RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 C10orf113Q5VZT2 155 aa13.17□□□□□ -0.3
USHBP1-203ENST00000431146 FAM24BQ8N5W8 94 aa13.17□□□□□ -0.3
USHBP1-203ENST00000431146 HSPB9Q9BQS6 159 aa13.17□□□□□ -0.3
USHBP1-203ENST00000431146 KMT2BQ9UMN6 2715 aaPredicted RBP13.17□□□□□ -0.3
USHBP1-203ENST00000431146 IGHV7-81A0A0B4J1V7 117 aa13.16□□□□□ -0.3
USHBP1-203ENST00000431146 SCO2A0A1W2PP80 73 aa13.16□□□□□ -0.3
USHBP1-203ENST00000431146 K7EIM0 57 aa13.16□□□□□ -0.3
USHBP1-203ENST00000431146 OR2C1O95371 312 aa13.16□□□□□ -0.3
USHBP1-203ENST00000431146 MAPK1IP1LQ8NDC0 245 aa13.16□□□□□ -0.3
USHBP1-203ENST00000431146 OR1B1Q8NGR6 318 aa13.16□□□□□ -0.3
USHBP1-203ENST00000431146 TRGV9Q99603 122 aa13.16□□□□□ -0.3
USHBP1-203ENST00000431146 C19orf24Q9BVV8 132 aa13.16□□□□□ -0.3
USHBP1-203ENST00000431146 SLC25A2Q9BXI2 301 aa13.16□□□□□ -0.3
USHBP1-203ENST00000431146 C7orf69Q9H7B7 122 aa13.16□□□□□ -0.3
USHBP1-203ENST00000431146 DOPEY2Q9Y3R5 2298 aa13.16□□□□□ -0.3
USHBP1-203ENST00000431146 PDE6DO43924 150 aa13.16□□□□□ -0.3
USHBP1-203ENST00000431146 SNRPCP09234 159 aaKnown RBP13.16□□□□□ -0.3
USHBP1-203ENST00000431146 LINC00614P0C842 121 aa13.16□□□□□ -0.3
USHBP1-203ENST00000431146 C8orf88P0DMB2 117 aa13.16□□□□□ -0.3
USHBP1-203ENST00000431146 G0S2P27469 103 aa13.16□□□□□ -0.3
USHBP1-203ENST00000431146 DDTP30046 118 aa13.16□□□□□ -0.3
USHBP1-203ENST00000431146 SELENOTP62341 195 aa13.16□□□□□ -0.3
USHBP1-203ENST00000431146 TMEM241Q24JQ0 296 aa13.16□□□□□ -0.3
USHBP1-203ENST00000431146 TMEM219Q86XT9 240 aa13.16□□□□□ -0.3
USHBP1-203ENST00000431146 OR5T1Q8NG75 326 aa13.16□□□□□ -0.3
USHBP1-203ENST00000431146 HIST1H2BAQ96A08 127 aa13.16□□□□□ -0.3
USHBP1-203ENST00000431146 ZNF355PQ9NSJ1 428 aa13.16□□□□□ -0.3
USHBP1-203ENST00000431146 NAT8Q9UHE5 227 aa13.16□□□□□ -0.3
USHBP1-203ENST00000431146 CSPG4Q6UVK1 2322 aa13.15□□□□□ -0.3
USHBP1-203ENST00000431146 A0A0U1RQK1 487 aa13.15□□□□□ -0.3
USHBP1-203ENST00000431146 EGR2P11161 476 aaPredicted RBP13.15□□□□□ -0.3
USHBP1-203ENST00000431146 PKIAP61925 76 aa13.15□□□□□ -0.3
USHBP1-203ENST00000431146 ZNF343Q6P1L6 599 aa13.15□□□□□ -0.3
USHBP1-203ENST00000431146 C15orf54Q8N8G6 183 aa13.15□□□□□ -0.3
USHBP1-203ENST00000431146 OR5AU1Q8NGC0 362 aa13.15□□□□□ -0.3
USHBP1-203ENST00000431146 FAM167A-AS1Q96KT0 104 aa13.15□□□□□ -0.3
USHBP1-203ENST00000431146 HIF1ANQ9NWT6 349 aa13.15□□□□□ -0.3
USHBP1-203ENST00000431146 URGCP-MRPS24S4R325 110 aa13.15□□□□□ -0.3
USHBP1-203ENST00000431146 IGLC1P0CG04 106 aa13.15□□□□□ -0.3
USHBP1-203ENST00000431146 RD3LP0DJH9 198 aa13.15□□□□□ -0.3
USHBP1-203ENST00000431146 PYYP10082 97 aa13.15□□□□□ -0.3
USHBP1-203ENST00000431146 TAS2R45P59539 299 aa13.15□□□□□ -0.3
USHBP1-203ENST00000431146 PNRC1Q12796 327 aaPredicted RBP13.15□□□□□ -0.3
USHBP1-203ENST00000431146 TIGITQ495A1 244 aa13.15□□□□□ -0.3
USHBP1-203ENST00000431146 LINC00305Q7Z4B0 112 aa13.15□□□□□ -0.3
USHBP1-203ENST00000431146 OR1L4Q8NGR5 311 aa13.15□□□□□ -0.3
USHBP1-203ENST00000431146 FANCD2OSQ96PS1 177 aa13.15□□□□□ -0.3
USHBP1-203ENST00000431146 RASL11BQ9BPW5 248 aa13.15□□□□□ -0.3
USHBP1-203ENST00000431146 PRDM13Q9H4Q3 707 aa13.15□□□□□ -0.3
USHBP1-203ENST00000431146 AURKAIP1Q9NWT8 199 aaPredicted RBP13.15□□□□□ -0.3
USHBP1-203ENST00000431146 C1RLQ9NZP8 487 aa13.15□□□□□ -0.3
USHBP1-203ENST00000431146 NAV2Q8IVL1 2488 aa13.14□□□□□ -0.31
USHBP1-203ENST00000431146 APCP25054 2843 aa13.14□□□□□ -0.31
USHBP1-203ENST00000431146 RPL23P62829 140 aaKnown RBP13.14□□□□□ -0.31
USHBP1-203ENST00000431146 PQLC2Q6ZP29 291 aa13.14□□□□□ -0.31
USHBP1-203ENST00000431146 MRPL32Q9BYC8 188 aaKnown RBP13.14□□□□□ -0.31
USHBP1-203ENST00000431146 TUBA4BQ9H853 241 aa13.14□□□□□ -0.31
USHBP1-203ENST00000431146 A0A087WWC5 75 aa13.13□□□□□ -0.31
USHBP1-203ENST00000431146 PGPEP1LA6NFU8 196 aa13.13□□□□□ -0.31
USHBP1-203ENST00000431146 AVPP01185 164 aa13.13□□□□□ -0.31
USHBP1-203ENST00000431146 HIST1H1BP16401 226 aaKnown RBP13.13□□□□□ -0.31
USHBP1-203ENST00000431146 LINC01548A6NM66 108 aa13.13□□□□□ -0.31
USHBP1-203ENST00000431146 NPIPB5A8MRT5 1133 aa13.13□□□□□ -0.31
USHBP1-203ENST00000431146 PSG1P11464 419 aa13.13□□□□□ -0.31
USHBP1-203ENST00000431146 DSCR9P59020 149 aa13.13□□□□□ -0.31
USHBP1-203ENST00000431146 GAGE1Q13065 139 aa13.13□□□□□ -0.31
USHBP1-203ENST00000431146 TMEM167BQ9NRX6 74 aa13.13□□□□□ -0.31
USHBP1-203ENST00000431146 IGLV11-55A0A075B6I3 123 aa13.12□□□□□ -0.31
USHBP1-203ENST00000431146 B4DSR2 109 aa13.12□□□□□ -0.31
USHBP1-203ENST00000431146 F6UZH7 168 aa13.12□□□□□ -0.31
USHBP1-203ENST00000431146 TSTD3H0UI37 97 aa13.12□□□□□ -0.31
USHBP1-203ENST00000431146 IGKV1-17P01599 117 aa13.12□□□□□ -0.31
USHBP1-203ENST00000431146 IGHV3-23P01764 117 aa13.12□□□□□ -0.31
USHBP1-203ENST00000431146 HLA-DRB1P01911 266 aa13.12□□□□□ -0.31
USHBP1-203ENST00000431146 UBE2L3P68036 154 aaKnown RBP13.12□□□□□ -0.31
USHBP1-203ENST00000431146 ECSCRQ19T08 205 aa13.12□□□□□ -0.31
USHBP1-203ENST00000431146 LEMD1Q68G75 181 aa13.12□□□□□ -0.31
USHBP1-203ENST00000431146 TTC9CQ8N5M4 171 aa13.12□□□□□ -0.31
USHBP1-203ENST00000431146 RNF2Q99496 336 aa13.12□□□□□ -0.31
USHBP1-203ENST00000431146 B4DEV8 164 aa13.12□□□□□ -0.31
USHBP1-203ENST00000431146 ATP6V0E1O15342 81 aa13.12□□□□□ -0.31
USHBP1-203ENST00000431146 CIDEAO60543 219 aa13.12□□□□□ -0.31
USHBP1-203ENST00000431146 LYZP61626 148 aa13.12□□□□□ -0.31
USHBP1-203ENST00000431146 PIFOQ8TCI5 191 aa13.12□□□□□ -0.31
USHBP1-203ENST00000431146 TRBV20OR9-2A0A075B6H5 130 aa13.11□□□□□ -0.31
USHBP1-203ENST00000431146 SLC25A16P16260 332 aa13.11□□□□□ -0.31
USHBP1-203ENST00000431146 OR1L6Q8NGR2 347 aa13.11□□□□□ -0.31
USHBP1-203ENST00000431146 YPEL4Q96NS1 127 aa13.11□□□□□ -0.31
USHBP1-203ENST00000431146 TXNDC17Q9BRA2 123 aa13.11□□□□□ -0.31
USHBP1-203ENST00000431146 PAXXQ9BUH6 204 aa13.11□□□□□ -0.31
USHBP1-203ENST00000431146 TMUB1Q9BVT8 246 aa13.11□□□□□ -0.31
USHBP1-203ENST00000431146 ELOA3CA0A087WX78 387 aaPredicted RBP13.1□□□□□ -0.31
USHBP1-203ENST00000431146 GGTLC3B5MD39 225 aa13.1□□□□□ -0.31
USHBP1-203ENST00000431146 AP4M1O00189 453 aa13.1□□□□□ -0.31
USHBP1-203ENST00000431146 HYPMO75409 117 aa13.1□□□□□ -0.31
USHBP1-203ENST00000431146 OR2J3O76001 311 aa13.1□□□□□ -0.31
USHBP1-203ENST00000431146 MT-ND4LP03901 98 aa13.1□□□□□ -0.31
USHBP1-203ENST00000431146 HNF1AP20823 631 aa13.1□□□□□ -0.31
USHBP1-203ENST00000431146 A0A096LNT2 108 aa13.1□□□□□ -0.31
USHBP1-203ENST00000431146 NDUFB8O95169 186 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms