RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 NUPL2O15504 423 aaKnown RBP9.87□□□□□ -0.83
HMGB3P4-201ENST00000428776 COX7A2P2O60397 106 aa9.87□□□□□ -0.83
HMGB3P4-201ENST00000428776 CLEC3BP05452 202 aa9.87□□□□□ -0.83
HMGB3P4-201ENST00000428776 PSG1P11464 419 aa9.87□□□□□ -0.83
HMGB3P4-201ENST00000428776 FAM209BQ5JX69 171 aa9.87□□□□□ -0.83
HMGB3P4-201ENST00000428776 SPSB3Q6PJ21 355 aa9.87□□□□□ -0.83
HMGB3P4-201ENST00000428776 IL34Q6ZMJ4 242 aa9.87□□□□□ -0.83
HMGB3P4-201ENST00000428776 SSX7Q7RTT5 188 aa9.87□□□□□ -0.83
HMGB3P4-201ENST00000428776 COMMD7Q86VX2 200 aa9.87□□□□□ -0.83
HMGB3P4-201ENST00000428776 OR51G1Q8NGK1 321 aa9.87□□□□□ -0.83
HMGB3P4-201ENST00000428776 Q8WTZ3 238 aa9.87□□□□□ -0.83
HMGB3P4-201ENST00000428776 MARC2Q969Z3 335 aa9.87□□□□□ -0.83
HMGB3P4-201ENST00000428776 C16orf95Q9H693 158 aa9.87□□□□□ -0.83
HMGB3P4-201ENST00000428776 SLC25A22Q9H936 323 aa9.87□□□□□ -0.83
HMGB3P4-201ENST00000428776 F8P00451 2351 aa9.86□□□□□ -0.83
HMGB3P4-201ENST00000428776 MAP1LC3B2A6NCE7 125 aa9.86□□□□□ -0.83
HMGB3P4-201ENST00000428776 TCF21O43680 179 aa9.86□□□□□ -0.83
HMGB3P4-201ENST00000428776 HYPMO75409 117 aa9.86□□□□□ -0.83
HMGB3P4-201ENST00000428776 OR5G3P0C626 314 aa9.86□□□□□ -0.83
HMGB3P4-201ENST00000428776 GPR183P32249 361 aa9.86□□□□□ -0.83
HMGB3P4-201ENST00000428776 FAM78BQ5VT40 261 aa9.86□□□□□ -0.83
HMGB3P4-201ENST00000428776 C10orf113Q5VZT2 155 aa9.86□□□□□ -0.83
HMGB3P4-201ENST00000428776 LCN15Q6UWW0 184 aa9.86□□□□□ -0.83
HMGB3P4-201ENST00000428776 CLEC19AQ6UXS0 136 aa9.86□□□□□ -0.83
HMGB3P4-201ENST00000428776 PATE2Q6UY27 113 aa9.86□□□□□ -0.83
HMGB3P4-201ENST00000428776 RNF152Q8N8N0 203 aa9.86□□□□□ -0.83
HMGB3P4-201ENST00000428776 TMEM37Q8WXS4 190 aa9.86□□□□□ -0.83
HMGB3P4-201ENST00000428776 MRPL32Q9BYC8 188 aaKnown RBP9.86□□□□□ -0.83
HMGB3P4-201ENST00000428776 MAP1LC3BQ9GZQ8 125 aa9.86□□□□□ -0.83
HMGB3P4-201ENST00000428776 SEPSECSQ9HD40 501 aaKnown RBP9.86□□□□□ -0.83
HMGB3P4-201ENST00000428776 FUT9Q9Y231 359 aa9.86□□□□□ -0.83
HMGB3P4-201ENST00000428776 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.85□□□□□ -0.83
HMGB3P4-201ENST00000428776 WI2-2373I1.2A0A1W2PRP0 233 aa9.85□□□□□ -0.83
HMGB3P4-201ENST00000428776 RAB19A4D1S5 217 aa9.85□□□□□ -0.83
HMGB3P4-201ENST00000428776 CYSRT1A8MQ03 144 aa9.85□□□□□ -0.83
HMGB3P4-201ENST00000428776 TGOLN2O43493 480 aa9.85□□□□□ -0.83
HMGB3P4-201ENST00000428776 OR2C1O95371 312 aa9.85□□□□□ -0.83
HMGB3P4-201ENST00000428776 ORM2P19652 201 aa9.85□□□□□ -0.83
HMGB3P4-201ENST00000428776 ADMP35318 185 aa9.85□□□□□ -0.83
HMGB3P4-201ENST00000428776 KIAA0141Q14154 515 aaPredicted RBP9.85□□□□□ -0.83
HMGB3P4-201ENST00000428776 ZNF343Q6P1L6 599 aa9.85□□□□□ -0.83
HMGB3P4-201ENST00000428776 ZNF600Q6ZNG1 722 aa9.85□□□□□ -0.83
HMGB3P4-201ENST00000428776 EIF4E3Q8N5X7 224 aaKnown RBP9.85□□□□□ -0.83
HMGB3P4-201ENST00000428776 MYOZ3Q8TDC0 251 aa9.85□□□□□ -0.83
HMGB3P4-201ENST00000428776 CHRDL1Q9BU40 450 aa9.85□□□□□ -0.83
HMGB3P4-201ENST00000428776 DOK5Q9P104 306 aa9.85□□□□□ -0.83
HMGB3P4-201ENST00000428776 FN1P02751 2386 aaKnown RBP9.84□□□□□ -0.83
HMGB3P4-201ENST00000428776 NDUFA7O95182 113 aa9.84□□□□□ -0.83
HMGB3P4-201ENST00000428776 STAG3L2P0CL84 134 aa9.84□□□□□ -0.83
HMGB3P4-201ENST00000428776 STAG3L3P0CL85 134 aa9.84□□□□□ -0.83
HMGB3P4-201ENST00000428776 ARL3P36405 182 aa9.84□□□□□ -0.83
HMGB3P4-201ENST00000428776 TAS2R45P59539 299 aa9.84□□□□□ -0.83
HMGB3P4-201ENST00000428776 LYZP61626 148 aa9.84□□□□□ -0.83
HMGB3P4-201ENST00000428776 CCL20P78556 96 aa9.84□□□□□ -0.83
HMGB3P4-201ENST00000428776 RELQ04864 619 aaPredicted RBP9.84□□□□□ -0.83
HMGB3P4-201ENST00000428776 PMS2P11Q13670 270 aa9.84□□□□□ -0.83
HMGB3P4-201ENST00000428776 C10orf99Q6UWK7 81 aa9.84□□□□□ -0.83
HMGB3P4-201ENST00000428776 LCNL1Q6ZST4 164 aa9.84□□□□□ -0.83
HMGB3P4-201ENST00000428776 S100A7AQ86SG5 101 aa9.84□□□□□ -0.83
HMGB3P4-201ENST00000428776 KLHDC1Q8N7A1 406 aa9.84□□□□□ -0.83
HMGB3P4-201ENST00000428776 ZNF491Q8N8L2 437 aa9.84□□□□□ -0.83
HMGB3P4-201ENST00000428776 OR4X2Q8NGF9 303 aa9.84□□□□□ -0.83
HMGB3P4-201ENST00000428776 OR1B1Q8NGR6 318 aa9.84□□□□□ -0.83
HMGB3P4-201ENST00000428776 RNF125Q96EQ8 232 aa9.84□□□□□ -0.83
HMGB3P4-201ENST00000428776 TECRQ9NZ01 308 aaKnown RBP9.84□□□□□ -0.83
HMGB3P4-201ENST00000428776 MRPL27Q9P0M9 148 aaKnown RBP9.84□□□□□ -0.83
HMGB3P4-201ENST00000428776 HIGD1AQ9Y241 93 aa9.84□□□□□ -0.83
HMGB3P4-201ENST00000428776 A0A1B0GV50 99 aa9.83□□□□□ -0.84
HMGB3P4-201ENST00000428776 HMGB3O15347 200 aaKnown RBP9.83□□□□□ -0.84
HMGB3P4-201ENST00000428776 CXorf1O96002 111 aa9.83□□□□□ -0.84
HMGB3P4-201ENST00000428776 IL4P05112 153 aa9.83□□□□□ -0.84
HMGB3P4-201ENST00000428776 RPLP1P05386 114 aaKnown RBP9.83□□□□□ -0.84
HMGB3P4-201ENST00000428776 C8orf88P0DMB2 117 aa9.83□□□□□ -0.84
HMGB3P4-201ENST00000428776 FGF8P55075 233 aaPredicted RBP9.83□□□□□ -0.84
HMGB3P4-201ENST00000428776 MIR17HGQ75NE6 70 aa9.83□□□□□ -0.84
HMGB3P4-201ENST00000428776 LINC00305Q7Z4B0 112 aa9.83□□□□□ -0.84
HMGB3P4-201ENST00000428776 OR5AU1Q8NGC0 362 aa9.83□□□□□ -0.84
HMGB3P4-201ENST00000428776 UBE2E2Q96LR5 201 aa9.83□□□□□ -0.84
HMGB3P4-201ENST00000428776 PBDC1Q9BVG4 233 aa9.83□□□□□ -0.84
HMGB3P4-201ENST00000428776 GNB4Q9HAV0 340 aa9.83□□□□□ -0.84
HMGB3P4-201ENST00000428776 PUS1Q9Y606 427 aaKnown RBP eCLIP9.83□□□□□ -0.84
HMGB3P4-201ENST00000428776 NIPBLQ6KC79 2804 aaeCLIP9.82□□□□□ -0.84
HMGB3P4-201ENST00000428776 PPP5D1E7EU14 171 aa9.82□□□□□ -0.84
HMGB3P4-201ENST00000428776 IGHV3-11P01762 117 aa9.82□□□□□ -0.84
HMGB3P4-201ENST00000428776 S100A7P31151 101 aa9.82□□□□□ -0.84
HMGB3P4-201ENST00000428776 PSMB3P49720 205 aa9.82□□□□□ -0.84
HMGB3P4-201ENST00000428776 PPT1P50897 306 aa9.82□□□□□ -0.84
HMGB3P4-201ENST00000428776 KHDC3LQ587J8 217 aa9.82□□□□□ -0.84
HMGB3P4-201ENST00000428776 SPATA31B1PQ5VZV4 182 aa9.82□□□□□ -0.84
HMGB3P4-201ENST00000428776 UQCC3Q6UW78 93 aa9.82□□□□□ -0.84
HMGB3P4-201ENST00000428776 PQLC2Q6ZP29 291 aa9.82□□□□□ -0.84
HMGB3P4-201ENST00000428776 LINC01006Q8NI28 216 aa9.82□□□□□ -0.84
HMGB3P4-201ENST00000428776 FAM210AQ96ND0 272 aa9.82□□□□□ -0.84
HMGB3P4-201ENST00000428776 UHRF2Q96PU4 802 aa9.82□□□□□ -0.84
HMGB3P4-201ENST00000428776 CITED4Q96RK1 184 aa9.82□□□□□ -0.84
HMGB3P4-201ENST00000428776 PEF1Q9UBV8 284 aaKnown RBP9.82□□□□□ -0.84
HMGB3P4-201ENST00000428776 ANK3Q12955 4377 aaKnown RBP9.82□□□□□ -0.84
HMGB3P4-201ENST00000428776 ANKRD34BA5PLL1 514 aa9.81□□□□□ -0.84
HMGB3P4-201ENST00000428776 RBFOX3A6NFN3 312 aa9.81□□□□□ -0.84
HMGB3P4-201ENST00000428776 BMPR1BO00238 502 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms