RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 INSIG2Q9Y5U4 225 aa10.83□□□□□ -0.68
USP42-203ENST00000426246 IGHV3-49A0A0A0MS15 119 aa10.83□□□□□ -0.68
USP42-203ENST00000426246 CBY3A6NI87 242 aa10.83□□□□□ -0.68
USP42-203ENST00000426246 COL8A1P27658 744 aa10.83□□□□□ -0.68
USP42-203ENST00000426246 ARF6P62330 175 aa10.83□□□□□ -0.68
USP42-203ENST00000426246 WT1-ASQ06250 92 aa10.83□□□□□ -0.68
USP42-203ENST00000426246 FOXL1Q12952 345 aa10.83□□□□□ -0.68
USP42-203ENST00000426246 TMEM200BQ69YZ2 307 aa10.83□□□□□ -0.68
USP42-203ENST00000426246 GOLT1AQ6ZVE7 132 aa10.83□□□□□ -0.68
USP42-203ENST00000426246 TMEM144Q7Z5S9 345 aa10.83□□□□□ -0.68
USP42-203ENST00000426246 PYGO2Q9BRQ0 406 aa10.83□□□□□ -0.68
USP42-203ENST00000426246 CDC42EP3Q9UKI2 254 aa10.83□□□□□ -0.68
USP42-203ENST00000426246 GOLT1BQ9Y3E0 138 aa10.83□□□□□ -0.68
USP42-203ENST00000426246 DCHS2Q6V1P9 2916 aa10.83□□□□□ -0.68
USP42-203ENST00000426246 A0A1B0GWJ7 208 aa10.83□□□□□ -0.68
USP42-203ENST00000426246 DPRXA6NFQ7 191 aa10.83□□□□□ -0.68
USP42-203ENST00000426246 CGB1A6NKQ9 187 aa10.83□□□□□ -0.68
USP42-203ENST00000426246 TIMM23BQ5SRD1 257 aa10.83□□□□□ -0.68
USP42-203ENST00000426246 C1orf159Q96HA4 380 aa10.83□□□□□ -0.68
USP42-203ENST00000426246 GAL3ST2Q9H3Q3 398 aa10.83□□□□□ -0.68
USP42-203ENST00000426246 SIAH2O43255 324 aa10.82□□□□□ -0.68
USP42-203ENST00000426246 ZC2HC1AQ96GY0 325 aa10.82□□□□□ -0.68
USP42-203ENST00000426246 TP53TG3Q9ULZ0 132 aa10.82□□□□□ -0.68
USP42-203ENST00000426246 C3orf79P0CE67 100 aa10.82□□□□□ -0.68
USP42-203ENST00000426246 RUSC1-AS1Q66K80 236 aa10.82□□□□□ -0.68
USP42-203ENST00000426246 CIARTQ8N365 385 aaPredicted RBP10.82□□□□□ -0.68
USP42-203ENST00000426246 PRR7Q8TB68 274 aa10.82□□□□□ -0.68
USP42-203ENST00000426246 JKAMPQ9P055 326 aa10.82□□□□□ -0.68
USP42-203ENST00000426246 V9GYV3 84 aa10.82□□□□□ -0.68
USP42-203ENST00000426246 PIEZO1Q92508 2521 aa10.82□□□□□ -0.68
USP42-203ENST00000426246 HIVEP3Q5T1R4 2406 aa10.82□□□□□ -0.68
USP42-203ENST00000426246 UCNP55089 124 aa10.82□□□□□ -0.68
USP42-203ENST00000426246 CD69Q07108 199 aa10.82□□□□□ -0.68
USP42-203ENST00000426246 SP5Q6BEB4 398 aaPredicted RBP10.82□□□□□ -0.68
USP42-203ENST00000426246 UNQ5815/PRO19632Q6UWF5 114 aa10.82□□□□□ -0.68
USP42-203ENST00000426246 Q71RC1 249 aaPredicted RBP10.82□□□□□ -0.68
USP42-203ENST00000426246 RPUSD1Q9UJJ7 312 aaKnown RBP10.82□□□□□ -0.68
USP42-203ENST00000426246 IGHV3-66A0A0C4DH42 116 aa10.81□□□□□ -0.68
USP42-203ENST00000426246 RNASE2P10153 161 aaKnown RBP10.81□□□□□ -0.68
USP42-203ENST00000426246 SUB1P53999 127 aaKnown RBP eCLIP10.81□□□□□ -0.68
USP42-203ENST00000426246 BPIFB3P59826 476 aa10.81□□□□□ -0.68
USP42-203ENST00000426246 PRCDQ00LT1 54 aa10.81□□□□□ -0.68
USP42-203ENST00000426246 NUDT10Q8NFP7 164 aa10.81□□□□□ -0.68
USP42-203ENST00000426246 NUDT11Q96G61 164 aa10.81□□□□□ -0.68
USP42-203ENST00000426246 LSM4Q9Y4Z0 139 aaKnown RBP10.81□□□□□ -0.68
USP42-203ENST00000426246 VAMP3Q15836 100 aa10.81□□□□□ -0.68
USP42-203ENST00000426246 VMA21Q3ZAQ7 101 aa10.81□□□□□ -0.68
USP42-203ENST00000426246 C1orf194Q5T5A4 169 aa10.81□□□□□ -0.68
USP42-203ENST00000426246 RPEQ96AT9 228 aa10.81□□□□□ -0.68
USP42-203ENST00000426246 TMEM14BQ9NUH8 114 aa10.81□□□□□ -0.68
USP42-203ENST00000426246 CENPVQ7Z7K6 275 aaPredicted RBP10.81□□□□□ -0.68
USP42-203ENST00000426246 IGKV3-7A0A075B6H7 116 aa10.8□□□□□ -0.68
USP42-203ENST00000426246 A0A1W2PS18 150 aa10.8□□□□□ -0.68
USP42-203ENST00000426246 BMPR1BO00238 502 aa10.8□□□□□ -0.68
USP42-203ENST00000426246 PEX7O00628 323 aa10.8□□□□□ -0.68
USP42-203ENST00000426246 P01737 135 aa10.8□□□□□ -0.68
USP42-203ENST00000426246 KIR2DS2P43631 304 aa10.8□□□□□ -0.68
USP42-203ENST00000426246 C3orf36Q3SXR2 165 aa10.8□□□□□ -0.68
USP42-203ENST00000426246 MBNL2Q5VZF2 373 aaKnown RBP10.8□□□□□ -0.68
USP42-203ENST00000426246 ZNF841Q6ZN19 808 aa10.8□□□□□ -0.68
USP42-203ENST00000426246 TCTEX1D1Q8N7M0 179 aa10.8□□□□□ -0.68
USP42-203ENST00000426246 DEFB104AQ8WTQ1 72 aa10.8□□□□□ -0.68
USP42-203ENST00000426246 ZNF503Q96F45 646 aa10.8□□□□□ -0.68
USP42-203ENST00000426246 RAB9BQ9NP90 201 aa10.8□□□□□ -0.68
USP42-203ENST00000426246 NBEAP1P0C6P0 100 aa10.8□□□□□ -0.68
USP42-203ENST00000426246 PTTG1IPP53801 180 aa10.8□□□□□ -0.68
USP42-203ENST00000426246 TMEM116Q8NCL8 245 aa10.8□□□□□ -0.68
USP42-203ENST00000426246 ADTRPQ96IZ2 230 aa10.8□□□□□ -0.68
USP42-203ENST00000426246 NAA38Q9BRA0 125 aaKnown RBP10.8□□□□□ -0.68
USP42-203ENST00000426246 TMEM208Q9BTX3 173 aa10.8□□□□□ -0.68
USP42-203ENST00000426246 EIF4EBP1Q13541 118 aaPredicted RBP10.79□□□□□ -0.68
USP42-203ENST00000426246 OR4C13Q8NGP0 309 aa10.79□□□□□ -0.68
USP42-203ENST00000426246 VSTM5A8MXK1 200 aa10.79□□□□□ -0.68
USP42-203ENST00000426246 M0R3E3 92 aa10.79□□□□□ -0.68
USP42-203ENST00000426246 GPX1P07203 203 aa10.79□□□□□ -0.68
USP42-203ENST00000426246 HTR1DP28221 377 aa10.79□□□□□ -0.68
USP42-203ENST00000426246 ETFRF1Q6IPR1 90 aa10.79□□□□□ -0.68
USP42-203ENST00000426246 WASHC3Q9Y3C0 194 aa10.79□□□□□ -0.68
USP42-203ENST00000426246 NOTCH2Q04721 2471 aa10.79□□□□□ -0.68
USP42-203ENST00000426246 hDV102S1A0JD36 115 aa10.79□□□□□ -0.68
USP42-203ENST00000426246 RPL27AP46776 148 aaKnown RBP10.79□□□□□ -0.68
USP42-203ENST00000426246 LINC00173Q6ZV60 143 aa10.79□□□□□ -0.68
USP42-203ENST00000426246 NUP35Q8NFH5 326 aa10.79□□□□□ -0.68
USP42-203ENST00000426246 C17orf100A8MU93 164 aa10.78□□□□□ -0.68
USP42-203ENST00000426246 AMY1AP04745 511 aa10.78□□□□□ -0.68
USP42-203ENST00000426246 S100A7P31151 101 aa10.78□□□□□ -0.68
USP42-203ENST00000426246 PAFAH1B2P68402 229 aa10.78□□□□□ -0.68
USP42-203ENST00000426246 SRSF12Q8WXF0 261 aaKnown RBP10.78□□□□□ -0.68
USP42-203ENST00000426246 CLEC7AQ9BXN2 247 aa10.78□□□□□ -0.68
USP42-203ENST00000426246 FOXA2Q9Y261 457 aaPredicted RBP10.78□□□□□ -0.68
USP42-203ENST00000426246 A0A1W2PPI3 338 aa10.78□□□□□ -0.68
USP42-203ENST00000426246 F2RL2O00254 374 aa10.78□□□□□ -0.68
USP42-203ENST00000426246 UQCRFS1P47985 274 aa10.78□□□□□ -0.68
USP42-203ENST00000426246 PNKDQ8N490 385 aa10.78□□□□□ -0.68
USP42-203ENST00000426246 OR8A1Q8NGG7 326 aa10.78□□□□□ -0.68
USP42-203ENST00000426246 ZNF324O75467 553 aaPredicted RBP10.78□□□□□ -0.68
USP42-203ENST00000426246 FCGR2BP31994 310 aaPredicted RBP10.78□□□□□ -0.68
USP42-203ENST00000426246 ADIPOQQ15848 244 aa10.78□□□□□ -0.68
USP42-203ENST00000426246 RNASEH2CQ8TDP1 164 aaKnown RBP10.78□□□□□ -0.68
USP42-203ENST00000426246 C17orf77Q96MU5 243 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms