RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 TMEM252Q8N6L7 170 aa5.89□□□□□ -1.47
CNOT4-206ENST00000428680 OR13C6PQ8NH95 151 aa5.89□□□□□ -1.47
CNOT4-206ENST00000428680 RCHY1Q96PM5 261 aa5.89□□□□□ -1.47
CNOT4-206ENST00000428680 TRBV5-7A0A0A0MS05 114 aa5.89□□□□□ -1.47
CNOT4-206ENST00000428680 TRAV21A0A0B4J279 112 aa5.89□□□□□ -1.47
CNOT4-206ENST00000428680 LY6G6DO95868 133 aa5.89□□□□□ -1.47
CNOT4-206ENST00000428680 AMBPP02760 352 aa5.89□□□□□ -1.47
CNOT4-206ENST00000428680 C10orf55Q5SWW7 151 aa5.89□□□□□ -1.47
CNOT4-206ENST00000428680 LINC00114Q6XXX2 140 aa5.89□□□□□ -1.47
CNOT4-206ENST00000428680 SLC25A48Q6ZT89 311 aaKnown RBP5.89□□□□□ -1.47
CNOT4-206ENST00000428680 CD177Q8N6Q3 437 aa5.89□□□□□ -1.47
CNOT4-206ENST00000428680 LAMA1P25391 3075 aa5.89□□□□□ -1.47
CNOT4-206ENST00000428680 MAST4O15021 2626 aa5.88□□□□□ -1.47
CNOT4-206ENST00000428680 HSPB1P04792 205 aaKnown RBP5.88□□□□□ -1.47
CNOT4-206ENST00000428680 MMP9P14780 707 aa5.88□□□□□ -1.47
CNOT4-206ENST00000428680 FXYD7P58549 80 aa5.88□□□□□ -1.47
CNOT4-206ENST00000428680 RPL36AP83881 106 aaKnown RBP5.88□□□□□ -1.47
CNOT4-206ENST00000428680 BAK1Q16611 211 aa5.88□□□□□ -1.47
CNOT4-206ENST00000428680 HIST3H3Q16695 136 aa5.88□□□□□ -1.47
CNOT4-206ENST00000428680 COX19Q49B96 90 aa5.88□□□□□ -1.47
CNOT4-206ENST00000428680 FBLN7Q53RD9 439 aa5.88□□□□□ -1.47
CNOT4-206ENST00000428680 FAM71F2Q6NXP2 309 aa5.88□□□□□ -1.47
CNOT4-206ENST00000428680 ZNF497Q6ZNH5 498 aa5.88□□□□□ -1.47
CNOT4-206ENST00000428680 TMEM91Q6ZNR0 172 aa5.88□□□□□ -1.47
CNOT4-206ENST00000428680 RPL36ALQ969Q0 106 aaKnown RBP5.88□□□□□ -1.47
CNOT4-206ENST00000428680 GPR132Q9UNW8 380 aa5.88□□□□□ -1.47
CNOT4-206ENST00000428680 BAHCC1Q9P281 2608 aa5.88□□□□□ -1.47
CNOT4-206ENST00000428680 A0A1B0GTI1 187 aa5.88□□□□□ -1.47
CNOT4-206ENST00000428680 SHISA9B4DS77 424 aa5.88□□□□□ -1.47
CNOT4-206ENST00000428680 ATP6V0E1O15342 81 aa5.88□□□□□ -1.47
CNOT4-206ENST00000428680 RBFOX2O43251 390 aaKnown RBP eCLIP5.88□□□□□ -1.47
CNOT4-206ENST00000428680 GPX4P36969 197 aaPredicted RBP5.88□□□□□ -1.47
CNOT4-206ENST00000428680 NDPQ00604 133 aa5.88□□□□□ -1.47
CNOT4-206ENST00000428680 SRSF9Q13242 221 aaKnown RBP eCLIP5.88□□□□□ -1.47
CNOT4-206ENST00000428680 TMEM144Q7Z5S9 345 aa5.88□□□□□ -1.47
CNOT4-206ENST00000428680 H1FOOQ8IZA3 346 aaPredicted RBP5.88□□□□□ -1.47
CNOT4-206ENST00000428680 CLRN3Q8NCR9 226 aa5.88□□□□□ -1.47
CNOT4-206ENST00000428680 LIME1Q9H400 295 aa5.88□□□□□ -1.47
CNOT4-206ENST00000428680 C7orf66A4D0T2 115 aa5.88□□□□□ -1.47
CNOT4-206ENST00000428680 FGF16O43320 207 aa5.88□□□□□ -1.47
CNOT4-206ENST00000428680 VENTXO95231 258 aa5.88□□□□□ -1.47
CNOT4-206ENST00000428680 EFNB1P98172 346 aa5.88□□□□□ -1.47
CNOT4-206ENST00000428680 TMEM183BQ1AE95 376 aa5.88□□□□□ -1.47
CNOT4-206ENST00000428680 BSXQ3C1V8 233 aa5.88□□□□□ -1.47
CNOT4-206ENST00000428680 ZNF562Q6V9R5 426 aa5.88□□□□□ -1.47
CNOT4-206ENST00000428680 ZNF705AQ6ZN79 300 aaPredicted RBP5.88□□□□□ -1.47
CNOT4-206ENST00000428680 TMEM183AQ8IXX5 376 aa5.88□□□□□ -1.47
CNOT4-206ENST00000428680 OR1P1Q8NH06 330 aa5.88□□□□□ -1.47
CNOT4-206ENST00000428680 OR52E5Q8NH55 327 aa5.88□□□□□ -1.47
CNOT4-206ENST00000428680 ALKBH7Q9BT30 221 aaPredicted RBP5.88□□□□□ -1.47
CNOT4-206ENST00000428680 KLK15Q9H2R5 256 aa5.88□□□□□ -1.47
CNOT4-206ENST00000428680 MBNL3Q9NUK0 354 aaKnown RBP5.88□□□□□ -1.47
CNOT4-206ENST00000428680 ALX3O95076 343 aa5.87□□□□□ -1.47
CNOT4-206ENST00000428680 RNASE1P07998 156 aaKnown RBP5.87□□□□□ -1.47
CNOT4-206ENST00000428680 HNRNPA3P51991 378 aaKnown RBP5.87□□□□□ -1.47
CNOT4-206ENST00000428680 CCL18P55774 89 aa5.87□□□□□ -1.47
CNOT4-206ENST00000428680 UCP3P55916 312 aa5.87□□□□□ -1.47
CNOT4-206ENST00000428680 BTN1A1Q13410 526 aa5.87□□□□□ -1.47
CNOT4-206ENST00000428680 C8orf86Q6ZUL3 223 aa5.87□□□□□ -1.47
CNOT4-206ENST00000428680 HAPLN4Q86UW8 402 aa5.87□□□□□ -1.47
CNOT4-206ENST00000428680 DLX4Q92988 240 aaPredicted RBP5.87□□□□□ -1.47
CNOT4-206ENST00000428680 ASCL2Q99929 193 aa5.87□□□□□ -1.47
CNOT4-206ENST00000428680 BET1LQ9NYM9 111 aa5.87□□□□□ -1.47
CNOT4-206ENST00000428680 VAX2Q9UIW0 290 aa5.87□□□□□ -1.47
CNOT4-206ENST00000428680 ZNF256Q9Y2P7 627 aaPredicted RBP5.87□□□□□ -1.47
CNOT4-206ENST00000428680 ETV2O00321 342 aaPredicted RBP5.87□□□□□ -1.47
CNOT4-206ENST00000428680 CTDSPLO15194 276 aa5.87□□□□□ -1.47
CNOT4-206ENST00000428680 CACNG7P62955 275 aa5.87□□□□□ -1.47
CNOT4-206ENST00000428680 ELOBQ15370 118 aa5.87□□□□□ -1.47
CNOT4-206ENST00000428680 SELENOHQ8IZQ5 122 aaKnown RBP5.87□□□□□ -1.47
CNOT4-206ENST00000428680 RARRES2Q99969 163 aa5.87□□□□□ -1.47
CNOT4-206ENST00000428680 C2orf88Q9BSF0 95 aa5.87□□□□□ -1.47
CNOT4-206ENST00000428680 DCAF16Q9NXF7 216 aa5.87□□□□□ -1.47
CNOT4-206ENST00000428680 TRAPPC1Q9Y5R8 145 aa5.87□□□□□ -1.47
CNOT4-206ENST00000428680 NCOA6Q14686 2063 aaPredicted RBP5.87□□□□□ -1.47
CNOT4-206ENST00000428680 LOC389332A0A1B0GUA5 103 aa5.87□□□□□ -1.47
CNOT4-206ENST00000428680 TGOLN2O43493 480 aa5.87□□□□□ -1.47
CNOT4-206ENST00000428680 KRTDAPP60985 99 aa5.87□□□□□ -1.47
CNOT4-206ENST00000428680 TNFSF18Q9UNG2 199 aa5.87□□□□□ -1.47
CNOT4-206ENST00000428680 IGKV1D-17A0A075B6S4 117 aa5.87□□□□□ -1.47
CNOT4-206ENST00000428680 B4DEV8 164 aa5.87□□□□□ -1.47
CNOT4-206ENST00000428680 G3V318 75 aa5.87□□□□□ -1.47
CNOT4-206ENST00000428680 UCP1P25874 307 aa5.87□□□□□ -1.47
CNOT4-206ENST00000428680 COTL1Q14019 142 aa5.87□□□□□ -1.47
CNOT4-206ENST00000428680 TMEM97Q5BJF2 176 aa5.87□□□□□ -1.47
CNOT4-206ENST00000428680 STPG2Q8N412 459 aa5.87□□□□□ -1.47
CNOT4-206ENST00000428680 SIGLEC9Q9Y336 463 aa5.87□□□□□ -1.47
CNOT4-206ENST00000428680 NBPF19A0A087WUL8 3843 aa5.87□□□□□ -1.47
CNOT4-206ENST00000428680 SRRM4A7MD48 611 aaKnown RBP5.86□□□□□ -1.47
CNOT4-206ENST00000428680 DUTP33316 252 aaKnown RBP5.86□□□□□ -1.47
CNOT4-206ENST00000428680 PSMB2P49721 201 aa5.86□□□□□ -1.47
CNOT4-206ENST00000428680 C9orf139Q6ZV77 190 aa5.86□□□□□ -1.47
CNOT4-206ENST00000428680 REC114Q7Z4M0 266 aa5.86□□□□□ -1.47
CNOT4-206ENST00000428680 C1QL4Q86Z23 238 aa5.86□□□□□ -1.47
CNOT4-206ENST00000428680 TXNDC17Q9BRA2 123 aa5.86□□□□□ -1.47
CNOT4-206ENST00000428680 TRBV20OR9-2A0A075B6H5 130 aa5.86□□□□□ -1.47
CNOT4-206ENST00000428680 CLDN34H7C241 214 aa5.86□□□□□ -1.47
CNOT4-206ENST00000428680 CRLF1O75462 422 aa5.86□□□□□ -1.47
CNOT4-206ENST00000428680 ATP6V0CP27449 155 aa5.86□□□□□ -1.47
CNOT4-206ENST00000428680 RPS11P62280 158 aaKnown RBP eCLIP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms