RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 FAM74A7A6NL05 159 aa11.3□□□□□ -0.6
CDK3-201ENST00000425876 M0R036 132 aa11.3□□□□□ -0.6
CDK3-201ENST00000425876 OR7C2O60412 319 aa11.3□□□□□ -0.6
CDK3-201ENST00000425876 SCGB2A1O75556 95 aa11.3□□□□□ -0.6
CDK3-201ENST00000425876 NDUFB8O95169 186 aa11.3□□□□□ -0.6
CDK3-201ENST00000425876 TOMM40O96008 361 aa11.3□□□□□ -0.6
CDK3-201ENST00000425876 IGF1P05019 195 aa11.3□□□□□ -0.6
CDK3-201ENST00000425876 RD3LP0DJH9 198 aa11.3□□□□□ -0.6
CDK3-201ENST00000425876 UBE2G2P60604 165 aa11.3□□□□□ -0.6
CDK3-201ENST00000425876 ECSCRQ19T08 205 aa11.3□□□□□ -0.6
CDK3-201ENST00000425876 TIGITQ495A1 244 aa11.3□□□□□ -0.6
CDK3-201ENST00000425876 CST9LP1Q5W188 147 aa11.3□□□□□ -0.6
CDK3-201ENST00000425876 LINC00305Q7Z4B0 112 aa11.3□□□□□ -0.6
CDK3-201ENST00000425876 OR51G1Q8NGK1 321 aa11.3□□□□□ -0.6
CDK3-201ENST00000425876 SLC25A2Q9BXI2 301 aa11.3□□□□□ -0.6
CDK3-201ENST00000425876 GSX1Q9H4S2 264 aaPredicted RBP11.3□□□□□ -0.6
CDK3-201ENST00000425876 ZNF355PQ9NSJ1 428 aa11.3□□□□□ -0.6
CDK3-201ENST00000425876 DOK5Q9P104 306 aa11.3□□□□□ -0.6
CDK3-201ENST00000425876 SVEP1Q4LDE5 3571 aa11.3□□□□□ -0.6
CDK3-201ENST00000425876 CSPG4Q6UVK1 2322 aa11.3□□□□□ -0.6
CDK3-201ENST00000425876 LINC01548A6NM66 108 aa11.29□□□□□ -0.6
CDK3-201ENST00000425876 GNG7O60262 68 aa11.29□□□□□ -0.6
CDK3-201ENST00000425876 OR2J3O76001 311 aa11.29□□□□□ -0.6
CDK3-201ENST00000425876 IGHG2P01859 326 aa11.29□□□□□ -0.6
CDK3-201ENST00000425876 ORM2P19652 201 aa11.29□□□□□ -0.6
CDK3-201ENST00000425876 OR5AU1Q8NGC0 362 aa11.29□□□□□ -0.6
CDK3-201ENST00000425876 OR1B1Q8NGR6 318 aa11.29□□□□□ -0.6
CDK3-201ENST00000425876 FBXL7Q9UJT9 491 aa11.29□□□□□ -0.6
CDK3-201ENST00000425876 YTHDF2Q9Y5A9 579 aaKnown RBP11.29□□□□□ -0.6
CDK3-201ENST00000425876 A0A1W2PRE2 83 aa11.28□□□□□ -0.6
CDK3-201ENST00000425876 ZNF727A8MUV8 499 aa11.28□□□□□ -0.6
CDK3-201ENST00000425876 B4DEV8 164 aa11.28□□□□□ -0.6
CDK3-201ENST00000425876 F8W735 103 aaPredicted RBP11.28□□□□□ -0.6
CDK3-201ENST00000425876 BRI3O95415 125 aa11.28□□□□□ -0.6
CDK3-201ENST00000425876 ATP5G3P48201 142 aa11.28□□□□□ -0.6
CDK3-201ENST00000425876 LY6EQ16553 131 aa11.28□□□□□ -0.6
CDK3-201ENST00000425876 DEFB112Q30KQ8 113 aa11.28□□□□□ -0.6
CDK3-201ENST00000425876 MORN5Q5VZ52 161 aa11.28□□□□□ -0.6
CDK3-201ENST00000425876 NECAP1Q8NC96 275 aa11.28□□□□□ -0.6
CDK3-201ENST00000425876 OR5R1Q8NH85 324 aa11.28□□□□□ -0.6
CDK3-201ENST00000425876 SMIM7Q9BQ49 75 aa11.28□□□□□ -0.6
CDK3-201ENST00000425876 SDF2L1Q9HCN8 221 aa11.28□□□□□ -0.6
CDK3-201ENST00000425876 SMCO4Q9NRQ5 59 aa11.28□□□□□ -0.6
CDK3-201ENST00000425876 MRPL27Q9P0M9 148 aaKnown RBP11.28□□□□□ -0.6
CDK3-201ENST00000425876 HIGD1AQ9Y241 93 aa11.28□□□□□ -0.6
CDK3-201ENST00000425876 TRAV5A0A0B4J249 113 aa11.28□□□□□ -0.6
CDK3-201ENST00000425876 TRAV41A0A0B4J266 112 aa11.28□□□□□ -0.6
CDK3-201ENST00000425876 SH2D7A6NKC9 451 aaPredicted RBP11.28□□□□□ -0.6
CDK3-201ENST00000425876 TEX29Q8N6K0 151 aa11.28□□□□□ -0.6
CDK3-201ENST00000425876 UHRF2Q96PU4 802 aa11.28□□□□□ -0.6
CDK3-201ENST00000425876 ATP6V0BQ99437 205 aa11.28□□□□□ -0.6
CDK3-201ENST00000425876 FOXC2Q99958 501 aa11.28□□□□□ -0.6
CDK3-201ENST00000425876 PAXXQ9BUH6 204 aa11.28□□□□□ -0.6
CDK3-201ENST00000425876 PARLQ9H300 379 aa11.28□□□□□ -0.6
CDK3-201ENST00000425876 OR51M1Q9H341 326 aa11.28□□□□□ -0.6
CDK3-201ENST00000425876 TUBA4BQ9H853 241 aa11.28□□□□□ -0.6
CDK3-201ENST00000425876 RPS10P5Q9NQ39 176 aa11.28□□□□□ -0.6
CDK3-201ENST00000425876 GAR1Q9NY12 217 aaKnown RBP11.28□□□□□ -0.6
CDK3-201ENST00000425876 NAT8Q9UHE5 227 aa11.28□□□□□ -0.6
CDK3-201ENST00000425876 ZNF580Q9UK33 172 aa11.28□□□□□ -0.6
CDK3-201ENST00000425876 ZANQ9Y493 2812 aa11.28□□□□□ -0.6
CDK3-201ENST00000425876 A0A087WWC5 75 aa11.27□□□□□ -0.61
CDK3-201ENST00000425876 WI2-2373I1.2A0A1W2PRP0 233 aa11.27□□□□□ -0.61
CDK3-201ENST00000425876 G3V318 75 aa11.27□□□□□ -0.61
CDK3-201ENST00000425876 OR2C1O95371 312 aa11.27□□□□□ -0.61
CDK3-201ENST00000425876 NPPCP23582 126 aa11.27□□□□□ -0.61
CDK3-201ENST00000425876 RHOGP84095 191 aa11.27□□□□□ -0.61
CDK3-201ENST00000425876 Q56UQ5 140 aa11.27□□□□□ -0.61
CDK3-201ENST00000425876 S100A7AQ86SG5 101 aa11.27□□□□□ -0.61
CDK3-201ENST00000425876 BCL6BQ8N143 479 aaPredicted RBP11.27□□□□□ -0.61
CDK3-201ENST00000425876 ZNF491Q8N8L2 437 aa11.27□□□□□ -0.61
CDK3-201ENST00000425876 ZNF502Q8TBZ5 544 aa11.27□□□□□ -0.61
CDK3-201ENST00000425876 C11orf52Q96A22 123 aa11.27□□□□□ -0.61
CDK3-201ENST00000425876 RPUSD4Q96CM3 377 aaKnown RBP11.27□□□□□ -0.61
CDK3-201ENST00000425876 C20orf24Q9BUV8 137 aa11.27□□□□□ -0.61
CDK3-201ENST00000425876 CELSR1Q9NYQ6 3014 aa11.27□□□□□ -0.61
CDK3-201ENST00000425876 H3BUA1 57 aa11.26□□□□□ -0.61
CDK3-201ENST00000425876 IER3P46695 156 aa11.26□□□□□ -0.61
CDK3-201ENST00000425876 LYZP61626 148 aa11.26□□□□□ -0.61
CDK3-201ENST00000425876 UBE2L3P68036 154 aaKnown RBP11.26□□□□□ -0.61
CDK3-201ENST00000425876 TMEM241Q24JQ0 296 aa11.26□□□□□ -0.61
CDK3-201ENST00000425876 C15orf32Q32M92 178 aa11.26□□□□□ -0.61
CDK3-201ENST00000425876 TMEM88Q6PEY1 159 aa11.26□□□□□ -0.61
CDK3-201ENST00000425876 CBLN2Q8IUK8 224 aa11.26□□□□□ -0.61
CDK3-201ENST00000425876 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.26□□□□□ -0.61
CDK3-201ENST00000425876 WFDC11Q8NEX6 87 aa11.26□□□□□ -0.61
CDK3-201ENST00000425876 Q8WTZ3 238 aa11.26□□□□□ -0.61
CDK3-201ENST00000425876 PRDM13Q9H4Q3 707 aa11.26□□□□□ -0.61
CDK3-201ENST00000425876 MDFIC2A0A1B0GVS7 189 aa11.25□□□□□ -0.61
CDK3-201ENST00000425876 CTSGP08311 255 aa11.25□□□□□ -0.61
CDK3-201ENST00000425876 FXYD5Q96DB9 178 aa11.25□□□□□ -0.61
CDK3-201ENST00000425876 RNF125Q96EQ8 232 aa11.25□□□□□ -0.61
CDK3-201ENST00000425876 TMEM14CQ9P0S9 112 aa11.25□□□□□ -0.61
CDK3-201ENST00000425876 TRBV7-1A0A0A6YYK4 115 aa11.24□□□□□ -0.61
CDK3-201ENST00000425876 FAM223BA6NKX1 122 aa11.24□□□□□ -0.61
CDK3-201ENST00000425876 AP4M1O00189 453 aa11.24□□□□□ -0.61
CDK3-201ENST00000425876 NUPL2O15504 423 aaKnown RBP11.24□□□□□ -0.61
CDK3-201ENST00000425876 NDUFB4O95168 129 aa11.24□□□□□ -0.61
CDK3-201ENST00000425876 IGHV4-59P01825 116 aa11.24□□□□□ -0.61
CDK3-201ENST00000425876 OR10J4P0C629 311 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms