RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 C4orf46Q504U0 113 aa13.31□□□□□ -0.28
SSR4P1-202ENST00000429427 Q6ZWC4 215 aa13.31□□□□□ -0.28
SSR4P1-202ENST00000429427 STXBP6Q8NFX7 210 aa13.31□□□□□ -0.28
SSR4P1-202ENST00000429427 OR51G1Q8NGK1 321 aa13.31□□□□□ -0.28
SSR4P1-202ENST00000429427 COQ8AQ8NI60 647 aa13.31□□□□□ -0.28
SSR4P1-202ENST00000429427 RABAC1Q9UI14 185 aa13.31□□□□□ -0.28
SSR4P1-202ENST00000429427 DNASE2O00115 360 aaPredicted RBP13.3□□□□□ -0.28
SSR4P1-202ENST00000429427 BUB3O43684 328 aa13.3□□□□□ -0.28
SSR4P1-202ENST00000429427 MED6O75586 246 aa13.3□□□□□ -0.28
SSR4P1-202ENST00000429427 EWSR1Q01844 656 aaKnown RBP eCLIP13.3□□□□□ -0.28
SSR4P1-202ENST00000429427 MITD1Q8WV92 249 aa13.3□□□□□ -0.28
SSR4P1-202ENST00000429427 RNF125Q96EQ8 232 aa13.3□□□□□ -0.28
SSR4P1-202ENST00000429427 SLC35E1Q96K37 410 aa13.3□□□□□ -0.28
SSR4P1-202ENST00000429427 CIB3Q96Q77 187 aaPredicted RBP13.3□□□□□ -0.28
SSR4P1-202ENST00000429427 TBC1D24Q9ULP9 559 aa13.3□□□□□ -0.28
SSR4P1-202ENST00000429427 PAIP2BQ9ULR5 123 aaKnown RBP13.3□□□□□ -0.28
SSR4P1-202ENST00000429427 ZFP92A6NM28 416 aa13.29□□□□□ -0.28
SSR4P1-202ENST00000429427 TCRBP04435 133 aa13.29□□□□□ -0.28
SSR4P1-202ENST00000429427 PAX9P55771 341 aa13.29□□□□□ -0.28
SSR4P1-202ENST00000429427 RAB11AP62491 216 aa13.29□□□□□ -0.28
SSR4P1-202ENST00000429427 SPANXN5Q5MJ07 72 aa13.29□□□□□ -0.28
SSR4P1-202ENST00000429427 THAP8Q8NA92 274 aa13.29□□□□□ -0.28
SSR4P1-202ENST00000429427 RNF183Q96D59 192 aa13.29□□□□□ -0.28
SSR4P1-202ENST00000429427 CCDC32Q9BV29 185 aa13.29□□□□□ -0.28
SSR4P1-202ENST00000429427 TP53TG1Q9Y2A0 90 aa13.29□□□□□ -0.28
SSR4P1-202ENST00000429427 DNAH1Q9P2D7 4330 aa13.29□□□□□ -0.28
SSR4P1-202ENST00000429427 PLECQ15149 4684 aaKnown RBP13.28□□□□□ -0.28
SSR4P1-202ENST00000429427 PMS2P5A8MQ11 134 aa13.28□□□□□ -0.28
SSR4P1-202ENST00000429427 UBE2CO00762 179 aa13.28□□□□□ -0.28
SSR4P1-202ENST00000429427 SPRY2O43597 315 aa13.28□□□□□ -0.28
SSR4P1-202ENST00000429427 CMC4P56277 68 aaPredicted RBP13.28□□□□□ -0.28
SSR4P1-202ENST00000429427 LINC00299Q6ZSB3 139 aa13.28□□□□□ -0.28
SSR4P1-202ENST00000429427 TRAV6A0A075B6T7 132 aa13.27□□□□□ -0.29
SSR4P1-202ENST00000429427 SSSCA1O60232 199 aa13.27□□□□□ -0.29
SSR4P1-202ENST00000429427 CCNKO75909 580 aa13.27□□□□□ -0.29
SSR4P1-202ENST00000429427 ZNF688P0C7X2 276 aa13.27□□□□□ -0.29
SSR4P1-202ENST00000429427 NKX2-1P43699 371 aaPredicted RBP13.27□□□□□ -0.29
SSR4P1-202ENST00000429427 OR2F1Q13607 317 aa13.27□□□□□ -0.29
SSR4P1-202ENST00000429427 TMEM182Q6ZP80 229 aaPredicted RBP13.27□□□□□ -0.29
SSR4P1-202ENST00000429427 GRAMD2BQ96HH9 432 aa13.27□□□□□ -0.29
SSR4P1-202ENST00000429427 NARS2Q96I59 477 aaKnown RBP13.27□□□□□ -0.29
SSR4P1-202ENST00000429427 TRGV9Q99603 122 aa13.27□□□□□ -0.29
SSR4P1-202ENST00000429427 SEC22CQ9BRL7 303 aa13.27□□□□□ -0.29
SSR4P1-202ENST00000429427 NUDT15Q9NV35 164 aa13.27□□□□□ -0.29
SSR4P1-202ENST00000429427 RCL1Q9Y2P8 373 aaKnown RBP13.27□□□□□ -0.29
SSR4P1-202ENST00000429427 AGRNO00468 2067 aa13.26□□□□□ -0.29
SSR4P1-202ENST00000429427 CCSO14618 274 aa13.26□□□□□ -0.29
SSR4P1-202ENST00000429427 IFNA21P01568 189 aa13.26□□□□□ -0.29
SSR4P1-202ENST00000429427 GIG44P09565 113 aaPredicted RBP13.26□□□□□ -0.29
SSR4P1-202ENST00000429427 EIF2B2P49770 351 aaKnown RBP13.26□□□□□ -0.29
SSR4P1-202ENST00000429427 IAH1Q2TAA2 248 aaPredicted RBP13.26□□□□□ -0.29
SSR4P1-202ENST00000429427 GSG1LQ6UXU4 331 aa13.26□□□□□ -0.29
SSR4P1-202ENST00000429427 ACOT7LQ6ZUV0 252 aa13.26□□□□□ -0.29
SSR4P1-202ENST00000429427 ZBTB8BQ8NAP8 495 aaPredicted RBP13.26□□□□□ -0.29
SSR4P1-202ENST00000429427 PBDC1Q9BVG4 233 aa13.26□□□□□ -0.29
SSR4P1-202ENST00000429427 CSTL1Q9H114 145 aa13.26□□□□□ -0.29
SSR4P1-202ENST00000429427 STRAPQ9Y3F4 350 aaKnown RBP13.26□□□□□ -0.29
SSR4P1-202ENST00000429427 A0A0J9YWU9 116 aa13.25□□□□□ -0.29
SSR4P1-202ENST00000429427 HELTA6NFD8 242 aa13.25□□□□□ -0.29
SSR4P1-202ENST00000429427 KNCNA6PVL3 124 aa13.25□□□□□ -0.29
SSR4P1-202ENST00000429427 LYZP61626 148 aa13.25□□□□□ -0.29
SSR4P1-202ENST00000429427 OR8G2PQ6IF36 304 aa13.25□□□□□ -0.29
SSR4P1-202ENST00000429427 SIGLEC15Q6ZMC9 328 aa13.25□□□□□ -0.29
SSR4P1-202ENST00000429427 GATA2P23769 480 aaPredicted RBP13.24□□□□□ -0.29
SSR4P1-202ENST00000429427 RPP30P78346 268 aaKnown RBP13.24□□□□□ -0.29
SSR4P1-202ENST00000429427 IFITM3Q01628 133 aa13.24□□□□□ -0.29
SSR4P1-202ENST00000429427 TMEM14EPQ6UXP3 125 aa13.24□□□□□ -0.29
SSR4P1-202ENST00000429427 TRPT1Q86TN4 253 aaKnown RBP13.24□□□□□ -0.29
SSR4P1-202ENST00000429427 SMIM8Q96KF7 97 aa13.24□□□□□ -0.29
SSR4P1-202ENST00000429427 NRN1Q9NPD7 142 aa13.24□□□□□ -0.29
SSR4P1-202ENST00000429427 PSENENQ9NZ42 101 aa13.24□□□□□ -0.29
SSR4P1-202ENST00000429427 MBPP02686 304 aaPredicted RBP13.23□□□□□ -0.29
SSR4P1-202ENST00000429427 ASAH1Q13510 395 aa13.23□□□□□ -0.29
SSR4P1-202ENST00000429427 ZNF431Q8TF32 576 aaPredicted RBP13.23□□□□□ -0.29
SSR4P1-202ENST00000429427 C17orf77Q96MU5 243 aa13.23□□□□□ -0.29
SSR4P1-202ENST00000429427 WDR12Q9GZL7 423 aaKnown RBP13.23□□□□□ -0.29
SSR4P1-202ENST00000429427 ALMS1Q8TCU4 4167 aa13.23□□□□□ -0.29
SSR4P1-202ENST00000429427 HYDINQ4G0P3 5121 aa13.22□□□□□ -0.29
SSR4P1-202ENST00000429427 SNRPGP15A8MWD9 76 aa13.22□□□□□ -0.29
SSR4P1-202ENST00000429427 SCGB1D2O95969 90 aa13.22□□□□□ -0.29
SSR4P1-202ENST00000429427 CA1P00915 261 aaPredicted RBP13.22□□□□□ -0.29
SSR4P1-202ENST00000429427 C4BPBP20851 252 aa13.22□□□□□ -0.29
SSR4P1-202ENST00000429427 AP2S1P53680 142 aaPredicted RBP13.22□□□□□ -0.29
SSR4P1-202ENST00000429427 ARL16Q0P5N6 197 aa13.22□□□□□ -0.29
SSR4P1-202ENST00000429427 PSMG4Q5JS54 123 aa13.22□□□□□ -0.29
SSR4P1-202ENST00000429427 IL17DQ8TAD2 202 aa13.22□□□□□ -0.29
SSR4P1-202ENST00000429427 S100ZQ8WXG8 99 aa13.22□□□□□ -0.29
SSR4P1-202ENST00000429427 PTTG2Q9NZH5 202 aa13.22□□□□□ -0.29
SSR4P1-202ENST00000429427 GSKIPQ9P0R6 139 aa13.22□□□□□ -0.29
SSR4P1-202ENST00000429427 SOCS3O14543 225 aa13.21□□□□□ -0.29
SSR4P1-202ENST00000429427 H2AFB2P0C5Z0 115 aa13.21□□□□□ -0.29
SSR4P1-202ENST00000429427 METTL15P1P0C7V9 234 aa13.21□□□□□ -0.29
SSR4P1-202ENST00000429427 AKR1C1Q04828 323 aa13.21□□□□□ -0.29
SSR4P1-202ENST00000429427 C11orf1Q9H5F2 150 aa13.21□□□□□ -0.29
SSR4P1-202ENST00000429427 LCE6AA0A183 80 aa13.2□□□□□ -0.3
SSR4P1-202ENST00000429427 C7orf66A4D0T2 115 aa13.2□□□□□ -0.3
SSR4P1-202ENST00000429427 FABP1P07148 127 aa13.2□□□□□ -0.3
SSR4P1-202ENST00000429427 DEFB1P60022 68 aa13.2□□□□□ -0.3
SSR4P1-202ENST00000429427 ACTL10Q5JWF8 245 aa13.2□□□□□ -0.3
SSR4P1-202ENST00000429427 TMEM144Q7Z5S9 345 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms