RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 TMBIM6P55061 237 aa13.67□□□□□ -0.22
VARS2-202ENST00000421263 PSMG4Q5JS54 123 aa13.67□□□□□ -0.22
VARS2-202ENST00000421263 LYZL2Q7Z4W2 148 aa13.67□□□□□ -0.22
VARS2-202ENST00000421263 NRN1Q9NPD7 142 aa13.67□□□□□ -0.22
VARS2-202ENST00000421263 HERC2O95714 4834 aa13.67□□□□□ -0.22
VARS2-202ENST00000421263 IGLL5B9A064 214 aa13.66□□□□□ -0.22
VARS2-202ENST00000421263 IFNA10P01566 189 aa13.66□□□□□ -0.22
VARS2-202ENST00000421263 PSG1P11464 419 aa13.66□□□□□ -0.22
VARS2-202ENST00000421263 HLA-DMBP28068 263 aa13.66□□□□□ -0.22
VARS2-202ENST00000421263 SMCO1Q147U7 214 aa13.66□□□□□ -0.22
VARS2-202ENST00000421263 DTD1Q8TEA8 209 aa13.66□□□□□ -0.22
VARS2-202ENST00000421263 ACY3Q96HD9 319 aa13.66□□□□□ -0.22
VARS2-202ENST00000421263 SLIRPQ9GZT3 109 aaKnown RBP13.66□□□□□ -0.22
VARS2-202ENST00000421263 RBKSQ9H477 322 aa13.66□□□□□ -0.22
VARS2-202ENST00000421263 CLEC5AQ9NY25 188 aa13.66□□□□□ -0.22
VARS2-202ENST00000421263 H3BMM0 161 aa13.65□□□□□ -0.22
VARS2-202ENST00000421263 ATP5IP56385 69 aaPredicted RBP13.65□□□□□ -0.22
VARS2-202ENST00000421263 SNRPD3P62318 126 aaKnown RBP13.65□□□□□ -0.22
VARS2-202ENST00000421263 SIGLEC15Q6ZMC9 328 aa13.65□□□□□ -0.22
VARS2-202ENST00000421263 LGI3Q8N145 548 aa13.65□□□□□ -0.22
VARS2-202ENST00000421263 TBC1D24Q9ULP9 559 aa13.65□□□□□ -0.22
VARS2-202ENST00000421263 AKR1C4P17516 323 aa13.64□□□□□ -0.23
VARS2-202ENST00000421263 TNFSF8P32971 234 aa13.64□□□□□ -0.23
VARS2-202ENST00000421263 GPX4P36969 197 aaPredicted RBP13.64□□□□□ -0.23
VARS2-202ENST00000421263 KLF9Q13886 244 aaPredicted RBP13.64□□□□□ -0.23
VARS2-202ENST00000421263 OR51G1Q8NGK1 321 aa13.64□□□□□ -0.23
VARS2-202ENST00000421263 IGKV1D-37A0A075B6S9 117 aa13.63□□□□□ -0.23
VARS2-202ENST00000421263 TRAV10A0A0B4J240 114 aa13.63□□□□□ -0.23
VARS2-202ENST00000421263 NUTF2P61970 127 aaKnown RBP13.63□□□□□ -0.23
VARS2-202ENST00000421263 GAMTQ14353 236 aa13.63□□□□□ -0.23
VARS2-202ENST00000421263 Q6ZTC4 211 aa13.63□□□□□ -0.23
VARS2-202ENST00000421263 RNF125Q96EQ8 232 aa13.63□□□□□ -0.23
VARS2-202ENST00000421263 C1QTNF4Q9BXJ3 329 aa13.63□□□□□ -0.23
VARS2-202ENST00000421263 FABP12A6NFH5 140 aa13.62□□□□□ -0.23
VARS2-202ENST00000421263 PITX3O75364 302 aa13.62□□□□□ -0.23
VARS2-202ENST00000421263 NKX2-1P43699 371 aaPredicted RBP13.62□□□□□ -0.23
VARS2-202ENST00000421263 SRPXP78539 464 aa13.62□□□□□ -0.23
VARS2-202ENST00000421263 OR8G2PQ6IF36 304 aa13.62□□□□□ -0.23
VARS2-202ENST00000421263 MCUBQ9NWR8 336 aa13.62□□□□□ -0.23
VARS2-202ENST00000421263 ANXA3P12429 323 aa13.61□□□□□ -0.23
VARS2-202ENST00000421263 HLA-DRB4P13762 266 aa13.61□□□□□ -0.23
VARS2-202ENST00000421263 CELA1Q9UNI1 258 aa13.61□□□□□ -0.23
VARS2-202ENST00000421263 HLA-DRB4X5D2U9 266 aa13.61□□□□□ -0.23
VARS2-202ENST00000421263 HECTD4Q9Y4D8 3996 aa13.61□□□□□ -0.23
VARS2-202ENST00000421263 PIGBOS1A0A0B4J2F0 54 aa13.6□□□□□ -0.23
VARS2-202ENST00000421263 DUXBA0A1W2PPF3 345 aa13.6□□□□□ -0.23
VARS2-202ENST00000421263 H3BMQ9 156 aa13.6□□□□□ -0.23
VARS2-202ENST00000421263 NUP62P37198 522 aaPredicted RBP13.6□□□□□ -0.23
VARS2-202ENST00000421263 ZNF90Q03938 601 aa13.6□□□□□ -0.23
VARS2-202ENST00000421263 C12orf74Q32Q52 190 aa13.6□□□□□ -0.23
VARS2-202ENST00000421263 LRTM2Q8N967 370 aa13.6□□□□□ -0.23
VARS2-202ENST00000421263 RNF126Q9BV68 326 aa13.6□□□□□ -0.23
VARS2-202ENST00000421263 XCL2Q9UBD3 114 aa13.6□□□□□ -0.23
VARS2-202ENST00000421263 PFDN2Q9UHV9 154 aa13.6□□□□□ -0.23
VARS2-202ENST00000421263 IGHV4-4A0A075B6R2 117 aa13.59□□□□□ -0.23
VARS2-202ENST00000421263 ZFP92A6NM28 416 aa13.59□□□□□ -0.23
VARS2-202ENST00000421263 TMEM128Q5BJH2 165 aa13.59□□□□□ -0.23
VARS2-202ENST00000421263 C1orf194Q5T5A4 169 aa13.59□□□□□ -0.23
VARS2-202ENST00000421263 ZNF705AQ6ZN79 300 aaPredicted RBP13.59□□□□□ -0.23
VARS2-202ENST00000421263 OR1S1Q8NH92 325 aa13.59□□□□□ -0.23
VARS2-202ENST00000421263 TRIM63Q969Q1 353 aa13.59□□□□□ -0.23
VARS2-202ENST00000421263 CLUHP3Q96NS8 147 aa13.59□□□□□ -0.23
VARS2-202ENST00000421263 NEU1Q99519 415 aa13.59□□□□□ -0.23
VARS2-202ENST00000421263 WDR12Q9GZL7 423 aaKnown RBP13.59□□□□□ -0.23
VARS2-202ENST00000421263 SNRPGP15A8MWD9 76 aa13.58□□□□□ -0.24
VARS2-202ENST00000421263 SOCS3O14543 225 aa13.58□□□□□ -0.24
VARS2-202ENST00000421263 SLC25A6P12236 298 aa13.58□□□□□ -0.24
VARS2-202ENST00000421263 GDF5OSQ5U4N7 250 aa13.58□□□□□ -0.24
VARS2-202ENST00000421263 MCFD2Q8NI22 146 aa13.58□□□□□ -0.24
VARS2-202ENST00000421263 SLC35E1Q96K37 410 aa13.58□□□□□ -0.24
VARS2-202ENST00000421263 TRGV9Q99603 122 aa13.58□□□□□ -0.24
VARS2-202ENST00000421263 PBDC1Q9BVG4 233 aa13.58□□□□□ -0.24
VARS2-202ENST00000421263 DNAH17Q9UFH2 4485 aa13.58□□□□□ -0.24
VARS2-202ENST00000421263 DNAH2Q9P225 4427 aa13.58□□□□□ -0.24
VARS2-202ENST00000421263 IGKV1OR2-108A0A075B7D4 117 aa13.57□□□□□ -0.24
VARS2-202ENST00000421263 ZNF705FA8MVS1 300 aaPredicted RBP13.57□□□□□ -0.24
VARS2-202ENST00000421263 ZNF705DP0CH99 300 aaPredicted RBP13.57□□□□□ -0.24
VARS2-202ENST00000421263 ZNF705BP0CI00 300 aaPredicted RBP13.57□□□□□ -0.24
VARS2-202ENST00000421263 CENPSQ8N2Z9 138 aa13.57□□□□□ -0.24
VARS2-202ENST00000421263 SAV1Q9H4B6 383 aaPredicted RBP13.57□□□□□ -0.24
VARS2-202ENST00000421263 DEFB131BA0A096LNP1 70 aa13.56□□□□□ -0.24
VARS2-202ENST00000421263 FABP1P07148 127 aa13.56□□□□□ -0.24
VARS2-202ENST00000421263 FAUP35544 74 aaKnown RBP13.56□□□□□ -0.24
VARS2-202ENST00000421263 ID1P41134 155 aa13.56□□□□□ -0.24
VARS2-202ENST00000421263 PSMB3P49720 205 aa13.56□□□□□ -0.24
VARS2-202ENST00000421263 DEFB1P60022 68 aa13.56□□□□□ -0.24
VARS2-202ENST00000421263 THAP8Q8NA92 274 aa13.56□□□□□ -0.24
VARS2-202ENST00000421263 FAT2Q9NYQ8 4349 aa13.55□□□□□ -0.24
VARS2-202ENST00000421263 SMIM9A6NGZ8 99 aa13.55□□□□□ -0.24
VARS2-202ENST00000421263 PRSS46E5RG02 174 aa13.55□□□□□ -0.24
VARS2-202ENST00000421263 AMBPP02760 352 aa13.55□□□□□ -0.24
VARS2-202ENST00000421263 LYZP61626 148 aa13.55□□□□□ -0.24
VARS2-202ENST00000421263 RAB11AP62491 216 aa13.55□□□□□ -0.24
VARS2-202ENST00000421263 FOXI2Q6ZQN5 318 aa13.55□□□□□ -0.24
VARS2-202ENST00000421263 ZNF767PQ75MW2 155 aa13.55□□□□□ -0.24
VARS2-202ENST00000421263 TMED4Q7Z7H5 227 aa13.55□□□□□ -0.24
VARS2-202ENST00000421263 TOMM5Q8N4H5 51 aa13.55□□□□□ -0.24
VARS2-202ENST00000421263 DEDD2Q8WXF8 326 aa13.55□□□□□ -0.24
VARS2-202ENST00000421263 LINC00052Q96N35 136 aa13.55□□□□□ -0.24
VARS2-202ENST00000421263 SLC25A21Q9BQT8 299 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms