RNA–Protein interactions for RNA: ENST00000424248.2

DENND3-202, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene DENND3, Length 4,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-202ENST00000424248 FNDC4Q9H6D8 234 aaPredicted RBP11.55□□□□□ -0.56
DENND3-202ENST00000424248 GNG5P63218 68 aa11.55□□□□□ -0.56
DENND3-202ENST00000424248 RRN3P1Q2M238 152 aa11.55□□□□□ -0.56
DENND3-202ENST00000424248 SEPSECSQ9HD40 501 aaKnown RBP11.55□□□□□ -0.56
DENND3-202ENST00000424248 PSG8Q9UQ74 426 aa11.55□□□□□ -0.56
DENND3-202ENST00000424248 A0A0G2JRQ6 117 aa11.55□□□□□ -0.56
DENND3-202ENST00000424248 MEGF9Q9H1U4 602 aa11.55□□□□□ -0.56
DENND3-202ENST00000424248 C15orf62A8K5M9 175 aa11.55□□□□□ -0.56
DENND3-202ENST00000424248 PSPNO60542 156 aa11.55□□□□□ -0.56
DENND3-202ENST00000424248 Q6ZRM9 215 aa11.55□□□□□ -0.56
DENND3-202ENST00000424248 NLRC5Q86WI3 1866 aa11.55□□□□□ -0.56
DENND3-202ENST00000424248 THBDP07204 575 aa11.54□□□□□ -0.56
DENND3-202ENST00000424248 GAGE1Q13065 139 aa11.54□□□□□ -0.56
DENND3-202ENST00000424248 C8orf46Q8TAG6 207 aa11.54□□□□□ -0.56
DENND3-202ENST00000424248 YPEL3P61236 119 aaPredicted RBP11.54□□□□□ -0.56
DENND3-202ENST00000424248 Q6P435 159 aa11.54□□□□□ -0.56
DENND3-202ENST00000424248 CD5LO43866 347 aa11.54□□□□□ -0.56
DENND3-202ENST00000424248 MMP23AO75900 390 aa11.54□□□□□ -0.56
DENND3-202ENST00000424248 C7orf69Q9H7B7 122 aa11.54□□□□□ -0.56
DENND3-202ENST00000424248 LRRK1Q38SD2 2015 aa11.54□□□□□ -0.56
DENND3-202ENST00000424248 NHP2Q9NX24 153 aaKnown RBP11.54□□□□□ -0.56
DENND3-202ENST00000424248 IGHV3OR16-10A0A075B7F0 116 aa11.53□□□□□ -0.56
DENND3-202ENST00000424248 CACNG7P62955 275 aa11.53□□□□□ -0.56
DENND3-202ENST00000424248 SLC50A1Q9BRV3 221 aa11.53□□□□□ -0.56
DENND3-202ENST00000424248 PLXNA4Q9HCM2 1894 aa11.53□□□□□ -0.56
DENND3-202ENST00000424248 TMEM262E9PQX1 116 aa11.53□□□□□ -0.56
DENND3-202ENST00000424248 TMEM50AO95807 157 aa11.53□□□□□ -0.56
DENND3-202ENST00000424248 Q6ZS92 163 aa11.53□□□□□ -0.56
DENND3-202ENST00000424248 DUX5Q96PT3 197 aa11.53□□□□□ -0.56
DENND3-202ENST00000424248 CACNA1HO95180 2353 aa11.53□□□□□ -0.56
DENND3-202ENST00000424248 F2Z2F3 143 aa11.53□□□□□ -0.56
DENND3-202ENST00000424248 LEPP41159 167 aa11.53□□□□□ -0.56
DENND3-202ENST00000424248 ASIPP42127 132 aa11.53□□□□□ -0.56
DENND3-202ENST00000424248 NUP37Q8NFH4 326 aa11.53□□□□□ -0.56
DENND3-202ENST00000424248 COQ2Q96H96 371 aa11.53□□□□□ -0.56
DENND3-202ENST00000424248 RNF5Q99942 180 aa11.53□□□□□ -0.56
DENND3-202ENST00000424248 COX11Q9Y6N1 276 aa11.53□□□□□ -0.56
DENND3-202ENST00000424248 SYS1-DBNDD2H3BUS1 97 aa11.52□□□□□ -0.56
DENND3-202ENST00000424248 RNF125Q96EQ8 232 aa11.52□□□□□ -0.56
DENND3-202ENST00000424248 C19orf54Q5BKX5 351 aa11.52□□□□□ -0.56
DENND3-202ENST00000424248 ZCCHC24Q8N2G6 241 aaKnown RBP11.52□□□□□ -0.56
DENND3-202ENST00000424248 MBNL3Q9NUK0 354 aaKnown RBP11.52□□□□□ -0.56
DENND3-202ENST00000424248 NTF4P34130 210 aa11.52□□□□□ -0.57
DENND3-202ENST00000424248 PAX9P55771 341 aa11.52□□□□□ -0.57
DENND3-202ENST00000424248 ZNF585BQ52M93 769 aa11.52□□□□□ -0.57
DENND3-202ENST00000424248 TMEM170BQ5T4T1 132 aa11.52□□□□□ -0.57
DENND3-202ENST00000424248 SPATA31B1PQ5VZV4 182 aa11.52□□□□□ -0.57
DENND3-202ENST00000424248 RPRMLQ8N4K4 120 aa11.52□□□□□ -0.57
DENND3-202ENST00000424248 IGHV3OR16-13A0A075B7E8 117 aa11.52□□□□□ -0.57
DENND3-202ENST00000424248 IGHV3-74A0A0B4J1X5 117 aa11.52□□□□□ -0.57
DENND3-202ENST00000424248 OOSP1A8MZH6 123 aa11.51□□□□□ -0.57
DENND3-202ENST00000424248 H7C1H1 209 aa11.51□□□□□ -0.57
DENND3-202ENST00000424248 MPV17L2Q567V2 206 aa11.51□□□□□ -0.57
DENND3-202ENST00000424248 SAMD5Q5TGI4 173 aa11.51□□□□□ -0.57
DENND3-202ENST00000424248 NUP35Q8NFH5 326 aa11.51□□□□□ -0.57
DENND3-202ENST00000424248 CDKN1AP38936 164 aa11.51□□□□□ -0.57
DENND3-202ENST00000424248 SRSF1Q07955 248 aaKnown RBP eCLIP11.51□□□□□ -0.57
DENND3-202ENST00000424248 ORMDL2Q53FV1 153 aa11.51□□□□□ -0.57
DENND3-202ENST00000424248 COLCA1Q6ZS62 124 aa11.51□□□□□ -0.57
DENND3-202ENST00000424248 HEATR5AQ86XA9 2040 aa11.51□□□□□ -0.57
DENND3-202ENST00000424248 ITGB1BP1O14713 200 aa11.51□□□□□ -0.57
DENND3-202ENST00000424248 TFF1P04155 84 aa11.51□□□□□ -0.57
DENND3-202ENST00000424248 ZNF479Q96JC4 524 aa11.51□□□□□ -0.57
DENND3-202ENST00000424248 TRGV9Q99603 122 aa11.51□□□□□ -0.57
DENND3-202ENST00000424248 TMEM178BH3BS89 294 aa11.5□□□□□ -0.57
DENND3-202ENST00000424248 IGKCP01834 107 aa11.5□□□□□ -0.57
DENND3-202ENST00000424248 CLEC19AQ6UXS0 136 aa11.5□□□□□ -0.57
DENND3-202ENST00000424248 CD177Q8N6Q3 437 aa11.5□□□□□ -0.57
DENND3-202ENST00000424248 ZNF672Q499Z4 452 aaPredicted RBP11.5□□□□□ -0.57
DENND3-202ENST00000424248 COA6Q5JTJ3 125 aaKnown RBP11.5□□□□□ -0.57
DENND3-202ENST00000424248 S4R3C0 116 aa11.5□□□□□ -0.57
DENND3-202ENST00000424248 PHF3Q92576 2039 aaKnown RBP11.5□□□□□ -0.57
DENND3-202ENST00000424248 UBE2L6O14933 153 aa11.5□□□□□ -0.57
DENND3-202ENST00000424248 IGKV3-15P01624 115 aa11.5□□□□□ -0.57
DENND3-202ENST00000424248 TCRAP04437 139 aa11.5□□□□□ -0.57
DENND3-202ENST00000424248 TIMM23O14925 209 aa11.5□□□□□ -0.57
DENND3-202ENST00000424248 ZNF56Q15929 161 aa11.5□□□□□ -0.57
DENND3-202ENST00000424248 LCN12Q6JVE5 192 aa11.5□□□□□ -0.57
DENND3-202ENST00000424248 TMEM167AQ8TBQ9 72 aa11.5□□□□□ -0.57
DENND3-202ENST00000424248 ZNF418Q8TF45 676 aaPredicted RBP11.5□□□□□ -0.57
DENND3-202ENST00000424248 FAM231BA6NCW3 169 aa11.49□□□□□ -0.57
DENND3-202ENST00000424248 CEACAM4O75871 244 aa11.49□□□□□ -0.57
DENND3-202ENST00000424248 IGHV3-23P01764 117 aa11.49□□□□□ -0.57
DENND3-202ENST00000424248 GFRA4Q9GZZ7 299 aa11.49□□□□□ -0.57
DENND3-202ENST00000424248 GEMIN7Q9H840 131 aaKnown RBP11.49□□□□□ -0.57
DENND3-202ENST00000424248 FANCMQ8IYD8 2048 aa11.49□□□□□ -0.57
DENND3-202ENST00000424248 PAX1P15863 534 aa11.49□□□□□ -0.57
DENND3-202ENST00000424248 EMP1P54849 157 aa11.49□□□□□ -0.57
DENND3-202ENST00000424248 ZNF581Q9P0T4 197 aa11.49□□□□□ -0.57
DENND3-202ENST00000424248 IGHV1-8P0DP01 117 aa11.49□□□□□ -0.57
DENND3-202ENST00000424248 MYOD1P15172 320 aa11.49□□□□□ -0.57
DENND3-202ENST00000424248 CRIM1Q9NZV1 1036 aa11.49□□□□□ -0.57
DENND3-202ENST00000424248 IGKV1-6A0A0C4DH72 117 aa11.48□□□□□ -0.57
DENND3-202ENST00000424248 LINC00473A8K010 186 aa11.48□□□□□ -0.57
DENND3-202ENST00000424248 CACNA1GO43497 2377 aa11.48□□□□□ -0.57
DENND3-202ENST00000424248 IGHV2-26A0A0B4J1V2 119 aa11.48□□□□□ -0.57
DENND3-202ENST00000424248 M0R381 172 aa11.48□□□□□ -0.57
DENND3-202ENST00000424248 PRSS8Q16651 343 aa11.48□□□□□ -0.57
DENND3-202ENST00000424248 IGHV3-49A0A0A0MS15 119 aa11.48□□□□□ -0.57
DENND3-202ENST00000424248 TRAV5A0A0B4J249 113 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms