RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 PUS1Q9Y606 427 aaKnown RBP eCLIP9.46□□□□□ -0.9
GPC1-204ENST00000426280 STAB2Q8WWQ8 2551 aa9.45□□□□□ -0.9
GPC1-204ENST00000426280 TRAV14DV4A0A0A6YYC5 116 aa9.45□□□□□ -0.9
GPC1-204ENST00000426280 FAM24AA6NFZ4 105 aa9.45□□□□□ -0.9
GPC1-204ENST00000426280 L7N2F9 121 aa9.45□□□□□ -0.9
GPC1-204ENST00000426280 SLC25A4P12235 298 aa9.45□□□□□ -0.9
GPC1-204ENST00000426280 TFPI2P48307 235 aa9.45□□□□□ -0.9
GPC1-204ENST00000426280 ATP5IP56385 69 aaPredicted RBP9.45□□□□□ -0.9
GPC1-204ENST00000426280 VAMP2P63027 116 aa9.45□□□□□ -0.9
GPC1-204ENST00000426280 RPP30P78346 268 aaKnown RBP9.45□□□□□ -0.9
GPC1-204ENST00000426280 RELQ04864 619 aaPredicted RBP9.45□□□□□ -0.9
GPC1-204ENST00000426280 GAMTQ14353 236 aa9.45□□□□□ -0.9
GPC1-204ENST00000426280 OR8G2PQ6IF36 304 aa9.45□□□□□ -0.9
GPC1-204ENST00000426280 TMEM14EPQ6UXP3 125 aa9.45□□□□□ -0.9
GPC1-204ENST00000426280 GBGT1Q8N5D6 347 aa9.45□□□□□ -0.9
GPC1-204ENST00000426280 OR11H7Q8NGC8 314 aa9.45□□□□□ -0.9
GPC1-204ENST00000426280 SPAG8Q99932 426 aaPredicted RBP9.45□□□□□ -0.9
GPC1-204ENST00000426280 H0YIZ8 118 aa9.44□□□□□ -0.9
GPC1-204ENST00000426280 C3orf84H3BNL1 204 aa9.44□□□□□ -0.9
GPC1-204ENST00000426280 TSC22D2O75157 780 aa9.44□□□□□ -0.9
GPC1-204ENST00000426280 IGLC1P0CG04 106 aa9.44□□□□□ -0.9
GPC1-204ENST00000426280 GPX4P36969 197 aaPredicted RBP9.44□□□□□ -0.9
GPC1-204ENST00000426280 BCAP31P51572 246 aa9.44□□□□□ -0.9
GPC1-204ENST00000426280 TAS2R30P59541 319 aa9.44□□□□□ -0.9
GPC1-204ENST00000426280 ARL16Q0P5N6 197 aa9.44□□□□□ -0.9
GPC1-204ENST00000426280 ETFRF1Q6IPR1 90 aa9.44□□□□□ -0.9
GPC1-204ENST00000426280 APRG1Q8IVJ8 170 aa9.44□□□□□ -0.9
GPC1-204ENST00000426280 FAM24BQ8N5W8 94 aa9.44□□□□□ -0.9
GPC1-204ENST00000426280 NMES1Q9C002 83 aa9.44□□□□□ -0.9
GPC1-204ENST00000426280 MED28Q9H204 178 aa9.44□□□□□ -0.9
GPC1-204ENST00000426280 VSIRQ9H7M9 311 aa9.44□□□□□ -0.9
GPC1-204ENST00000426280 OR5AC2Q9NZP5 309 aa9.44□□□□□ -0.9
GPC1-204ENST00000426280 NBEAL2Q6ZNJ1 2754 aa9.44□□□□□ -0.9
GPC1-204ENST00000426280 DNAH7Q8WXX0 4024 aa9.44□□□□□ -0.9
GPC1-204ENST00000426280 DFFBO76075 338 aa9.43□□□□□ -0.9
GPC1-204ENST00000426280 OR10J1P30954 320 aa9.43□□□□□ -0.9
GPC1-204ENST00000426280 RRAS2P62070 204 aaPredicted RBP9.43□□□□□ -0.9
GPC1-204ENST00000426280 ZNF600Q6ZNG1 722 aa9.43□□□□□ -0.9
GPC1-204ENST00000426280 ACOT7LQ6ZUV0 252 aa9.43□□□□□ -0.9
GPC1-204ENST00000426280 TCF24Q7RTU0 167 aa9.43□□□□□ -0.9
GPC1-204ENST00000426280 WFDC3Q8IUB2 231 aa9.43□□□□□ -0.9
GPC1-204ENST00000426280 PPP1R1CQ8WVI7 109 aa9.43□□□□□ -0.9
GPC1-204ENST00000426280 SLC35E1Q96K37 410 aa9.43□□□□□ -0.9
GPC1-204ENST00000426280 OVOL2Q9BRP0 275 aa9.43□□□□□ -0.9
GPC1-204ENST00000426280 IGKV1D-37A0A075B6S9 117 aa9.42□□□□□ -0.9
GPC1-204ENST00000426280 LOC102724200A0A096LPH7 203 aaPredicted RBP9.42□□□□□ -0.9
GPC1-204ENST00000426280 IGSF23A1L1A6 192 aa9.42□□□□□ -0.9
GPC1-204ENST00000426280 DEDDO75618 318 aa9.42□□□□□ -0.9
GPC1-204ENST00000426280 CST7O76096 145 aa9.42□□□□□ -0.9
GPC1-204ENST00000426280 RPL35AP18077 110 aaKnown RBP9.42□□□□□ -0.9
GPC1-204ENST00000426280 PVALBP20472 110 aaPredicted RBP9.42□□□□□ -0.9
GPC1-204ENST00000426280 CAV2P51636 162 aa9.42□□□□□ -0.9
GPC1-204ENST00000426280 EWSR1Q01844 656 aaKnown RBP eCLIP9.42□□□□□ -0.9
GPC1-204ENST00000426280 LAMTOR1Q6IAA8 161 aa9.42□□□□□ -0.9
GPC1-204ENST00000426280 GGTLC1Q9BX51 225 aa9.42□□□□□ -0.9
GPC1-204ENST00000426280 IGKV1OR2-108A0A075B7D4 117 aa9.41□□□□□ -0.9
GPC1-204ENST00000426280 TRAV30A0A087WSZ9 112 aa9.41□□□□□ -0.9
GPC1-204ENST00000426280 SMCO3A2RU48 225 aa9.41□□□□□ -0.9
GPC1-204ENST00000426280 MPC2O95563 127 aa9.41□□□□□ -0.9
GPC1-204ENST00000426280 CYCSP99999 105 aaKnown RBP9.41□□□□□ -0.9
GPC1-204ENST00000426280 ZNF90Q03938 601 aa9.41□□□□□ -0.9
GPC1-204ENST00000426280 TMEM252Q8N6L7 170 aa9.41□□□□□ -0.9
GPC1-204ENST00000426280 OR1S2Q8NGQ3 325 aa9.41□□□□□ -0.9
GPC1-204ENST00000426280 RNF126Q9BV68 326 aa9.41□□□□□ -0.9
GPC1-204ENST00000426280 U3KQE9 123 aa9.41□□□□□ -0.9
GPC1-204ENST00000426280 ZFP92A6NM28 416 aa9.4□□□□□ -0.9
GPC1-204ENST00000426280 RLN2P04090 185 aa9.4□□□□□ -0.9
GPC1-204ENST00000426280 LYL1P12980 280 aa9.4□□□□□ -0.9
GPC1-204ENST00000426280 CRYBB3P26998 211 aa9.4□□□□□ -0.9
GPC1-204ENST00000426280 OR2F1Q13607 317 aa9.4□□□□□ -0.9
GPC1-204ENST00000426280 TMEM217Q8N7C4 229 aa9.4□□□□□ -0.9
GPC1-204ENST00000426280 THAP8Q8NA92 274 aa9.4□□□□□ -0.9
GPC1-204ENST00000426280 OR10P1Q8NGE3 313 aa9.4□□□□□ -0.9
GPC1-204ENST00000426280 MS4A6AQ9H2W1 248 aa9.4□□□□□ -0.9
GPC1-204ENST00000426280 MAP6D1Q9H9H5 199 aa9.4□□□□□ -0.9
GPC1-204ENST00000426280 LYRM2Q9NU23 88 aaPredicted RBP9.4□□□□□ -0.9
GPC1-204ENST00000426280 STARD9Q9P2P6 4700 aa9.4□□□□□ -0.9
GPC1-204ENST00000426280 OR4C46A6NHA9 309 aa9.39□□□□□ -0.91
GPC1-204ENST00000426280 E5RGE8 158 aa9.39□□□□□ -0.91
GPC1-204ENST00000426280 TOMM40O96008 361 aa9.39□□□□□ -0.91
GPC1-204ENST00000426280 PSG1P11464 419 aa9.39□□□□□ -0.91
GPC1-204ENST00000426280 NPPCP23582 126 aa9.39□□□□□ -0.91
GPC1-204ENST00000426280 GATA2P23769 480 aaPredicted RBP9.39□□□□□ -0.91
GPC1-204ENST00000426280 YPEL3P61236 119 aaPredicted RBP9.39□□□□□ -0.91
GPC1-204ENST00000426280 DLK1P80370 383 aa9.39□□□□□ -0.91
GPC1-204ENST00000426280 NHLH2Q02577 135 aa9.39□□□□□ -0.91
GPC1-204ENST00000426280 AKR1C1Q04828 323 aa9.39□□□□□ -0.91
GPC1-204ENST00000426280 SLC38A11Q08AI6 406 aa9.39□□□□□ -0.91
GPC1-204ENST00000426280 USF2Q15853 346 aaPredicted RBP9.39□□□□□ -0.91
GPC1-204ENST00000426280 Q5BKY6 102 aa9.39□□□□□ -0.91
GPC1-204ENST00000426280 TMEM182Q6ZP80 229 aaPredicted RBP9.39□□□□□ -0.91
GPC1-204ENST00000426280 Q8WTZ3 238 aa9.39□□□□□ -0.91
GPC1-204ENST00000426280 SCGB2A1O75556 95 aa9.38□□□□□ -0.91
GPC1-204ENST00000426280 IL4P05112 153 aa9.38□□□□□ -0.91
GPC1-204ENST00000426280 RD3LP0DJH9 198 aa9.38□□□□□ -0.91
GPC1-204ENST00000426280 LEMD1Q68G75 181 aa9.38□□□□□ -0.91
GPC1-204ENST00000426280 TMEM144Q7Z5S9 345 aa9.38□□□□□ -0.91
GPC1-204ENST00000426280 STPG3Q8N7X2 389 aa9.38□□□□□ -0.91
GPC1-204ENST00000426280 CHAC2Q8WUX2 184 aa9.38□□□□□ -0.91
GPC1-204ENST00000426280 TRGV9Q99603 122 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms