□□□□ -2.14
CLK1-204ENST00000432425 FIS1Q9Y3D6 152 aa1.69□□□□□ -2.14
CLK1-204ENST00000432425 TROQ12816 1431 aaPredicted RBP1.69□□□□□ -2.14
CLK1-204ENST00000432425 FMN1Q68DA7 1419 aa1.69□□□□□ -2.14
CLK1-204ENST00000432425 RRBP1Q9P2E9 1410 aaKnown RBP1.69□□□□□ -2.14
CLK1-204ENST00000432425 TRAPPC8Q9Y2L5 1435 aa1.69□□□□□ -2.14
CLK1-204ENST00000432425 KTN1Q86UP2 1357 aaKnown RBP1.69□□□□□ -2.14
CLK1-204ENST00000432425 SCN9AQ15858 1988 aa1.69□□□□□ -2.14
CLK1-204ENST00000432425 DSPPQ9NZW4 1301 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 A2ML1A8K2U0 1454 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 CAMSAP2Q08AD1 1489 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 NEO1Q92859 1461 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 TRBV20OR9-2A0A075B6H5 130 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 TRAV9-1A0A075B6T8 112 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 IGHV1-69-2A0A0G2JMI3 117 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 IZUMO1RA6ND01 250 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 TAX1BP3O14907 124 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 OBSL1O75147 1896 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 NAPSAO96009 420 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 CXCL1P09341 107 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 LINC00869P0C866 280 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 FABP2P12104 132 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 IL7P13232 177 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 CRYBB3P26998 211 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 IMPA1P29218 277 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 SDC2P34741 201 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 OPRM1P35372 400 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 ZNF80P51504 273 aaPredicted RBP1.68□□□□□ -2.14
CLK1-204ENST00000432425 AKR1C2P52895 323 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 SYNJ2BPP57105 145 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 CRADDP78560 199 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 LINC00303Q3SY05 128 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 COA6Q5JTJ3 125 aaKnown RBP1.68□□□□□ -2.14
CLK1-204ENST00000432425 MRPL2Q5T653 305 aaKnown RBP1.68□□□□□ -2.14
CLK1-204ENST00000432425 C1orf140Q5VVS0 124 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 ZNF880Q6PDB4 577 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 ZNF705AQ6ZN79 300 aaPredicted RBP1.68□□□□□ -2.14
CLK1-204ENST00000432425 NRKQ7Z2Y5 1582 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 OR4K13Q8NH42 304 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 OR51H1Q8NH63 302 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 STAG3L4Q8TBR4 150 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 RNASE6Q93091 150 aaKnown RBP1.68□□□□□ -2.14
CLK1-204ENST00000432425 GINS4Q9BRT9 223 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.68□□□□□ -2.14
CLK1-204ENST00000432425 PARP12Q9H0J9 701 aaKnown RBP1.68□□□□□ -2.14
CLK1-204ENST00000432425 PLEKHF2Q9H8W4 249 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 MED9Q9NWA0 146 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 TAAR3PQ9P1P4 343 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 LAMTOR3Q9UHA4 124 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 PLXNB1O43157 2135 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 SCN8AQ9UQD0 1980 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 CC2D2AQ9P2K1 1620 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 MICAL3Q7RTP6 2002 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 DOCK1Q14185 1865 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 NAIPQ13075 1403 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 UACAQ9BZF9 1416 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 ATAD5Q96QE3 1844 aa1.68□□□□□ -2.14
CLK1-204ENST00000432425 TRAV27A0A087WT01 109 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 A0A1W2PRS3 328 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 C7orf66A4D0T2 115 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 TLCD2A6NGC4 264 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 ZNF860A6NHJ4 632 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 ZNF727A8MUV8 499 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 IGLL5B9A064 214 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 RPL36A-HNRNPH2H7BZ11 118 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 M0R378 163 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 PLA2G10O15496 165 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 KLF7O75840 302 aaPredicted RBP1.67□□□□□ -2.14
CLK1-204ENST00000432425 TCRAP04437 139 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 IGKV4-1P06312 121 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 SCGB1C2P0DMR2 95 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 ZNF93P35789 620 aaPredicted RBP1.67□□□□□ -2.14
CLK1-204ENST00000432425 TGFBR1P36897 503 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 TMBIM6P55061 237 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 HOXC5Q00444 222 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 PLGLB1Q02325 96 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 SPANXN3Q5MJ09 141 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 LYPD2Q6UXB3 125 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 FOXI2Q6ZQN5 318 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 LINC00305Q7Z4B0 112 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 RPS19BP1Q86WX3 136 aaKnown RBP1.67□□□□□ -2.14
CLK1-204ENST00000432425 TTC9CQ8N5M4 171 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 LINC00311Q8N616 119 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 OR8D4Q8NGM9 314 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 SCGB1C1Q8TD33 95 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 DPH3Q96FX2 82 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 ABHD14BQ96IU4 210 aa1.67□□□□□ -2.14
CLK1-204ENST00000432425 YPEL4Q96NS1 127 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms