RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 K7EIM0 57 aa11.54□□□□□ -0.56
HLA-DPA1-242ENST00000419277 NBEAP1P0C6P0 100 aa11.54□□□□□ -0.56
HLA-DPA1-242ENST00000419277 RD3LP0DJH9 198 aa11.54□□□□□ -0.56
HLA-DPA1-242ENST00000419277 UQCRFS1P47985 274 aa11.54□□□□□ -0.56
HLA-DPA1-242ENST00000419277 DLX1P56177 255 aa11.54□□□□□ -0.56
HLA-DPA1-242ENST00000419277 RPL15P61313 204 aaKnown RBP11.54□□□□□ -0.56
HLA-DPA1-242ENST00000419277 KLRD1Q13241 179 aa11.54□□□□□ -0.56
HLA-DPA1-242ENST00000419277 TMEM183BQ1AE95 376 aa11.54□□□□□ -0.56
HLA-DPA1-242ENST00000419277 KLK9Q2XQG4 91 aa11.54□□□□□ -0.56
HLA-DPA1-242ENST00000419277 LHFPL4Q7Z7J7 247 aa11.54□□□□□ -0.56
HLA-DPA1-242ENST00000419277 LYPD1Q8N2G4 141 aa11.54□□□□□ -0.56
HLA-DPA1-242ENST00000419277 FMC1Q96HJ9 113 aa11.54□□□□□ -0.56
HLA-DPA1-242ENST00000419277 ATG101Q9BSB4 218 aa11.54□□□□□ -0.56
HLA-DPA1-242ENST00000419277 KLK9Q9UKQ9 250 aa11.54□□□□□ -0.56
HLA-DPA1-242ENST00000419277 DMRT1Q9Y5R6 373 aa11.54□□□□□ -0.56
HLA-DPA1-242ENST00000419277 V9GYV3 84 aa11.54□□□□□ -0.56
HLA-DPA1-242ENST00000419277 IGLV11-55A0A075B6I3 123 aa11.53□□□□□ -0.56
HLA-DPA1-242ENST00000419277 PGPEP1LA6NFU8 196 aa11.53□□□□□ -0.56
HLA-DPA1-242ENST00000419277 FCN1O00602 326 aa11.53□□□□□ -0.56
HLA-DPA1-242ENST00000419277 ZZEF1O43149 2961 aa11.53□□□□□ -0.56
HLA-DPA1-242ENST00000419277 PSG1P11464 419 aa11.53□□□□□ -0.56
HLA-DPA1-242ENST00000419277 TMEM11P17152 192 aa11.53□□□□□ -0.56
HLA-DPA1-242ENST00000419277 IBA57Q5T440 356 aaKnown RBP11.53□□□□□ -0.56
HLA-DPA1-242ENST00000419277 MORN5Q5VZ52 161 aa11.53□□□□□ -0.56
HLA-DPA1-242ENST00000419277 TRAPPC1Q9Y5R8 145 aa11.53□□□□□ -0.56
HLA-DPA1-242ENST00000419277 SMG1Q96Q15 3661 aaKnown RBP11.53□□□□□ -0.56
HLA-DPA1-242ENST00000419277 ITPR1Q14643 2758 aa11.53□□□□□ -0.56
HLA-DPA1-242ENST00000419277 PKD1L2Q7Z442 2459 aa11.53□□□□□ -0.56
HLA-DPA1-242ENST00000419277 PYYP10082 97 aa11.52□□□□□ -0.56
HLA-DPA1-242ENST00000419277 ZFP36P26651 326 aaKnown RBP11.52□□□□□ -0.56
HLA-DPA1-242ENST00000419277 MFAP4P55083 255 aa11.52□□□□□ -0.56
HLA-DPA1-242ENST00000419277 LMO4P61968 165 aa11.52□□□□□ -0.56
HLA-DPA1-242ENST00000419277 UBE2G1P62253 170 aa11.52□□□□□ -0.56
HLA-DPA1-242ENST00000419277 BPIFA4PQ86YQ2 179 aa11.52□□□□□ -0.56
HLA-DPA1-242ENST00000419277 ARL6IP6Q8N6S5 226 aa11.52□□□□□ -0.56
HLA-DPA1-242ENST00000419277 PIMREGQ9BSJ6 248 aa11.52□□□□□ -0.56
HLA-DPA1-242ENST00000419277 BPESC1Q9GZL8 116 aa11.52□□□□□ -0.56
HLA-DPA1-242ENST00000419277 OTORQ9NRC9 128 aa11.52□□□□□ -0.56
HLA-DPA1-242ENST00000419277 MRPL27Q9P0M9 148 aaKnown RBP11.52□□□□□ -0.56
HLA-DPA1-242ENST00000419277 EPDR1Q9UM22 224 aa11.52□□□□□ -0.56
HLA-DPA1-242ENST00000419277 TRAV5A0A0B4J249 113 aa11.52□□□□□ -0.57
HLA-DPA1-242ENST00000419277 IGKV1-17P01599 117 aa11.52□□□□□ -0.57
HLA-DPA1-242ENST00000419277 HIST1H1EP10412 219 aaKnown RBP11.52□□□□□ -0.57
HLA-DPA1-242ENST00000419277 CX3CL1P78423 397 aa11.52□□□□□ -0.57
HLA-DPA1-242ENST00000419277 PDE6HQ13956 83 aa11.52□□□□□ -0.57
HLA-DPA1-242ENST00000419277 GNB1LQ9BYB4 327 aa11.52□□□□□ -0.57
HLA-DPA1-242ENST00000419277 SLC25A39Q9BZJ4 359 aaPredicted RBP11.52□□□□□ -0.57
HLA-DPA1-242ENST00000419277 TRBV6-1A0A0K0K1D8 114 aa11.51□□□□□ -0.57
HLA-DPA1-242ENST00000419277 XKRY2A2RUG3 117 aa11.51□□□□□ -0.57
HLA-DPA1-242ENST00000419277 IGLV2-8P01709 118 aa11.51□□□□□ -0.57
HLA-DPA1-242ENST00000419277 LYZP61626 148 aa11.51□□□□□ -0.57
HLA-DPA1-242ENST00000419277 CT83Q5H943 113 aa11.51□□□□□ -0.57
HLA-DPA1-242ENST00000419277 RNF125Q96EQ8 232 aa11.51□□□□□ -0.57
HLA-DPA1-242ENST00000419277 ATP6V0BQ99437 205 aa11.51□□□□□ -0.57
HLA-DPA1-242ENST00000419277 SHANK2-AS3Q9BTD1 123 aa11.51□□□□□ -0.57
HLA-DPA1-242ENST00000419277 H3BRN7 92 aa11.5□□□□□ -0.57
HLA-DPA1-242ENST00000419277 GNG7O60262 68 aa11.5□□□□□ -0.57
HLA-DPA1-242ENST00000419277 IGHV3-48P01763 117 aa11.5□□□□□ -0.57
HLA-DPA1-242ENST00000419277 ZNF600Q6ZNG1 722 aa11.5□□□□□ -0.57
HLA-DPA1-242ENST00000419277 BAGE2Q86Y30 109 aa11.5□□□□□ -0.57
HLA-DPA1-242ENST00000419277 OR4F17Q8NGA8 305 aa11.5□□□□□ -0.57
HLA-DPA1-242ENST00000419277 VN1R17PQ8TDU5 208 aa11.5□□□□□ -0.57
HLA-DPA1-242ENST00000419277 GPR82Q96P67 336 aa11.5□□□□□ -0.57
HLA-DPA1-242ENST00000419277 TBX15Q96SF7 602 aa11.5□□□□□ -0.57
HLA-DPA1-242ENST00000419277 SPOCK3Q9BQ16 436 aa11.5□□□□□ -0.57
HLA-DPA1-242ENST00000419277 AURKAIP1Q9NWT8 199 aaPredicted RBP11.5□□□□□ -0.57
HLA-DPA1-242ENST00000419277 SERTM2A0A1B0GWG4 89 aa11.49□□□□□ -0.57
HLA-DPA1-242ENST00000419277 SMIM27A0A1W2PRY6 76 aa11.49□□□□□ -0.57
HLA-DPA1-242ENST00000419277 NCBP2LA6PVI3 153 aaKnown RBP11.49□□□□□ -0.57
HLA-DPA1-242ENST00000419277 SLC25A5P05141 298 aaKnown RBP11.49□□□□□ -0.57
HLA-DPA1-242ENST00000419277 RAB9AP51151 201 aa11.49□□□□□ -0.57
HLA-DPA1-242ENST00000419277 PRB3Q04118 309 aaPredicted RBP11.49□□□□□ -0.57
HLA-DPA1-242ENST00000419277 TMEM18Q96B42 140 aa11.49□□□□□ -0.57
HLA-DPA1-242ENST00000419277 FBLL1A6NHQ2 334 aaKnown RBP11.49□□□□□ -0.57
HLA-DPA1-242ENST00000419277 IFITM10A6NMD0 228 aa11.49□□□□□ -0.57
HLA-DPA1-242ENST00000419277 C19orf84I3L1E1 186 aa11.49□□□□□ -0.57
HLA-DPA1-242ENST00000419277 K7EQM0 130 aa11.49□□□□□ -0.57
HLA-DPA1-242ENST00000419277 HLA-DQA1P01909 254 aa11.49□□□□□ -0.57
HLA-DPA1-242ENST00000419277 APELAP0DMC3 54 aa11.49□□□□□ -0.57
HLA-DPA1-242ENST00000419277 PACRGQ96M98 296 aaPredicted RBP11.49□□□□□ -0.57
HLA-DPA1-242ENST00000419277 CCL19Q99731 98 aa11.49□□□□□ -0.57
HLA-DPA1-242ENST00000419277 GPR61Q9BZJ8 451 aa11.49□□□□□ -0.57
HLA-DPA1-242ENST00000419277 NIT2Q9NQR4 276 aa11.49□□□□□ -0.57
HLA-DPA1-242ENST00000419277 C21orf62Q9NYP8 219 aa11.49□□□□□ -0.57
HLA-DPA1-242ENST00000419277 ZNF492Q9P255 531 aa11.49□□□□□ -0.57
HLA-DPA1-242ENST00000419277 SOX21Q9Y651 276 aaPredicted RBP11.49□□□□□ -0.57
HLA-DPA1-242ENST00000419277 WI2-2373I1.2A0A1W2PRP0 233 aa11.48□□□□□ -0.57
HLA-DPA1-242ENST00000419277 NDUFS7O75251 213 aa11.48□□□□□ -0.57
HLA-DPA1-242ENST00000419277 IGHV4-39P01824 125 aa11.48□□□□□ -0.57
HLA-DPA1-242ENST00000419277 MGST1P10620 155 aaKnown RBP11.48□□□□□ -0.57
HLA-DPA1-242ENST00000419277 SAA4P35542 130 aa11.48□□□□□ -0.57
HLA-DPA1-242ENST00000419277 RANP62826 216 aaKnown RBP11.48□□□□□ -0.57
HLA-DPA1-242ENST00000419277 ATP5L2Q7Z4Y8 100 aa11.48□□□□□ -0.57
HLA-DPA1-242ENST00000419277 FAM110DQ8TAY7 271 aaPredicted RBP11.48□□□□□ -0.57
HLA-DPA1-242ENST00000419277 CMTM2Q8TAZ6 248 aa11.48□□□□□ -0.57
HLA-DPA1-242ENST00000419277 WIPF2Q8TF74 440 aaPredicted RBP11.48□□□□□ -0.57
HLA-DPA1-242ENST00000419277 FAM168AQ92567 244 aa11.48□□□□□ -0.57
HLA-DPA1-242ENST00000419277 FANCD2OSQ96PS1 177 aa11.48□□□□□ -0.57
HLA-DPA1-242ENST00000419277 HIST1H2BLQ99880 126 aa11.48□□□□□ -0.57
HLA-DPA1-242ENST00000419277 Q9H3A6 140 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms