RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 PET117Q6UWS5 81 aa13.09□□□□□ -0.31
PKP4-205ENST00000426248 Q6ZPA2 131 aa13.09□□□□□ -0.31
PKP4-205ENST00000426248 RRHO14718 337 aa13.09□□□□□ -0.31
PKP4-205ENST00000426248 NMUP48645 174 aa13.09□□□□□ -0.31
PKP4-205ENST00000426248 TMEM14EPQ6UXP3 125 aa13.09□□□□□ -0.31
PKP4-205ENST00000426248 OR8A1Q8NGG7 326 aa13.09□□□□□ -0.31
PKP4-205ENST00000426248 HSD17B10Q99714 261 aaKnown RBP13.09□□□□□ -0.31
PKP4-205ENST00000426248 LRRK2Q5S007 2527 aa13.09□□□□□ -0.31
PKP4-205ENST00000426248 HLA-DRB1P01911 266 aa13.08□□□□□ -0.31
PKP4-205ENST00000426248 WDR82Q6UXN9 313 aa13.08□□□□□ -0.31
PKP4-205ENST00000426248 NPVFQ9HCQ7 196 aa13.08□□□□□ -0.31
PKP4-205ENST00000426248 A1L4Q6 167 aa13.08□□□□□ -0.32
PKP4-205ENST00000426248 TIMD4Q96H15 378 aa13.08□□□□□ -0.32
PKP4-205ENST00000426248 HSPB8Q9UJY1 196 aa13.08□□□□□ -0.32
PKP4-205ENST00000426248 TRGV10A0A0A0MS01 117 aa13.08□□□□□ -0.32
PKP4-205ENST00000426248 LYNX1G3V0Z9 82 aa13.08□□□□□ -0.32
PKP4-205ENST00000426248 NDUFB3O43676 98 aa13.08□□□□□ -0.32
PKP4-205ENST00000426248 FCGR3BO75015 233 aa13.08□□□□□ -0.32
PKP4-205ENST00000426248 LYNX1P0DP58 116 aa13.08□□□□□ -0.32
PKP4-205ENST00000426248 MC5RP33032 325 aa13.08□□□□□ -0.32
PKP4-205ENST00000426248 ARL3P36405 182 aa13.08□□□□□ -0.32
PKP4-205ENST00000426248 ZNF138P52744 262 aa13.08□□□□□ -0.32
PKP4-205ENST00000426248 DRAM1Q8N682 238 aa13.08□□□□□ -0.32
PKP4-205ENST00000426248 DCTN5Q9BTE1 182 aa13.08□□□□□ -0.32
PKP4-205ENST00000426248 WDFY3Q8IZQ1 3526 aa13.07□□□□□ -0.32
PKP4-205ENST00000426248 FOXH1O75593 365 aa13.07□□□□□ -0.32
PKP4-205ENST00000426248 GCSHP23434 173 aa13.07□□□□□ -0.32
PKP4-205ENST00000426248 CRYBA4P53673 196 aa13.07□□□□□ -0.32
PKP4-205ENST00000426248 RTL8BQ17RB0 113 aa13.07□□□□□ -0.32
PKP4-205ENST00000426248 C22orf34Q6ZV56 151 aa13.07□□□□□ -0.32
PKP4-205ENST00000426248 LINC00173Q6ZV60 143 aa13.07□□□□□ -0.32
PKP4-205ENST00000426248 V9GYV3 84 aa13.07□□□□□ -0.32
PKP4-205ENST00000426248 PLAUP00749 431 aa13.07□□□□□ -0.32
PKP4-205ENST00000426248 FCER1GP30273 86 aa13.07□□□□□ -0.32
PKP4-205ENST00000426248 RPS20P60866 119 aaKnown RBP13.07□□□□□ -0.32
PKP4-205ENST00000426248 HSD52Q0P140 79 aa13.07□□□□□ -0.32
PKP4-205ENST00000426248 TNFRSF19Q9NS68 423 aa13.07□□□□□ -0.32
PKP4-205ENST00000426248 PPIAL4EA0A075B759 164 aa13.07□□□□□ -0.32
PKP4-205ENST00000426248 TEX48A0A1B0GUV7 120 aa13.07□□□□□ -0.32
PKP4-205ENST00000426248 PPIAL4FP0DN26 164 aa13.07□□□□□ -0.32
PKP4-205ENST00000426248 C20orf204Q6ZNR8 217 aa13.07□□□□□ -0.32
PKP4-205ENST00000426248 Q6ZR03 302 aa13.07□□□□□ -0.32
PKP4-205ENST00000426248 MRPL27Q9P0M9 148 aaKnown RBP13.07□□□□□ -0.32
PKP4-205ENST00000426248 PRB1P04280 392 aa13.07□□□□□ -0.32
PKP4-205ENST00000426248 ACP7Q6ZNF0 438 aa13.07□□□□□ -0.32
PKP4-205ENST00000426248 LEAP2Q969E1 77 aa13.07□□□□□ -0.32
PKP4-205ENST00000426248 RAB1BQ9H0U4 201 aa13.07□□□□□ -0.32
PKP4-205ENST00000426248 LSM4Q9Y4Z0 139 aaKnown RBP13.07□□□□□ -0.32
PKP4-205ENST00000426248 LGALS7P47929 136 aa13.06□□□□□ -0.32
PKP4-205ENST00000426248 TXNDC17Q9BRA2 123 aa13.06□□□□□ -0.32
PKP4-205ENST00000426248 SYS1-DBNDD2H3BUS1 97 aa13.06□□□□□ -0.32
PKP4-205ENST00000426248 APOBEC3AP31941 199 aaPredicted RBP13.06□□□□□ -0.32
PKP4-205ENST00000426248 REG1BP48304 166 aa13.06□□□□□ -0.32
PKP4-205ENST00000426248 ZNF462Q96JM2 2506 aa13.06□□□□□ -0.32
PKP4-205ENST00000426248 MALRD1Q5VYJ5 2156 aa13.06□□□□□ -0.32
PKP4-205ENST00000426248 TRAV24A0A0B4J272 114 aa13.06□□□□□ -0.32
PKP4-205ENST00000426248 IGLV1-44P01699 117 aa13.06□□□□□ -0.32
PKP4-205ENST00000426248 IGHV1-46P01743 117 aa13.06□□□□□ -0.32
PKP4-205ENST00000426248 KIR3DS1Q14943 382 aa13.06□□□□□ -0.32
PKP4-205ENST00000426248 ABHD12Q8N2K0 398 aa13.06□□□□□ -0.32
PKP4-205ENST00000426248 MTURNQ8N3F0 131 aa13.06□□□□□ -0.32
PKP4-205ENST00000426248 USP9XQ93008 2570 aaPredicted RBP13.05□□□□□ -0.32
PKP4-205ENST00000426248 C17orf100A8MU93 164 aa13.05□□□□□ -0.32
PKP4-205ENST00000426248 H0YJW9 148 aa13.05□□□□□ -0.32
PKP4-205ENST00000426248 COL8A2P25067 703 aa13.05□□□□□ -0.32
PKP4-205ENST00000426248 GPR12P47775 334 aa13.05□□□□□ -0.32
PKP4-205ENST00000426248 FGF23Q9GZV9 251 aaPredicted RBP13.05□□□□□ -0.32
PKP4-205ENST00000426248 RAB9BQ9NP90 201 aa13.05□□□□□ -0.32
PKP4-205ENST00000426248 GUSBP1Q15486 140 aa13.05□□□□□ -0.32
PKP4-205ENST00000426248 VWC2Q2TAL6 325 aa13.05□□□□□ -0.32
PKP4-205ENST00000426248 WDR86Q86TI4 376 aa13.05□□□□□ -0.32
PKP4-205ENST00000426248 DAZAP1Q96EP5 407 aaKnown RBP13.05□□□□□ -0.32
PKP4-205ENST00000426248 HIVEP2P31629 2446 aa13.05□□□□□ -0.32
PKP4-205ENST00000426248 TEX50A0A1B0GTY4 177 aa13.05□□□□□ -0.32
PKP4-205ENST00000426248 FAM90A10PA6NDY2 464 aa13.05□□□□□ -0.32
PKP4-205ENST00000426248 FAM90A18PA6NE21 464 aa13.05□□□□□ -0.32
PKP4-205ENST00000426248 FAM90A16PA6NEW6 464 aa13.05□□□□□ -0.32
PKP4-205ENST00000426248 FAM90A20PA6NIJ5 464 aa13.05□□□□□ -0.32
PKP4-205ENST00000426248 FAM90A8PA6NJQ4 464 aa13.05□□□□□ -0.32
PKP4-205ENST00000426248 FAM90A7PA6NKC0 464 aa13.05□□□□□ -0.32
PKP4-205ENST00000426248 FAM90A22PA8MWA6 464 aa13.05□□□□□ -0.32
PKP4-205ENST00000426248 FAM90A12PA8MX19 464 aa13.05□□□□□ -0.32
PKP4-205ENST00000426248 FAM90A5PA8MXJ8 464 aa13.05□□□□□ -0.32
PKP4-205ENST00000426248 FAM90A23PA8MXZ1 464 aa13.05□□□□□ -0.32
PKP4-205ENST00000426248 FAM90A15PP0C7V4 464 aa13.05□□□□□ -0.32
PKP4-205ENST00000426248 FAM90A13PP0C7W8 464 aa13.05□□□□□ -0.32
PKP4-205ENST00000426248 FAM90A14PP0C7W9 464 aa13.05□□□□□ -0.32
PKP4-205ENST00000426248 FAM90A24PP0C7X0 464 aa13.05□□□□□ -0.32
PKP4-205ENST00000426248 MBNL2Q5VZF2 373 aaKnown RBP13.05□□□□□ -0.32
PKP4-205ENST00000426248 MOB1BQ7L9L4 216 aa13.05□□□□□ -0.32
PKP4-205ENST00000426248 LINC00596Q86U02 117 aa13.04□□□□□ -0.32
PKP4-205ENST00000426248 FAM216BQ8N7L0 139 aa13.04□□□□□ -0.32
PKP4-205ENST00000426248 ZNF48Q96MX3 618 aaPredicted RBP13.04□□□□□ -0.32
PKP4-205ENST00000426248 ADIPOQQ15848 244 aa13.04□□□□□ -0.32
PKP4-205ENST00000426248 ZNF585BQ52M93 769 aa13.04□□□□□ -0.32
PKP4-205ENST00000426248 CFAP161Q6P656 301 aa13.04□□□□□ -0.32
PKP4-205ENST00000426248 A0A1W2PRE2 83 aa13.04□□□□□ -0.32
PKP4-205ENST00000426248 FAM90A26D6RGX4 464 aa13.04□□□□□ -0.32
PKP4-205ENST00000426248 STAG3L3P0CL85 134 aa13.04□□□□□ -0.32
PKP4-205ENST00000426248 LINC00205P59089 165 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms