RNA–Protein interactions for RNA: ENST00000425967.7

FGFR1-211, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 5,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-211ENST00000425967 CKS1BP61024 79 aa10.4□□□□□ -0.75
FGFR1-211ENST00000425967 DEFB121Q5J5C9 76 aa10.4□□□□□ -0.75
FGFR1-211ENST00000425967 S100A7L2Q5SY68 101 aa10.4□□□□□ -0.75
FGFR1-211ENST00000425967 TREML4Q6UXN2 200 aa10.4□□□□□ -0.75
FGFR1-211ENST00000425967 NABP1Q96AH0 204 aa10.4□□□□□ -0.75
FGFR1-211ENST00000425967 MESP1Q9BRJ9 268 aa10.4□□□□□ -0.75
FGFR1-211ENST00000425967 SLC25A2Q9BXI2 301 aa10.4□□□□□ -0.75
FGFR1-211ENST00000425967 GNB1LQ9BYB4 327 aa10.4□□□□□ -0.75
FGFR1-211ENST00000425967 ARHGEF17Q96PE2 2063 aaPredicted RBP10.4□□□□□ -0.75
FGFR1-211ENST00000425967 CHCHD1Q96BP2 118 aaKnown RBP10.39□□□□□ -0.75
FGFR1-211ENST00000425967 LINC00158P58513 81 aa10.39□□□□□ -0.75
FGFR1-211ENST00000425967 KLRD1Q13241 179 aa10.39□□□□□ -0.75
FGFR1-211ENST00000425967 MBD3L1Q8WWY6 194 aa10.39□□□□□ -0.75
FGFR1-211ENST00000425967 GSN-AS1Q9NRJ2 163 aa10.39□□□□□ -0.75
FGFR1-211ENST00000425967 IGHV4-39P01824 125 aa10.39□□□□□ -0.75
FGFR1-211ENST00000425967 IGKCP01834 107 aa10.39□□□□□ -0.75
FGFR1-211ENST00000425967 PSG1P11464 419 aa10.39□□□□□ -0.75
FGFR1-211ENST00000425967 C10orf55Q5SWW7 151 aa10.39□□□□□ -0.75
FGFR1-211ENST00000425967 KIF26BQ2KJY2 2108 aa10.39□□□□□ -0.75
FGFR1-211ENST00000425967 BRCA1P38398 1863 aaKnown RBP10.39□□□□□ -0.75
FGFR1-211ENST00000425967 IGKV1D-8A0A087WSZ0 117 aa10.39□□□□□ -0.75
FGFR1-211ENST00000425967 TRAV5A0A0B4J249 113 aa10.39□□□□□ -0.75
FGFR1-211ENST00000425967 TMEM8BA6NDV4 472 aa10.39□□□□□ -0.75
FGFR1-211ENST00000425967 PMS2P5A8MQ11 134 aa10.39□□□□□ -0.75
FGFR1-211ENST00000425967 SLC25A16P16260 332 aa10.39□□□□□ -0.75
FGFR1-211ENST00000425967 RPL36AP83881 106 aaKnown RBP10.39□□□□□ -0.75
FGFR1-211ENST00000425967 C9orf139Q6ZV77 190 aa10.39□□□□□ -0.75
FGFR1-211ENST00000425967 RPL36ALQ969Q0 106 aaKnown RBP10.39□□□□□ -0.75
FGFR1-211ENST00000425967 NHP2Q9NX24 153 aaKnown RBP10.39□□□□□ -0.75
FGFR1-211ENST00000425967 SELLP14151 372 aa10.39□□□□□ -0.75
FGFR1-211ENST00000425967 RPL15P61313 204 aaKnown RBP10.39□□□□□ -0.75
FGFR1-211ENST00000425967 TEX38Q6PEX7 206 aa10.39□□□□□ -0.75
FGFR1-211ENST00000425967 SLC25A48Q6ZT89 311 aaKnown RBP10.39□□□□□ -0.75
FGFR1-211ENST00000425967 CRIPAKQ8N1N5 446 aa10.39□□□□□ -0.75
FGFR1-211ENST00000425967 USMG5Q96IX5 58 aa10.39□□□□□ -0.75
FGFR1-211ENST00000425967 EP300Q09472 2414 aaPredicted RBP10.38□□□□□ -0.75
FGFR1-211ENST00000425967 A0A0G2JNJ9 132 aa10.38□□□□□ -0.75
FGFR1-211ENST00000425967 F8VVB4 439 aa10.38□□□□□ -0.75
FGFR1-211ENST00000425967 F8VWA3 439 aa10.38□□□□□ -0.75
FGFR1-211ENST00000425967 LINC01559Q495D7 138 aa10.38□□□□□ -0.75
FGFR1-211ENST00000425967 C17orf82Q86X59 251 aaPredicted RBP10.38□□□□□ -0.75
FGFR1-211ENST00000425967 SLC25A39Q9BZJ4 359 aaPredicted RBP10.38□□□□□ -0.75
FGFR1-211ENST00000425967 Q9UFV3 132 aa10.38□□□□□ -0.75
FGFR1-211ENST00000425967 PLXNA1Q9UIW2 1896 aa10.38□□□□□ -0.75
FGFR1-211ENST00000425967 IGKV2-40A0A087WW87 121 aaPredicted RBP10.38□□□□□ -0.75
FGFR1-211ENST00000425967 LOC105371267A0A1B0GV96 52 aa10.38□□□□□ -0.75
FGFR1-211ENST00000425967 IGKV2D-40P01614 121 aaPredicted RBP10.38□□□□□ -0.75
FGFR1-211ENST00000425967 C1QTNF4Q9BXJ3 329 aa10.38□□□□□ -0.75
FGFR1-211ENST00000425967 LINC00587B1AMM8 73 aa10.38□□□□□ -0.75
FGFR1-211ENST00000425967 H3BUT2 72 aa10.38□□□□□ -0.75
FGFR1-211ENST00000425967 HOXA3O43365 443 aaPredicted RBP10.38□□□□□ -0.75
FGFR1-211ENST00000425967 CA1P00915 261 aaPredicted RBP10.38□□□□□ -0.75
FGFR1-211ENST00000425967 GAS1P54826 345 aa10.38□□□□□ -0.75
FGFR1-211ENST00000425967 C5orf64Q2M2E5 130 aa10.38□□□□□ -0.75
FGFR1-211ENST00000425967 TRGV9Q99603 122 aa10.38□□□□□ -0.75
FGFR1-211ENST00000425967 SMPXQ9UHP9 88 aa10.38□□□□□ -0.75
FGFR1-211ENST00000425967 BRD3OSQ6XYD6 125 aa10.38□□□□□ -0.75
FGFR1-211ENST00000425967 PIP4P2Q8N4L2 257 aa10.38□□□□□ -0.75
FGFR1-211ENST00000425967 CD177Q8N6Q3 437 aa10.38□□□□□ -0.75
FGFR1-211ENST00000425967 TRAV9-2A0A087WT02 112 aa10.37□□□□□ -0.75
FGFR1-211ENST00000425967 TRAV8-2A0A0B4J237 113 aa10.37□□□□□ -0.75
FGFR1-211ENST00000425967 GGTLC3B5MD39 225 aa10.37□□□□□ -0.75
FGFR1-211ENST00000425967 LAGE3Q14657 143 aa10.37□□□□□ -0.75
FGFR1-211ENST00000425967 RNF166Q96A37 237 aaPredicted RBP10.37□□□□□ -0.75
FGFR1-211ENST00000425967 CST9LQ9H4G1 147 aa10.37□□□□□ -0.75
FGFR1-211ENST00000425967 IFI27L1Q96BM0 104 aa10.37□□□□□ -0.75
FGFR1-211ENST00000425967 GGTLC1Q9BX51 225 aa10.37□□□□□ -0.75
FGFR1-211ENST00000425967 JPT2Q9H910 190 aa10.37□□□□□ -0.75
FGFR1-211ENST00000425967 TRGV1A0A0A0MS02 117 aa10.37□□□□□ -0.75
FGFR1-211ENST00000425967 MBD3L4A6NDZ8 208 aaPredicted RBP10.37□□□□□ -0.75
FGFR1-211ENST00000425967 MBD3L3A6NE82 208 aaPredicted RBP10.37□□□□□ -0.75
FGFR1-211ENST00000425967 MBD3L5A6NJ08 208 aaPredicted RBP10.37□□□□□ -0.75
FGFR1-211ENST00000425967 ZNF138P52744 262 aa10.37□□□□□ -0.75
FGFR1-211ENST00000425967 MDS2Q8NDY4 140 aa10.37□□□□□ -0.75
FGFR1-211ENST00000425967 MBD3L2Q8NHZ7 208 aaPredicted RBP10.37□□□□□ -0.75
FGFR1-211ENST00000425967 C11orf68Q9H3H3 251 aaKnown RBP10.37□□□□□ -0.75
FGFR1-211ENST00000425967 LAMTOR2Q9Y2Q5 125 aa10.37□□□□□ -0.75
FGFR1-211ENST00000425967 INTS1Q8N201 2190 aaKnown RBP10.37□□□□□ -0.75
FGFR1-211ENST00000425967 CHD5Q8TDI0 1954 aa10.37□□□□□ -0.75
FGFR1-211ENST00000425967 PSPNO60542 156 aa10.37□□□□□ -0.75
FGFR1-211ENST00000425967 RNF114Q9Y508 228 aa10.37□□□□□ -0.75
FGFR1-211ENST00000425967 PATJQ8NI35 1801 aa10.37□□□□□ -0.75
FGFR1-211ENST00000425967 MST1P26927 711 aa10.36□□□□□ -0.75
FGFR1-211ENST00000425967 WFDC1Q9HC57 220 aa10.36□□□□□ -0.75
FGFR1-211ENST00000425967 A0A1B0GV72 72 aa10.36□□□□□ -0.75
FGFR1-211ENST00000425967 Q0VFX4 171 aa10.36□□□□□ -0.75
FGFR1-211ENST00000425967 ZNF876PQ49A33 203 aa10.36□□□□□ -0.75
FGFR1-211ENST00000425967 LINC01356Q8N9X3 169 aa10.36□□□□□ -0.75
FGFR1-211ENST00000425967 LINC00477Q96M19 166 aa10.36□□□□□ -0.75
FGFR1-211ENST00000425967 SCRT1Q9BWW7 348 aa10.36□□□□□ -0.75
FGFR1-211ENST00000425967 SCN8AQ9UQD0 1980 aa10.36□□□□□ -0.75
FGFR1-211ENST00000425967 SPTBN1Q01082 2364 aaKnown RBP10.36□□□□□ -0.75
FGFR1-211ENST00000425967 RALGAPA1Q6GYQ0 2036 aa10.36□□□□□ -0.75
FGFR1-211ENST00000425967 CD300EQ496F6 205 aaPredicted RBP10.36□□□□□ -0.75
FGFR1-211ENST00000425967 ASCL4Q6XD76 172 aa10.36□□□□□ -0.75
FGFR1-211ENST00000425967 A0A0U1RRA0 63 aa10.36□□□□□ -0.75
FGFR1-211ENST00000425967 FAM223BA6NKX1 122 aa10.36□□□□□ -0.75
FGFR1-211ENST00000425967 SRRM4A7MD48 611 aaKnown RBP10.36□□□□□ -0.75
FGFR1-211ENST00000425967 BUB1B-PAK6H3BSN5 160 aa10.36□□□□□ -0.75
FGFR1-211ENST00000425967 FAM223AQ8IWN6 122 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms