RNA–Protein interactions for RNA: ENST00000421827.2

UBXN11-208, Transcript of UBX domain protein 11, humanhuman

TSL 5

Gene UBXN11, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-208ENST00000421827 RPP30P78346 268 aaKnown RBP13.3□□□□□ -0.28
UBXN11-208ENST00000421827 LYG2Q86SG7 212 aa13.3□□□□□ -0.28
UBXN11-208ENST00000421827 OR51G1Q8NGK1 321 aa13.3□□□□□ -0.28
UBXN11-208ENST00000421827 COQ8AQ8NI60 647 aa13.3□□□□□ -0.28
UBXN11-208ENST00000421827 GLMPQ8WWB7 406 aa13.3□□□□□ -0.28
UBXN11-208ENST00000421827 IGKV1D-37A0A075B6S9 117 aa13.29□□□□□ -0.28
UBXN11-208ENST00000421827 MPTX1A8MV57 137 aa13.29□□□□□ -0.28
UBXN11-208ENST00000421827 ANXA7P20073 488 aaKnown RBP13.29□□□□□ -0.28
UBXN11-208ENST00000421827 AP2S1P53680 142 aaPredicted RBP13.29□□□□□ -0.28
UBXN11-208ENST00000421827 CNPY1Q3B7I2 92 aa13.29□□□□□ -0.28
UBXN11-208ENST00000421827 C4orf46Q504U0 113 aa13.29□□□□□ -0.28
UBXN11-208ENST00000421827 LEMD1Q68G75 181 aa13.29□□□□□ -0.28
UBXN11-208ENST00000421827 DCANP1Q8TF63 244 aa13.29□□□□□ -0.28
UBXN11-208ENST00000421827 RNF125Q96EQ8 232 aa13.29□□□□□ -0.28
UBXN11-208ENST00000421827 LYSTQ99698 3801 aa13.29□□□□□ -0.28
UBXN11-208ENST00000421827 RYR2Q92736 4967 aa13.29□□□□□ -0.28
UBXN11-208ENST00000421827 BUB3O43684 328 aa13.28□□□□□ -0.28
UBXN11-208ENST00000421827 IFNA21P01568 189 aa13.28□□□□□ -0.28
UBXN11-208ENST00000421827 ZNF90Q03938 601 aa13.28□□□□□ -0.28
UBXN11-208ENST00000421827 SACSQ9NZJ4 4579 aa13.28□□□□□ -0.28
UBXN11-208ENST00000421827 A0A0J9YWU9 116 aa13.27□□□□□ -0.29
UBXN11-208ENST00000421827 PLA2G10O15496 165 aa13.27□□□□□ -0.29
UBXN11-208ENST00000421827 FABP1P07148 127 aa13.27□□□□□ -0.29
UBXN11-208ENST00000421827 ZNF688P0C7X2 276 aa13.27□□□□□ -0.29
UBXN11-208ENST00000421827 ID3Q02535 119 aa13.27□□□□□ -0.29
UBXN11-208ENST00000421827 PBDC1Q9BVG4 233 aa13.27□□□□□ -0.29
UBXN11-208ENST00000421827 PRSS46E5RG02 174 aa13.26□□□□□ -0.29
UBXN11-208ENST00000421827 LYRM1O43325 122 aa13.26□□□□□ -0.29
UBXN11-208ENST00000421827 NUP62P37198 522 aaPredicted RBP13.26□□□□□ -0.29
UBXN11-208ENST00000421827 SPANXN5Q5MJ07 72 aa13.26□□□□□ -0.29
UBXN11-208ENST00000421827 OR8G2PQ6IF36 304 aa13.26□□□□□ -0.29
UBXN11-208ENST00000421827 STHQ8IWL8 128 aa13.26□□□□□ -0.29
UBXN11-208ENST00000421827 GATAD1Q8WUU5 269 aa13.26□□□□□ -0.29
UBXN11-208ENST00000421827 TRGV9Q99603 122 aa13.26□□□□□ -0.29
UBXN11-208ENST00000421827 PFDN2Q9UHV9 154 aa13.26□□□□□ -0.29
UBXN11-208ENST00000421827 STRAPQ9Y3F4 350 aaKnown RBP13.26□□□□□ -0.29
UBXN11-208ENST00000421827 LCE6AA0A183 80 aa13.25□□□□□ -0.29
UBXN11-208ENST00000421827 H3BP45 60 aa13.25□□□□□ -0.29
UBXN11-208ENST00000421827 NKX2-1P43699 371 aaPredicted RBP13.25□□□□□ -0.29
UBXN11-208ENST00000421827 POLR2GP62487 172 aaKnown RBP eCLIP13.25□□□□□ -0.29
UBXN11-208ENST00000421827 SIGLEC15Q6ZMC9 328 aa13.25□□□□□ -0.29
UBXN11-208ENST00000421827 THAP8Q8NA92 274 aa13.25□□□□□ -0.29
UBXN11-208ENST00000421827 OR4D5Q8NGN0 318 aa13.25□□□□□ -0.29
UBXN11-208ENST00000421827 C20orf85Q9H1P6 137 aa13.25□□□□□ -0.29
UBXN11-208ENST00000421827 IGKV1OR2-108A0A075B7D4 117 aa13.24□□□□□ -0.29
UBXN11-208ENST00000421827 SNRPGP15A8MWD9 76 aa13.24□□□□□ -0.29
UBXN11-208ENST00000421827 CA1P00915 261 aaPredicted RBP13.24□□□□□ -0.29
UBXN11-208ENST00000421827 LYZP61626 148 aa13.24□□□□□ -0.29
UBXN11-208ENST00000421827 OR2F1Q13607 317 aa13.24□□□□□ -0.29
UBXN11-208ENST00000421827 MITD1Q8WV92 249 aa13.24□□□□□ -0.29
UBXN11-208ENST00000421827 NRN1Q9NPD7 142 aa13.24□□□□□ -0.29
UBXN11-208ENST00000421827 KNCNA6PVL3 124 aa13.23□□□□□ -0.29
UBXN11-208ENST00000421827 EWSR1Q01844 656 aaKnown RBP eCLIP13.23□□□□□ -0.29
UBXN11-208ENST00000421827 TRPT1Q86TN4 253 aaKnown RBP13.23□□□□□ -0.29
UBXN11-208ENST00000421827 RARRES2Q99969 163 aa13.23□□□□□ -0.29
UBXN11-208ENST00000421827 CCDC32Q9BV29 185 aa13.23□□□□□ -0.29
UBXN11-208ENST00000421827 PSENENQ9NZ42 101 aa13.23□□□□□ -0.29
UBXN11-208ENST00000421827 SSSCA1O60232 199 aa13.22□□□□□ -0.29
UBXN11-208ENST00000421827 TCRBP04435 133 aa13.22□□□□□ -0.29
UBXN11-208ENST00000421827 ATF4P18848 351 aaPredicted RBP13.22□□□□□ -0.29
UBXN11-208ENST00000421827 SNRPD3P62318 126 aaKnown RBP13.22□□□□□ -0.29
UBXN11-208ENST00000421827 IAH1Q2TAA2 248 aaPredicted RBP13.22□□□□□ -0.29
UBXN11-208ENST00000421827 PSMG4Q5JS54 123 aa13.22□□□□□ -0.29
UBXN11-208ENST00000421827 LINC00299Q6ZSB3 139 aa13.22□□□□□ -0.29
UBXN11-208ENST00000421827 TMEM217Q8N7C4 229 aa13.22□□□□□ -0.29
UBXN11-208ENST00000421827 SMIM8Q96KF7 97 aa13.22□□□□□ -0.29
UBXN11-208ENST00000421827 SEPSECSQ9HD40 501 aaKnown RBP13.22□□□□□ -0.29
UBXN11-208ENST00000421827 CFDP00746 253 aaPredicted RBP13.21□□□□□ -0.29
UBXN11-208ENST00000421827 AKR1C1Q04828 323 aa13.21□□□□□ -0.29
UBXN11-208ENST00000421827 ACTL10Q5JWF8 245 aa13.21□□□□□ -0.29
UBXN11-208ENST00000421827 C1orf194Q5T5A4 169 aa13.21□□□□□ -0.29
UBXN11-208ENST00000421827 ACOT7LQ6ZUV0 252 aa13.21□□□□□ -0.29
UBXN11-208ENST00000421827 ZBTB8BQ8NAP8 495 aaPredicted RBP13.21□□□□□ -0.29
UBXN11-208ENST00000421827 OR11H2Q8NH07 326 aa13.21□□□□□ -0.29
UBXN11-208ENST00000421827 PPP1R14BQ96C90 147 aa13.21□□□□□ -0.29
UBXN11-208ENST00000421827 RAB40CQ96S21 281 aa13.21□□□□□ -0.29
UBXN11-208ENST00000421827 FBXL17Q9UF56 701 aa13.21□□□□□ -0.29
UBXN11-208ENST00000421827 AGRNO00468 2067 aa13.2□□□□□ -0.3
UBXN11-208ENST00000421827 TRAV6A0A075B6T7 132 aa13.2□□□□□ -0.3
UBXN11-208ENST00000421827 CXorf65A6NEN9 183 aa13.2□□□□□ -0.3
UBXN11-208ENST00000421827 SCGB1D2O95969 90 aa13.2□□□□□ -0.3
UBXN11-208ENST00000421827 SPP1P10451 314 aa13.2□□□□□ -0.3
UBXN11-208ENST00000421827 PLECQ15149 4684 aaKnown RBP13.2□□□□□ -0.3
UBXN11-208ENST00000421827 MORN3Q6PF18 240 aaPredicted RBP13.2□□□□□ -0.3
UBXN11-208ENST00000421827 NUDT15Q9NV35 164 aa13.2□□□□□ -0.3
UBXN11-208ENST00000421827 GSKIPQ9P0R6 139 aa13.2□□□□□ -0.3
UBXN11-208ENST00000421827 GIG44P09565 113 aaPredicted RBP13.19□□□□□ -0.3
UBXN11-208ENST00000421827 PAX9P55771 341 aa13.19□□□□□ -0.3
UBXN11-208ENST00000421827 PMS2P11Q13670 270 aa13.19□□□□□ -0.3
UBXN11-208ENST00000421827 TMEM41BQ5BJD5 291 aa13.19□□□□□ -0.3
UBXN11-208ENST00000421827 TMEM144Q7Z5S9 345 aa13.19□□□□□ -0.3
UBXN11-208ENST00000421827 BPIFCQ8NFQ6 507 aa13.19□□□□□ -0.3
UBXN11-208ENST00000421827 S100ZQ8WXG8 99 aa13.19□□□□□ -0.3
UBXN11-208ENST00000421827 SMCO3A2RU48 225 aa13.18□□□□□ -0.3
UBXN11-208ENST00000421827 PMS2P5A8MQ11 134 aa13.18□□□□□ -0.3
UBXN11-208ENST00000421827 JTBO76095 146 aa13.18□□□□□ -0.3
UBXN11-208ENST00000421827 SLC45A2Q9UMX9 530 aa13.18□□□□□ -0.3
UBXN11-208ENST00000421827 CCSO14618 274 aa13.17□□□□□ -0.3
UBXN11-208ENST00000421827 H2AFB2P0C5Z0 115 aa13.17□□□□□ -0.3
UBXN11-208ENST00000421827 C4BPBP20851 252 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms