RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 RABAC1Q9UI14 185 aa13.47□□□□□ -0.25
SMARCAL1-205ENST00000425815 IGKV1OR2-108A0A075B7D4 117 aa13.46□□□□□ -0.25
SMARCAL1-205ENST00000425815 WRBO00258 174 aa13.46□□□□□ -0.25
SMARCAL1-205ENST00000425815 BUB3O43684 328 aa13.46□□□□□ -0.25
SMARCAL1-205ENST00000425815 MED6O75586 246 aa13.46□□□□□ -0.25
SMARCAL1-205ENST00000425815 LYG2Q86SG7 212 aa13.46□□□□□ -0.25
SMARCAL1-205ENST00000425815 STXBP6Q8NFX7 210 aa13.46□□□□□ -0.25
SMARCAL1-205ENST00000425815 OR51G1Q8NGK1 321 aa13.46□□□□□ -0.25
SMARCAL1-205ENST00000425815 DNAH1Q9P2D7 4330 aa13.45□□□□□ -0.26
SMARCAL1-205ENST00000425815 CENPXA8MT69 81 aa13.45□□□□□ -0.26
SMARCAL1-205ENST00000425815 OR4D5Q8NGN0 318 aa13.45□□□□□ -0.26
SMARCAL1-205ENST00000425815 NARS2Q96I59 477 aaKnown RBP13.45□□□□□ -0.26
SMARCAL1-205ENST00000425815 HYDINQ4G0P3 5121 aa13.44□□□□□ -0.26
SMARCAL1-205ENST00000425815 A0A0J9YWU9 116 aa13.44□□□□□ -0.26
SMARCAL1-205ENST00000425815 ZFP92A6NM28 416 aa13.44□□□□□ -0.26
SMARCAL1-205ENST00000425815 POLR2GP62487 172 aaKnown RBP eCLIP13.44□□□□□ -0.26
SMARCAL1-205ENST00000425815 RAB11AP62491 216 aa13.44□□□□□ -0.26
SMARCAL1-205ENST00000425815 COQ8AQ8NI60 647 aa13.44□□□□□ -0.26
SMARCAL1-205ENST00000425815 IL17DQ8TAD2 202 aa13.44□□□□□ -0.26
SMARCAL1-205ENST00000425815 RNF125Q96EQ8 232 aa13.44□□□□□ -0.26
SMARCAL1-205ENST00000425815 GRAMD2BQ96HH9 432 aa13.44□□□□□ -0.26
SMARCAL1-205ENST00000425815 SLC35E1Q96K37 410 aa13.44□□□□□ -0.26
SMARCAL1-205ENST00000425815 CIB3Q96Q77 187 aaPredicted RBP13.44□□□□□ -0.26
SMARCAL1-205ENST00000425815 LCE6AA0A183 80 aa13.43□□□□□ -0.26
SMARCAL1-205ENST00000425815 GIG44P09565 113 aaPredicted RBP13.43□□□□□ -0.26
SMARCAL1-205ENST00000425815 ZNF688P0C7X2 276 aa13.43□□□□□ -0.26
SMARCAL1-205ENST00000425815 SPANXN5Q5MJ07 72 aa13.43□□□□□ -0.26
SMARCAL1-205ENST00000425815 THAP8Q8NA92 274 aa13.43□□□□□ -0.26
SMARCAL1-205ENST00000425815 TRGV9Q99603 122 aa13.43□□□□□ -0.26
SMARCAL1-205ENST00000425815 PAIP2BQ9ULR5 123 aaKnown RBP13.43□□□□□ -0.26
SMARCAL1-205ENST00000425815 HELTA6NFD8 242 aa13.42□□□□□ -0.26
SMARCAL1-205ENST00000425815 KNCNA6PVL3 124 aa13.42□□□□□ -0.26
SMARCAL1-205ENST00000425815 LYRM1O43325 122 aa13.42□□□□□ -0.26
SMARCAL1-205ENST00000425815 PAX9P55771 341 aa13.42□□□□□ -0.26
SMARCAL1-205ENST00000425815 C4orf46Q504U0 113 aa13.42□□□□□ -0.26
SMARCAL1-205ENST00000425815 MITD1Q8WV92 249 aa13.42□□□□□ -0.26
SMARCAL1-205ENST00000425815 PMS2P5A8MQ11 134 aa13.41□□□□□ -0.26
SMARCAL1-205ENST00000425815 H3BP45 60 aa13.41□□□□□ -0.26
SMARCAL1-205ENST00000425815 EIF2B2P49770 351 aaKnown RBP13.41□□□□□ -0.26
SMARCAL1-205ENST00000425815 AP2S1P53680 142 aaPredicted RBP13.41□□□□□ -0.26
SMARCAL1-205ENST00000425815 RPP30P78346 268 aaKnown RBP13.41□□□□□ -0.26
SMARCAL1-205ENST00000425815 OR2F1Q13607 317 aa13.41□□□□□ -0.26
SMARCAL1-205ENST00000425815 TMEM182Q6ZP80 229 aaPredicted RBP13.41□□□□□ -0.26
SMARCAL1-205ENST00000425815 TRPT1Q86TN4 253 aaKnown RBP13.41□□□□□ -0.26
SMARCAL1-205ENST00000425815 PBDC1Q9BVG4 233 aa13.41□□□□□ -0.26
SMARCAL1-205ENST00000425815 A6NHS1 94 aa13.4□□□□□ -0.26
SMARCAL1-205ENST00000425815 SNRPGP15A8MWD9 76 aa13.4□□□□□ -0.26
SMARCAL1-205ENST00000425815 IFNA21P01568 189 aa13.4□□□□□ -0.26
SMARCAL1-205ENST00000425815 TCRBP04435 133 aa13.4□□□□□ -0.26
SMARCAL1-205ENST00000425815 NKX2-1P43699 371 aaPredicted RBP13.4□□□□□ -0.26
SMARCAL1-205ENST00000425815 CNPY1Q3B7I2 92 aa13.4□□□□□ -0.26
SMARCAL1-205ENST00000425815 OR8G2PQ6IF36 304 aa13.4□□□□□ -0.26
SMARCAL1-205ENST00000425815 SIGLEC15Q6ZMC9 328 aa13.4□□□□□ -0.26
SMARCAL1-205ENST00000425815 RAB40CQ96S21 281 aa13.4□□□□□ -0.26
SMARCAL1-205ENST00000425815 C20orf85Q9H1P6 137 aa13.4□□□□□ -0.26
SMARCAL1-205ENST00000425815 STRAPQ9Y3F4 350 aaKnown RBP13.4□□□□□ -0.26
SMARCAL1-205ENST00000425815 CA1P00915 261 aaPredicted RBP13.39□□□□□ -0.27
SMARCAL1-205ENST00000425815 GSG1LQ6UXU4 331 aa13.39□□□□□ -0.27
SMARCAL1-205ENST00000425815 STHQ8IWL8 128 aa13.39□□□□□ -0.27
SMARCAL1-205ENST00000425815 GATAD1Q8WUU5 269 aa13.39□□□□□ -0.27
SMARCAL1-205ENST00000425815 SMIM8Q96KF7 97 aa13.39□□□□□ -0.27
SMARCAL1-205ENST00000425815 NRN1Q9NPD7 142 aa13.39□□□□□ -0.27
SMARCAL1-205ENST00000425815 PSENENQ9NZ42 101 aa13.39□□□□□ -0.27
SMARCAL1-205ENST00000425815 CCNKO75909 580 aa13.38□□□□□ -0.27
SMARCAL1-205ENST00000425815 ATF4P18848 351 aaPredicted RBP13.38□□□□□ -0.27
SMARCAL1-205ENST00000425815 GATA2P23769 480 aaPredicted RBP13.38□□□□□ -0.27
SMARCAL1-205ENST00000425815 LYZP61626 148 aa13.38□□□□□ -0.27
SMARCAL1-205ENST00000425815 IAH1Q2TAA2 248 aaPredicted RBP13.38□□□□□ -0.27
SMARCAL1-205ENST00000425815 PSMG4Q5JS54 123 aa13.38□□□□□ -0.27
SMARCAL1-205ENST00000425815 LINC00299Q6ZSB3 139 aa13.38□□□□□ -0.27
SMARCAL1-205ENST00000425815 ZBTB8BQ8NAP8 495 aaPredicted RBP13.38□□□□□ -0.27
SMARCAL1-205ENST00000425815 RARRES2Q99969 163 aa13.38□□□□□ -0.27
SMARCAL1-205ENST00000425815 CCDC32Q9BV29 185 aa13.38□□□□□ -0.27
SMARCAL1-205ENST00000425815 SEPSECSQ9HD40 501 aaKnown RBP13.38□□□□□ -0.27
SMARCAL1-205ENST00000425815 SSSCA1O60232 199 aa13.37□□□□□ -0.27
SMARCAL1-205ENST00000425815 ACTL10Q5JWF8 245 aa13.37□□□□□ -0.27
SMARCAL1-205ENST00000425815 TMEM14EPQ6UXP3 125 aa13.37□□□□□ -0.27
SMARCAL1-205ENST00000425815 ACOT7LQ6ZUV0 252 aa13.37□□□□□ -0.27
SMARCAL1-205ENST00000425815 OR11H2Q8NH07 326 aa13.37□□□□□ -0.27
SMARCAL1-205ENST00000425815 C17orf77Q96MU5 243 aa13.37□□□□□ -0.27
SMARCAL1-205ENST00000425815 WDR12Q9GZL7 423 aaKnown RBP13.37□□□□□ -0.27
SMARCAL1-205ENST00000425815 TBC1D24Q9ULP9 559 aa13.37□□□□□ -0.27
SMARCAL1-205ENST00000425815 TRAV6A0A075B6T7 132 aa13.36□□□□□ -0.27
SMARCAL1-205ENST00000425815 FABP1P07148 127 aa13.36□□□□□ -0.27
SMARCAL1-205ENST00000425815 C4BPBP20851 252 aa13.36□□□□□ -0.27
SMARCAL1-205ENST00000425815 C1orf194Q5T5A4 169 aa13.36□□□□□ -0.27
SMARCAL1-205ENST00000425815 TMEM144Q7Z5S9 345 aa13.36□□□□□ -0.27
SMARCAL1-205ENST00000425815 SEC22CQ9BRL7 303 aa13.36□□□□□ -0.27
SMARCAL1-205ENST00000425815 GSKIPQ9P0R6 139 aa13.36□□□□□ -0.27
SMARCAL1-205ENST00000425815 RCL1Q9Y2P8 373 aaKnown RBP13.36□□□□□ -0.27
SMARCAL1-205ENST00000425815 SOCS3O14543 225 aa13.35□□□□□ -0.27
SMARCAL1-205ENST00000425815 CCSO14618 274 aa13.35□□□□□ -0.27
SMARCAL1-205ENST00000425815 MBPP02686 304 aaPredicted RBP13.35□□□□□ -0.27
SMARCAL1-205ENST00000425815 NUDT15Q9NV35 164 aa13.35□□□□□ -0.27
SMARCAL1-205ENST00000425815 H3BMM0 161 aa13.34□□□□□ -0.27
SMARCAL1-205ENST00000425815 NUP62P37198 522 aaPredicted RBP13.34□□□□□ -0.27
SMARCAL1-205ENST00000425815 DEFB1P60022 68 aa13.34□□□□□ -0.27
SMARCAL1-205ENST00000425815 ARL16Q0P5N6 197 aa13.34□□□□□ -0.27
SMARCAL1-205ENST00000425815 PMS2P11Q13670 270 aa13.34□□□□□ -0.27
SMARCAL1-205ENST00000425815 CSNK1G2-AS1Q8NCQ2 148 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms