RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 C1orf137Q5JT78 98 aa0.84□□□□□ -2.27
LINC00397-201ENST00000422074 FAM74A1Q5RGS3 127 aa0.84□□□□□ -2.27
LINC00397-201ENST00000422074 GDF5OSQ5U4N7 250 aa0.84□□□□□ -2.27
LINC00397-201ENST00000422074 C3orf56Q8N813 242 aa0.84□□□□□ -2.27
LINC00397-201ENST00000422074 SLC30A7Q8NEW0 376 aa0.84□□□□□ -2.27
LINC00397-201ENST00000422074 TMEM254Q8TBM7 123 aa0.84□□□□□ -2.27
LINC00397-201ENST00000422074 SLAMF6Q96DU3 332 aa0.84□□□□□ -2.27
LINC00397-201ENST00000422074 BCL2L10Q9HD36 194 aa0.84□□□□□ -2.27
LINC00397-201ENST00000422074 CDC42SE1Q9NRR8 79 aa0.84□□□□□ -2.27
LINC00397-201ENST00000422074 KIF1BO60333 1816 aa0.84□□□□□ -2.28
LINC00397-201ENST00000422074 SBF1O95248 1867 aa0.84□□□□□ -2.28
LINC00397-201ENST00000422074 FMN1Q68DA7 1419 aa0.83□□□□□ -2.28
LINC00397-201ENST00000422074 RIMBP3CA6NJZ7 1639 aa0.83□□□□□ -2.28
LINC00397-201ENST00000422074 RIMBP3BA6NNM3 1639 aa0.83□□□□□ -2.28
LINC00397-201ENST00000422074 RIMBP3Q9UFD9 1639 aa0.83□□□□□ -2.28
LINC00397-201ENST00000422074 ZNF736B4DX44 427 aaPredicted RBP0.83□□□□□ -2.28
LINC00397-201ENST00000422074 GADD45GO95257 159 aa0.83□□□□□ -2.28
LINC00397-201ENST00000422074 DNAL4O96015 105 aa0.83□□□□□ -2.28
LINC00397-201ENST00000422074 SERPINA1P01009 418 aa0.83□□□□□ -2.28
LINC00397-201ENST00000422074 S100A6P06703 90 aa0.83□□□□□ -2.28
LINC00397-201ENST00000422074 PIGPP57054 158 aa0.83□□□□□ -2.28
LINC00397-201ENST00000422074 MPV17LQ2QL34 196 aa0.83□□□□□ -2.28
LINC00397-201ENST00000422074 DEFB113Q30KQ7 82 aa0.83□□□□□ -2.28
LINC00397-201ENST00000422074 BCL2L15Q5TBC7 163 aa0.83□□□□□ -2.28
LINC00397-201ENST00000422074 C12orf45Q8N5I9 185 aaPredicted RBP0.83□□□□□ -2.28
LINC00397-201ENST00000422074 BORCS5Q969J3 196 aa0.83□□□□□ -2.28
LINC00397-201ENST00000422074 ADAT3Q96EY9 351 aaPredicted RBP0.83□□□□□ -2.28
LINC00397-201ENST00000422074 PRADC1Q9BSG0 188 aa0.83□□□□□ -2.28
LINC00397-201ENST00000422074 RNF122Q9H9V4 155 aa0.83□□□□□ -2.28
LINC00397-201ENST00000422074 FBN2P35556 2912 aa0.83□□□□□ -2.28
LINC00397-201ENST00000422074 PLXND1Q9Y4D7 1925 aa0.83□□□□□ -2.28
LINC00397-201ENST00000422074 TRGV10A0A0A0MS01 117 aa0.82□□□□□ -2.28
LINC00397-201ENST00000422074 HMGB3O15347 200 aaKnown RBP0.82□□□□□ -2.28
LINC00397-201ENST00000422074 CST8O60676 142 aa0.82□□□□□ -2.28
LINC00397-201ENST00000422074 TIMM17BO60830 172 aa0.82□□□□□ -2.28
LINC00397-201ENST00000422074 SRIP30626 198 aa0.82□□□□□ -2.28
LINC00397-201ENST00000422074 SERPINB9P50453 376 aa0.82□□□□□ -2.28
LINC00397-201ENST00000422074 DYNLT1P63172 113 aa0.82□□□□□ -2.28
LINC00397-201ENST00000422074 FADDQ13158 208 aa0.82□□□□□ -2.28
LINC00397-201ENST00000422074 SOSTDC1Q6X4U4 206 aa0.82□□□□□ -2.28
LINC00397-201ENST00000422074 YPEL2Q96QA6 119 aa0.82□□□□□ -2.28
LINC00397-201ENST00000422074 PHB2Q99623 299 aa0.82□□□□□ -2.28
LINC00397-201ENST00000422074 LINC00467Q9BRT7 94 aa0.82□□□□□ -2.28
LINC00397-201ENST00000422074 ARFGEF3Q5TH69 2177 aa0.81□□□□□ -2.28
LINC00397-201ENST00000422074 DENND4CQ5VZ89 1909 aa0.81□□□□□ -2.28
LINC00397-201ENST00000422074 TRAV4A0A0B4J268 109 aa0.81□□□□□ -2.28
LINC00397-201ENST00000422074 NDUFB3O43676 98 aa0.81□□□□□ -2.28
LINC00397-201ENST00000422074 IFNA7P01567 189 aa0.81□□□□□ -2.28
LINC00397-201ENST00000422074 MYL5Q02045 173 aa0.81□□□□□ -2.28
LINC00397-201ENST00000422074 PRB3Q04118 309 aaPredicted RBP0.81□□□□□ -2.28
LINC00397-201ENST00000422074 TMED2Q15363 201 aa0.81□□□□□ -2.28
LINC00397-201ENST00000422074 ST6GALNAC3Q8NDV1 305 aa0.81□□□□□ -2.28
LINC00397-201ENST00000422074 OR2T35Q8NGX2 323 aa0.81□□□□□ -2.28
LINC00397-201ENST00000422074 PRAP1Q96NZ9 151 aa0.81□□□□□ -2.28
LINC00397-201ENST00000422074 OPTCQ9UBM4 332 aa0.81□□□□□ -2.28
LINC00397-201ENST00000422074 PEAK1Q9H792 1746 aa0.81□□□□□ -2.28
LINC00397-201ENST00000422074 PCF11O94913 1555 aaKnown RBP0.8□□□□□ -2.28
LINC00397-201ENST00000422074 SCN10AQ9Y5Y9 1956 aa0.8□□□□□ -2.28
LINC00397-201ENST00000422074 TRBV19A0A075B6N1 114 aa0.8□□□□□ -2.28
LINC00397-201ENST00000422074 FAM159BA6NKW6 160 aa0.8□□□□□ -2.28
LINC00397-201ENST00000422074 M0R2N4 97 aa0.8□□□□□ -2.28
LINC00397-201ENST00000422074 INE1O15225 51 aa0.8□□□□□ -2.28
LINC00397-201ENST00000422074 IFNA6P05013 189 aa0.8□□□□□ -2.28
LINC00397-201ENST00000422074 CTXN2P0C2S0 81 aa0.8□□□□□ -2.28
LINC00397-201ENST00000422074 ZNF25P17030 456 aaPredicted RBP0.8□□□□□ -2.28
LINC00397-201ENST00000422074 CNBPP62633 177 aaKnown RBP0.8□□□□□ -2.28
LINC00397-201ENST00000422074 TAF1AQ15573 450 aaPredicted RBP0.8□□□□□ -2.28
LINC00397-201ENST00000422074 C2orf82Q6UX34 121 aa0.8□□□□□ -2.28
LINC00397-201ENST00000422074 OR11H6Q8NGC7 330 aa0.8□□□□□ -2.28
LINC00397-201ENST00000422074 OR10X1Q8NGY0 326 aa0.8□□□□□ -2.28
LINC00397-201ENST00000422074 CHMP6Q96FZ7 201 aa0.8□□□□□ -2.28
LINC00397-201ENST00000422074 GPER1Q99527 375 aa0.8□□□□□ -2.28
LINC00397-201ENST00000422074 C9orf16Q9BUW7 83 aa0.8□□□□□ -2.28
LINC00397-201ENST00000422074 IMUPQ9GZP8 106 aa0.8□□□□□ -2.28
LINC00397-201ENST00000422074 TMEM133Q9H2Q1 129 aa0.8□□□□□ -2.28
LINC00397-201ENST00000422074 PARVBQ9HBI1 364 aa0.8□□□□□ -2.28
LINC00397-201ENST00000422074 CEP192Q8TEP8 1941 aa0.79□□□□□ -2.28
LINC00397-201ENST00000422074 EXPH5Q8NEV8 1989 aa0.79□□□□□ -2.28
LINC00397-201ENST00000422074 ARHGEF28Q8N1W1 1705 aaKnown RBP0.79□□□□□ -2.28
LINC00397-201ENST00000422074 LAMB4A4D0S4 1761 aa0.79□□□□□ -2.28
LINC00397-201ENST00000422074 TCRBV4S1A1TA0A5B7 111 aa0.79□□□□□ -2.28
LINC00397-201ENST00000422074 GGCTO75223 188 aaKnown RBP0.79□□□□□ -2.28
LINC00397-201ENST00000422074 DHFRP00374 187 aa0.79□□□□□ -2.28
LINC00397-201ENST00000422074 RNASE4P34096 147 aaKnown RBP0.79□□□□□ -2.28
LINC00397-201ENST00000422074 ATP5G3P48201 142 aa0.79□□□□□ -2.28
LINC00397-201ENST00000422074 UBE2BP63146 152 aa0.79□□□□□ -2.28
LINC00397-201ENST00000422074 MRPS25P82663 173 aaKnown RBP0.79□□□□□ -2.28
LINC00397-201ENST00000422074 RRN3P1Q2M238 152 aa0.79□□□□□ -2.28
LINC00397-201ENST00000422074 C22orf39Q6P5X5 142 aa0.79□□□□□ -2.28
LINC00397-201ENST00000422074 GOLT1AQ6ZVE7 132 aa0.79□□□□□ -2.28
LINC00397-201ENST00000422074 PDZD9Q8IXQ8 264 aa0.79□□□□□ -2.28
LINC00397-201ENST00000422074 DGCR14Q96DF8 476 aaKnown RBP0.79□□□□□ -2.28
LINC00397-201ENST00000422074 AMELYQ99218 206 aa0.79□□□□□ -2.28
LINC00397-201ENST00000422074 SLC25A21Q9BQT8 299 aaPredicted RBP0.79□□□□□ -2.28
LINC00397-201ENST00000422074 EML6Q6ZMW3 1958 aa0.79□□□□□ -2.28
LINC00397-201ENST00000422074 KDM6AO15550 1401 aaPredicted RBP0.79□□□□□ -2.28
LINC00397-201ENST00000422074 TNS3Q68CZ2 1445 aa0.79□□□□□ -2.28
LINC00397-201ENST00000422074 POLEQ07864 2286 aa0.78□□□□□ -2.28
LINC00397-201ENST00000422074 CACNA1BQ00975 2339 aa0.78□□□□□ -2.28
LINC00397-201ENST00000422074 TMEM210A6NLX4 147 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms