RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 MRPL2Q5T653 305 aaKnown RBP4.34□□□□□ -1.71
PTPN4-203ENST00000430976 LINC00526Q96FQ7 95 aa4.34□□□□□ -1.71
PTPN4-203ENST00000430976 FAM19A4Q96LR4 140 aa4.34□□□□□ -1.71
PTPN4-203ENST00000430976 C17orf77Q96MU5 243 aa4.34□□□□□ -1.71
PTPN4-203ENST00000430976 FANCD2OSQ96PS1 177 aa4.34□□□□□ -1.71
PTPN4-203ENST00000430976 GFI1Q99684 422 aa4.34□□□□□ -1.71
PTPN4-203ENST00000430976 SDF2L1Q9HCN8 221 aa4.34□□□□□ -1.71
PTPN4-203ENST00000430976 RABAC1Q9UI14 185 aa4.34□□□□□ -1.71
PTPN4-203ENST00000430976 SBF2Q86WG5 1849 aa4.34□□□□□ -1.71
PTPN4-203ENST00000430976 PHIPQ8WWQ0 1821 aa4.34□□□□□ -1.71
PTPN4-203ENST00000430976 ITSN1Q15811 1721 aa4.34□□□□□ -1.71
PTPN4-203ENST00000430976 PXDNLA1KZ92 1463 aa4.34□□□□□ -1.71
PTPN4-203ENST00000430976 IGHV1OR15-9A0A0B4J2B8 117 aa4.34□□□□□ -1.71
PTPN4-203ENST00000430976 NDUFC2-KCTD14E9PQ53 114 aa4.34□□□□□ -1.71
PTPN4-203ENST00000430976 ZNF726P1Q15940 193 aa4.34□□□□□ -1.71
PTPN4-203ENST00000430976 WDR38Q5JTN6 314 aa4.34□□□□□ -1.71
PTPN4-203ENST00000430976 MORN5Q5VZ52 161 aa4.34□□□□□ -1.71
PTPN4-203ENST00000430976 C22orf39Q6P5X5 142 aa4.34□□□□□ -1.71
PTPN4-203ENST00000430976 IGFL2Q6UWQ7 119 aa4.34□□□□□ -1.71
PTPN4-203ENST00000430976 FOXQ1Q9C009 403 aa4.34□□□□□ -1.71
PTPN4-203ENST00000430976 DNAJB12Q9NXW2 375 aaKnown RBP4.34□□□□□ -1.71
PTPN4-203ENST00000430976 ARHGAP21Q5T5U3 1957 aa4.34□□□□□ -1.72
PTPN4-203ENST00000430976 GOLGB1Q14789 3259 aaKnown RBP4.34□□□□□ -1.72
PTPN4-203ENST00000430976 CST7O76096 145 aa4.34□□□□□ -1.72
PTPN4-203ENST00000430976 DANCRP0C864 163 aa4.34□□□□□ -1.72
PTPN4-203ENST00000430976 CSRP2Q16527 193 aa4.34□□□□□ -1.72
PTPN4-203ENST00000430976 C20orf204Q6ZNR8 217 aa4.34□□□□□ -1.72
PTPN4-203ENST00000430976 TEN1Q86WV5 123 aa4.34□□□□□ -1.72
PTPN4-203ENST00000430976 PRIMA1Q86XR5 153 aa4.34□□□□□ -1.72
PTPN4-203ENST00000430976 KLHDC9Q8NEP7 349 aa4.34□□□□□ -1.72
PTPN4-203ENST00000430976 NEURL3Q96EH8 262 aa4.34□□□□□ -1.72
PTPN4-203ENST00000430976 HIST1H4GQ99525 98 aa4.34□□□□□ -1.72
PTPN4-203ENST00000430976 AGPAT4-IT1Q9H0P7 198 aa4.34□□□□□ -1.72
PTPN4-203ENST00000430976 MDFICQ9P1T7 246 aa4.34□□□□□ -1.72
PTPN4-203ENST00000430976 TNCP24821 2201 aa4.34□□□□□ -1.72
PTPN4-203ENST00000430976 C4AP0C0L4 1744 aa4.34□□□□□ -1.72
PTPN4-203ENST00000430976 C4BP0C0L5 1744 aa4.34□□□□□ -1.72
PTPN4-203ENST00000430976 CEP350Q5VT06 3117 aa4.34□□□□□ -1.72
PTPN4-203ENST00000430976 PLIN4Q96Q06 1357 aa4.34□□□□□ -1.72
PTPN4-203ENST00000430976 A0A0C4DFX4 3053 aa4.33□□□□□ -1.72
PTPN4-203ENST00000430976 LYPD3O95274 346 aa4.33□□□□□ -1.72
PTPN4-203ENST00000430976 TCL1BO95988 128 aa4.33□□□□□ -1.72
PTPN4-203ENST00000430976 TNFP01375 233 aa4.33□□□□□ -1.72
PTPN4-203ENST00000430976 RBP4P02753 201 aa4.33□□□□□ -1.72
PTPN4-203ENST00000430976 ZNF295-AS1Q8N0V1 137 aa4.33□□□□□ -1.72
PTPN4-203ENST00000430976 ZPLD1Q8TCW7 415 aa4.33□□□□□ -1.72
PTPN4-203ENST00000430976 LINC00479Q96M42 142 aa4.33□□□□□ -1.72
PTPN4-203ENST00000430976 HHLA3Q9XRX5 114 aa4.33□□□□□ -1.72
PTPN4-203ENST00000430976 CAMTA1Q9Y6Y1 1673 aa4.33□□□□□ -1.72
PTPN4-203ENST00000430976 TRBV20OR9-2A0A075B6H5 130 aa4.33□□□□□ -1.72
PTPN4-203ENST00000430976 TRAV9-1A0A075B6T8 112 aa4.33□□□□□ -1.72
PTPN4-203ENST00000430976 PLA2G12AQ9BZM1 189 aa4.33□□□□□ -1.72
PTPN4-203ENST00000430976 PLA2G2FQ9BZM2 168 aa4.33□□□□□ -1.72
PTPN4-203ENST00000430976 COL5A2P05997 1499 aaPredicted RBP4.33□□□□□ -1.72
PTPN4-203ENST00000430976 INS-IGF2F8WCM5 200 aa4.33□□□□□ -1.72
PTPN4-203ENST00000430976 H3BT86 120 aa4.33□□□□□ -1.72
PTPN4-203ENST00000430976 K7EMI3 77 aa4.33□□□□□ -1.72
PTPN4-203ENST00000430976 Q6Q795 121 aa4.33□□□□□ -1.72
PTPN4-203ENST00000430976 C9orf40Q8IXQ3 194 aa4.33□□□□□ -1.72
PTPN4-203ENST00000430976 OR5AS1Q8N127 324 aa4.33□□□□□ -1.72
PTPN4-203ENST00000430976 TMEM52Q8NDY8 209 aa4.33□□□□□ -1.72
PTPN4-203ENST00000430976 AICDAQ9GZX7 198 aa4.33□□□□□ -1.72
PTPN4-203ENST00000430976 Q9H3A6 140 aa4.33□□□□□ -1.72
PTPN4-203ENST00000430976 PEAK1Q9H792 1746 aa4.33□□□□□ -1.72
PTPN4-203ENST00000430976 EXPH5Q8NEV8 1989 aa4.33□□□□□ -1.72
PTPN4-203ENST00000430976 H7C2G1 150 aa4.32□□□□□ -1.72
PTPN4-203ENST00000430976 PPP1R11O60927 126 aaPredicted RBP4.32□□□□□ -1.72
PTPN4-203ENST00000430976 RRN3P1Q2M238 152 aa4.32□□□□□ -1.72
PTPN4-203ENST00000430976 PAQR4Q8N4S7 273 aaPredicted RBP4.32□□□□□ -1.72
PTPN4-203ENST00000430976 CLDND2Q8NHS1 167 aa4.32□□□□□ -1.72
PTPN4-203ENST00000430976 ABCA4P78363 2273 aa4.32□□□□□ -1.72
PTPN4-203ENST00000430976 IGHV1-45A0A0A0MS14 117 aa4.32□□□□□ -1.72
PTPN4-203ENST00000430976 C15orf61A6NNL5 157 aa4.32□□□□□ -1.72
PTPN4-203ENST00000430976 COX7CP15954 63 aa4.32□□□□□ -1.72
PTPN4-203ENST00000430976 ICAM4Q14773 271 aa4.32□□□□□ -1.72
PTPN4-203ENST00000430976 RSPO4Q2I0M5 234 aaPredicted RBP4.32□□□□□ -1.72
PTPN4-203ENST00000430976 Q5XG85 94 aa4.32□□□□□ -1.72
PTPN4-203ENST00000430976 FAM19A3Q7Z5A8 133 aa4.32□□□□□ -1.72
PTPN4-203ENST00000430976 WDR86Q86TI4 376 aa4.32□□□□□ -1.72
PTPN4-203ENST00000430976 PRR25Q96S07 402 aa4.32□□□□□ -1.72
PTPN4-203ENST00000430976 FMN2Q9NZ56 1722 aa4.32□□□□□ -1.72
PTPN4-203ENST00000430976 PHRF1Q9P1Y6 1649 aaKnown RBP4.32□□□□□ -1.72
PTPN4-203ENST00000430976 ALS2Q96Q42 1657 aa4.32□□□□□ -1.72
PTPN4-203ENST00000430976 TMEM256-PLSCR3K7ERE1 68 aa4.32□□□□□ -1.72
PTPN4-203ENST00000430976 SMIM11AP58511 58 aa4.32□□□□□ -1.72
PTPN4-203ENST00000430976 HILS1P60008 231 aa4.32□□□□□ -1.72
PTPN4-203ENST00000430976 RUSC1-AS1Q66K80 236 aa4.32□□□□□ -1.72
PTPN4-203ENST00000430976 GVQW1Q8N7I0 195 aa4.32□□□□□ -1.72
PTPN4-203ENST00000430976 SRXN1Q9BYN0 137 aa4.32□□□□□ -1.72
PTPN4-203ENST00000430976 HIGD1BQ9P298 99 aa4.32□□□□□ -1.72
PTPN4-203ENST00000430976 MPC1Q9Y5U8 109 aa4.32□□□□□ -1.72
PTPN4-203ENST00000430976 KIF26BQ2KJY2 2108 aa4.32□□□□□ -1.72
PTPN4-203ENST00000430976 TRAV12-2A0A075B6T6 113 aa4.32□□□□□ -1.72
PTPN4-203ENST00000430976 UBE2L5PA0A1B0GUS4 154 aa4.32□□□□□ -1.72
PTPN4-203ENST00000430976 A0A1W2PS18 150 aa4.32□□□□□ -1.72
PTPN4-203ENST00000430976 LOC730098B7Z3J9 87 aa4.32□□□□□ -1.72
PTPN4-203ENST00000430976 IGHG4P01861 327 aa4.32□□□□□ -1.72
PTPN4-203ENST00000430976 VSIG8P0DPA2 414 aa4.32□□□□□ -1.72
PTPN4-203ENST00000430976 HLA-DRB4P13762 266 aa4.32□□□□□ -1.72
PTPN4-203ENST00000430976 SUMO2P61956 95 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms