RNA–Protein interactions for RNA: ENST00000421431.1

UBL4A-204, Transcript of ubiquitin like 4A, humanhuman

TSL 5

Gene UBL4A, Length 1,652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4A-204ENST00000421431 TMEM89A2RUT3 159 aa12.34□□□□□ -0.43
UBL4A-204ENST00000421431 H2AFB1P0C5Y9 115 aa12.34□□□□□ -0.43
UBL4A-204ENST00000421431 YPEL3P61236 119 aaPredicted RBP12.34□□□□□ -0.43
UBL4A-204ENST00000421431 CLEC19AQ6UXS0 136 aa12.34□□□□□ -0.43
UBL4A-204ENST00000421431 PATE2Q6UY27 113 aa12.34□□□□□ -0.43
UBL4A-204ENST00000421431 MBD3L1Q8WWY6 194 aa12.34□□□□□ -0.43
UBL4A-204ENST00000421431 RAB24Q969Q5 203 aa12.34□□□□□ -0.43
UBL4A-204ENST00000421431 USMG5Q96IX5 58 aa12.34□□□□□ -0.43
UBL4A-204ENST00000421431 SEPSECSQ9HD40 501 aaKnown RBP12.34□□□□□ -0.43
UBL4A-204ENST00000421431 MED9Q9NWA0 146 aa12.34□□□□□ -0.43
UBL4A-204ENST00000421431 A0A1B0GV50 99 aa12.33□□□□□ -0.44
UBL4A-204ENST00000421431 TOMM40O96008 361 aa12.33□□□□□ -0.44
UBL4A-204ENST00000421431 CLEC3BP05452 202 aa12.33□□□□□ -0.44
UBL4A-204ENST00000421431 S100A1P23297 94 aa12.33□□□□□ -0.44
UBL4A-204ENST00000421431 CDC34P49427 236 aaPredicted RBP12.33□□□□□ -0.44
UBL4A-204ENST00000421431 PLP1P60201 277 aa12.33□□□□□ -0.44
UBL4A-204ENST00000421431 SPATA31B1PQ5VZV4 182 aa12.33□□□□□ -0.44
UBL4A-204ENST00000421431 SFT2D1Q8WV19 159 aa12.33□□□□□ -0.44
UBL4A-204ENST00000421431 ACTR3CQ9C0K3 210 aaPredicted RBP12.33□□□□□ -0.44
UBL4A-204ENST00000421431 DOK5Q9P104 306 aa12.33□□□□□ -0.44
UBL4A-204ENST00000421431 CTXND1A0A1B0GTU2 59 aa12.32□□□□□ -0.44
UBL4A-204ENST00000421431 HMGB3O15347 200 aaKnown RBP12.32□□□□□ -0.44
UBL4A-204ENST00000421431 IGHV3-11P01762 117 aa12.32□□□□□ -0.44
UBL4A-204ENST00000421431 CRYBA1P05813 215 aa12.32□□□□□ -0.44
UBL4A-204ENST00000421431 OR5G3P0C626 314 aa12.32□□□□□ -0.44
UBL4A-204ENST00000421431 RD3LP0DJH9 198 aa12.32□□□□□ -0.44
UBL4A-204ENST00000421431 SLC35B1P78383 322 aa12.32□□□□□ -0.44
UBL4A-204ENST00000421431 CCL20P78556 96 aa12.32□□□□□ -0.44
UBL4A-204ENST00000421431 FOXE3Q13461 319 aa12.32□□□□□ -0.44
UBL4A-204ENST00000421431 MORN5Q5VZ52 161 aa12.32□□□□□ -0.44
UBL4A-204ENST00000421431 TEX38Q6PEX7 206 aa12.32□□□□□ -0.44
UBL4A-204ENST00000421431 LCN15Q6UWW0 184 aa12.32□□□□□ -0.44
UBL4A-204ENST00000421431 COMMD7Q86VX2 200 aa12.32□□□□□ -0.44
UBL4A-204ENST00000421431 MYOZ3Q8TDC0 251 aa12.32□□□□□ -0.44
UBL4A-204ENST00000421431 JMJD8Q96S16 334 aa12.32□□□□□ -0.44
UBL4A-204ENST00000421431 ATP6V0BQ99437 205 aa12.32□□□□□ -0.44
UBL4A-204ENST00000421431 TRAV1-1A0A0B4J248 108 aa12.32□□□□□ -0.44
UBL4A-204ENST00000421431 MAP1LC3B2A6NCE7 125 aa12.32□□□□□ -0.44
UBL4A-204ENST00000421431 TGOLN2O43493 480 aa12.32□□□□□ -0.44
UBL4A-204ENST00000421431 TRBV12-3P01733 135 aa12.32□□□□□ -0.44
UBL4A-204ENST00000421431 RPLP1P05386 114 aaKnown RBP12.32□□□□□ -0.44
UBL4A-204ENST00000421431 ELANEP08246 267 aa12.32□□□□□ -0.44
UBL4A-204ENST00000421431 FGF8P55075 233 aaPredicted RBP12.32□□□□□ -0.44
UBL4A-204ENST00000421431 SRSF2Q01130 221 aaKnown RBP12.32□□□□□ -0.44
UBL4A-204ENST00000421431 RNF152Q8N8N0 203 aa12.32□□□□□ -0.44
UBL4A-204ENST00000421431 MAP1LC3BQ9GZQ8 125 aa12.32□□□□□ -0.44
UBL4A-204ENST00000421431 C16orf95Q9H693 158 aa12.32□□□□□ -0.44
UBL4A-204ENST00000421431 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.31□□□□□ -0.44
UBL4A-204ENST00000421431 NUPL2O15504 423 aaKnown RBP12.31□□□□□ -0.44
UBL4A-204ENST00000421431 FAM78BQ5VT40 261 aa12.31□□□□□ -0.44
UBL4A-204ENST00000421431 ZNF343Q6P1L6 599 aa12.31□□□□□ -0.44
UBL4A-204ENST00000421431 KLHDC1Q8N7A1 406 aa12.31□□□□□ -0.44
UBL4A-204ENST00000421431 ZNF491Q8N8L2 437 aa12.31□□□□□ -0.44
UBL4A-204ENST00000421431 OR51G1Q8NGK1 321 aa12.31□□□□□ -0.44
UBL4A-204ENST00000421431 WIPF2Q8TF74 440 aaPredicted RBP12.31□□□□□ -0.44
UBL4A-204ENST00000421431 GATAD1Q8WUU5 269 aa12.31□□□□□ -0.44
UBL4A-204ENST00000421431 UHRF2Q96PU4 802 aa12.31□□□□□ -0.44
UBL4A-204ENST00000421431 DNAJC4Q9NNZ3 241 aa12.31□□□□□ -0.44
UBL4A-204ENST00000421431 GAR1Q9NY12 217 aaKnown RBP12.31□□□□□ -0.44
UBL4A-204ENST00000421431 PFDN2Q9UHV9 154 aa12.31□□□□□ -0.44
UBL4A-204ENST00000421431 A0A0G2JLM5 398 aa12.3□□□□□ -0.44
UBL4A-204ENST00000421431 A0A1W2PPV4 95 aa12.3□□□□□ -0.44
UBL4A-204ENST00000421431 WI2-2373I1.2A0A1W2PRP0 233 aa12.3□□□□□ -0.44
UBL4A-204ENST00000421431 PPP5D1E7EU14 171 aa12.3□□□□□ -0.44
UBL4A-204ENST00000421431 TCF21O43680 179 aa12.3□□□□□ -0.44
UBL4A-204ENST00000421431 COX7A2P2O60397 106 aa12.3□□□□□ -0.44
UBL4A-204ENST00000421431 FABP1P07148 127 aa12.3□□□□□ -0.44
UBL4A-204ENST00000421431 ORM2P19652 201 aa12.3□□□□□ -0.44
UBL4A-204ENST00000421431 LYZP61626 148 aa12.3□□□□□ -0.44
UBL4A-204ENST00000421431 RHOBP62745 196 aa12.3□□□□□ -0.44
UBL4A-204ENST00000421431 MIR17HGQ75NE6 70 aa12.3□□□□□ -0.44
UBL4A-204ENST00000421431 OR1B1Q8NGR6 318 aa12.3□□□□□ -0.44
UBL4A-204ENST00000421431 C19orf24Q9BVV8 132 aa12.3□□□□□ -0.44
UBL4A-204ENST00000421431 FUT9Q9Y231 359 aa12.3□□□□□ -0.44
UBL4A-204ENST00000421431 IGHV3-35A0A0C4DH35 117 aa12.29□□□□□ -0.44
UBL4A-204ENST00000421431 OR2C1O95371 312 aa12.29□□□□□ -0.44
UBL4A-204ENST00000421431 STAG3L2P0CL84 134 aa12.29□□□□□ -0.44
UBL4A-204ENST00000421431 STAG3L3P0CL85 134 aa12.29□□□□□ -0.44
UBL4A-204ENST00000421431 TCTEX1D4Q5JR98 221 aa12.29□□□□□ -0.44
UBL4A-204ENST00000421431 IL34Q6ZMJ4 242 aa12.29□□□□□ -0.44
UBL4A-204ENST00000421431 OR1L4Q8NGR5 311 aa12.29□□□□□ -0.44
UBL4A-204ENST00000421431 LINC01006Q8NI28 216 aa12.29□□□□□ -0.44
UBL4A-204ENST00000421431 MARC2Q969Z3 335 aa12.29□□□□□ -0.44
UBL4A-204ENST00000421431 PFDN5Q99471 154 aa12.29□□□□□ -0.44
UBL4A-204ENST00000421431 ELOA3CA0A087WX78 387 aaPredicted RBP12.29□□□□□ -0.44
UBL4A-204ENST00000421431 HYPMO75409 117 aa12.29□□□□□ -0.44
UBL4A-204ENST00000421431 SCGB2A1O75556 95 aa12.29□□□□□ -0.44
UBL4A-204ENST00000421431 HBE1P02100 147 aa12.29□□□□□ -0.44
UBL4A-204ENST00000421431 IL4P05112 153 aa12.29□□□□□ -0.44
UBL4A-204ENST00000421431 USF2Q15853 346 aaPredicted RBP12.29□□□□□ -0.44
UBL4A-204ENST00000421431 C10orf113Q5VZT2 155 aa12.29□□□□□ -0.44
UBL4A-204ENST00000421431 ZNF600Q6ZNG1 722 aa12.29□□□□□ -0.44
UBL4A-204ENST00000421431 OR4X2Q8NGF9 303 aa12.29□□□□□ -0.44
UBL4A-204ENST00000421431 Q8WTZ3 238 aa12.29□□□□□ -0.44
UBL4A-204ENST00000421431 RNF125Q96EQ8 232 aa12.29□□□□□ -0.44
UBL4A-204ENST00000421431 SCRT1Q9BWW7 348 aa12.29□□□□□ -0.44
UBL4A-204ENST00000421431 GNB4Q9HAV0 340 aa12.29□□□□□ -0.44
UBL4A-204ENST00000421431 MRPL27Q9P0M9 148 aaKnown RBP12.29□□□□□ -0.44
UBL4A-204ENST00000421431 PUS1Q9Y606 427 aaKnown RBP eCLIP12.29□□□□□ -0.44
UBL4A-204ENST00000421431 NDUFA7O95182 113 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms