RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 C1orf194Q5T5A4 169 aa8.78□□□□□ -1
HLA-DQB3-203ENST00000425319 FAM222AQ5U5X8 452 aa8.78□□□□□ -1
HLA-DQB3-203ENST00000425319 Q6ZRM9 215 aa8.78□□□□□ -1
HLA-DQB3-203ENST00000425319 SCGB3A2Q96PL1 93 aa8.78□□□□□ -1
HLA-DQB3-203ENST00000425319 SAV1Q9H4B6 383 aaPredicted RBP8.78□□□□□ -1
HLA-DQB3-203ENST00000425319 RPRMQ9NS64 109 aa8.78□□□□□ -1
HLA-DQB3-203ENST00000425319 DKK2Q9UBU2 259 aa8.78□□□□□ -1
HLA-DQB3-203ENST00000425319 LOC102723971A0A1B0GUV8 181 aa8.77□□□□□ -1.01
HLA-DQB3-203ENST00000425319 ZNF705FA8MVS1 300 aaPredicted RBP8.77□□□□□ -1.01
HLA-DQB3-203ENST00000425319 DISC1C4P0D8 188 aa8.77□□□□□ -1.01
HLA-DQB3-203ENST00000425319 ATP6V1G2O95670 118 aa8.77□□□□□ -1.01
HLA-DQB3-203ENST00000425319 CDS2O95674 445 aa8.77□□□□□ -1.01
HLA-DQB3-203ENST00000425319 CFDP00746 253 aaPredicted RBP8.77□□□□□ -1.01
HLA-DQB3-203ENST00000425319 CD74P04233 296 aa8.77□□□□□ -1.01
HLA-DQB3-203ENST00000425319 CD3DP04234 171 aa8.77□□□□□ -1.01
HLA-DQB3-203ENST00000425319 ZNF705DP0CH99 300 aaPredicted RBP8.77□□□□□ -1.01
HLA-DQB3-203ENST00000425319 ZNF705BP0CI00 300 aaPredicted RBP8.77□□□□□ -1.01
HLA-DQB3-203ENST00000425319 PSG1P11464 419 aa8.77□□□□□ -1.01
HLA-DQB3-203ENST00000425319 PSMB3P49720 205 aa8.77□□□□□ -1.01
HLA-DQB3-203ENST00000425319 MEOX2P50222 304 aa8.77□□□□□ -1.01
HLA-DQB3-203ENST00000425319 LHFPL1Q86WI0 220 aa8.77□□□□□ -1.01
HLA-DQB3-203ENST00000425319 OR8I2Q8N0Y5 310 aa8.77□□□□□ -1.01
HLA-DQB3-203ENST00000425319 RNF125Q96EQ8 232 aa8.77□□□□□ -1.01
HLA-DQB3-203ENST00000425319 SLC35E1Q96K37 410 aa8.77□□□□□ -1.01
HLA-DQB3-203ENST00000425319 TMEM222Q9H0R3 208 aa8.77□□□□□ -1.01
HLA-DQB3-203ENST00000425319 MRPL36Q9P0J6 103 aaKnown RBP8.77□□□□□ -1.01
HLA-DQB3-203ENST00000425319 HPGDSO60760 199 aa8.76□□□□□ -1.01
HLA-DQB3-203ENST00000425319 P0C879 139 aa8.76□□□□□ -1.01
HLA-DQB3-203ENST00000425319 ELK1P19419 428 aa8.76□□□□□ -1.01
HLA-DQB3-203ENST00000425319 CCL18P55774 89 aa8.76□□□□□ -1.01
HLA-DQB3-203ENST00000425319 FXYD7P58549 80 aa8.76□□□□□ -1.01
HLA-DQB3-203ENST00000425319 MEF2DQ14814 521 aa8.76□□□□□ -1.01
HLA-DQB3-203ENST00000425319 SURF2Q15527 256 aaPredicted RBP8.76□□□□□ -1.01
HLA-DQB3-203ENST00000425319 USF2Q15853 346 aaPredicted RBP8.76□□□□□ -1.01
HLA-DQB3-203ENST00000425319 RNASE12Q5GAN4 147 aaKnown RBP8.76□□□□□ -1.01
HLA-DQB3-203ENST00000425319 TMEM229BQ8NBD8 167 aa8.76□□□□□ -1.01
HLA-DQB3-203ENST00000425319 CACNG5Q9UF02 275 aa8.76□□□□□ -1.01
HLA-DQB3-203ENST00000425319 YTHDF2Q9Y5A9 579 aaKnown RBP8.76□□□□□ -1.01
HLA-DQB3-203ENST00000425319 C16orf90A8MZG2 172 aa8.75□□□□□ -1.01
HLA-DQB3-203ENST00000425319 ISLRO14498 428 aa8.75□□□□□ -1.01
HLA-DQB3-203ENST00000425319 DUSP14O95147 198 aaKnown RBP8.75□□□□□ -1.01
HLA-DQB3-203ENST00000425319 OR5AC1P0C628 307 aa8.75□□□□□ -1.01
HLA-DQB3-203ENST00000425319 SULT1A3P0DMM9 295 aa8.75□□□□□ -1.01
HLA-DQB3-203ENST00000425319 SULT1A4P0DMN0 295 aa8.75□□□□□ -1.01
HLA-DQB3-203ENST00000425319 GPX4P36969 197 aaPredicted RBP8.75□□□□□ -1.01
HLA-DQB3-203ENST00000425319 GALR1P47211 349 aa8.75□□□□□ -1.01
HLA-DQB3-203ENST00000425319 RAB11AP62491 216 aa8.75□□□□□ -1.01
HLA-DQB3-203ENST00000425319 RPP30P78346 268 aaKnown RBP8.75□□□□□ -1.01
HLA-DQB3-203ENST00000425319 MRPS10P82664 201 aaKnown RBP8.75□□□□□ -1.01
HLA-DQB3-203ENST00000425319 TMEM268Q5VZI3 342 aa8.75□□□□□ -1.01
HLA-DQB3-203ENST00000425319 STEAP1BQ6NZ63 245 aa8.75□□□□□ -1.01
HLA-DQB3-203ENST00000425319 Q6ZR54 194 aa8.75□□□□□ -1.01
HLA-DQB3-203ENST00000425319 LGI3Q8N145 548 aa8.75□□□□□ -1.01
HLA-DQB3-203ENST00000425319 OR13C8Q8NGS7 320 aa8.75□□□□□ -1.01
HLA-DQB3-203ENST00000425319 MARCH1Q8TCQ1 289 aa8.75□□□□□ -1.01
HLA-DQB3-203ENST00000425319 C16orf92Q96LL3 132 aa8.75□□□□□ -1.01
HLA-DQB3-203ENST00000425319 PPP1R14DQ9NXH3 145 aa8.75□□□□□ -1.01
HLA-DQB3-203ENST00000425319 MTFP1Q9UDX5 166 aa8.75□□□□□ -1.01
HLA-DQB3-203ENST00000425319 HERC2O95714 4834 aa8.74□□□□□ -1.01
HLA-DQB3-203ENST00000425319 ANXA3P12429 323 aa8.74□□□□□ -1.01
HLA-DQB3-203ENST00000425319 AKR1C4P17516 323 aa8.74□□□□□ -1.01
HLA-DQB3-203ENST00000425319 TGFBR1P36897 503 aa8.74□□□□□ -1.01
HLA-DQB3-203ENST00000425319 ALDH3B2P48448 385 aa8.74□□□□□ -1.01
HLA-DQB3-203ENST00000425319 CCR6P51684 374 aa8.74□□□□□ -1.01
HLA-DQB3-203ENST00000425319 SUPT4H1P63272 117 aaKnown RBP8.74□□□□□ -1.01
HLA-DQB3-203ENST00000425319 SSBP1Q04837 148 aaKnown RBP8.74□□□□□ -1.01
HLA-DQB3-203ENST00000425319 CLINT1Q14677 625 aa8.74□□□□□ -1.01
HLA-DQB3-203ENST00000425319 AARDQ4LEZ3 155 aa8.74□□□□□ -1.01
HLA-DQB3-203ENST00000425319 GGNBP1Q5YKI7 109 aa8.74□□□□□ -1.01
HLA-DQB3-203ENST00000425319 S100A7AQ86SG5 101 aa8.74□□□□□ -1.01
HLA-DQB3-203ENST00000425319 SELENOHQ8IZQ5 122 aaKnown RBP8.74□□□□□ -1.01
HLA-DQB3-203ENST00000425319 OR52I2Q8NH67 350 aa8.74□□□□□ -1.01
HLA-DQB3-203ENST00000425319 GPR146Q96CH1 333 aa8.74□□□□□ -1.01
HLA-DQB3-203ENST00000425319 YIPF6Q96EC8 236 aa8.74□□□□□ -1.01
HLA-DQB3-203ENST00000425319 NAA60Q9H7X0 242 aa8.74□□□□□ -1.01
HLA-DQB3-203ENST00000425319 EXTL2Q9UBQ6 330 aa8.74□□□□□ -1.01
HLA-DQB3-203ENST00000425319 LYRM9A8MSI8 78 aa8.73□□□□□ -1.01
HLA-DQB3-203ENST00000425319 ZNF182P17025 639 aaPredicted RBP8.73□□□□□ -1.01
HLA-DQB3-203ENST00000425319 LYZP61626 148 aa8.73□□□□□ -1.01
HLA-DQB3-203ENST00000425319 FAM78BQ5VT40 261 aa8.73□□□□□ -1.01
HLA-DQB3-203ENST00000425319 GPR107Q5VW38 600 aa8.73□□□□□ -1.01
HLA-DQB3-203ENST00000425319 TMEM88Q6PEY1 159 aa8.73□□□□□ -1.01
HLA-DQB3-203ENST00000425319 GPR141Q7Z602 305 aa8.73□□□□□ -1.01
HLA-DQB3-203ENST00000425319 GLYATL2Q8WU03 294 aa8.73□□□□□ -1.01
HLA-DQB3-203ENST00000425319 IL22RA2Q969J5 263 aa8.73□□□□□ -1.01
HLA-DQB3-203ENST00000425319 GPR82Q96P67 336 aa8.73□□□□□ -1.01
HLA-DQB3-203ENST00000425319 KMT2AQ03164 3969 aa8.72□□□□□ -1.01
HLA-DQB3-203ENST00000425319 A0A0G2JRQ6 117 aa8.72□□□□□ -1.01
HLA-DQB3-203ENST00000425319 CDK2AP2O75956 126 aa8.72□□□□□ -1.01
HLA-DQB3-203ENST00000425319 PAX9P55771 341 aa8.72□□□□□ -1.01
HLA-DQB3-203ENST00000425319 VBP1P61758 197 aa8.72□□□□□ -1.01
HLA-DQB3-203ENST00000425319 SRPXP78539 464 aa8.72□□□□□ -1.01
HLA-DQB3-203ENST00000425319 NMSQ5H8A3 153 aa8.72□□□□□ -1.01
HLA-DQB3-203ENST00000425319 C6orf223Q8N319 242 aa8.72□□□□□ -1.01
HLA-DQB3-203ENST00000425319 DTD1Q8TEA8 209 aa8.72□□□□□ -1.01
HLA-DQB3-203ENST00000425319 IGF2BP2-AS1Q96M15 143 aa8.72□□□□□ -1.01
HLA-DQB3-203ENST00000425319 PRRT1Q99946 306 aa8.72□□□□□ -1.01
HLA-DQB3-203ENST00000425319 SCRT1Q9BWW7 348 aa8.72□□□□□ -1.01
HLA-DQB3-203ENST00000425319 DOK5Q9P104 306 aa8.72□□□□□ -1.01
HLA-DQB3-203ENST00000425319 RABL2AQ9UBK7 228 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms