RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 AP2S1P53680 142 aaPredicted RBP11.5□□□□□ -0.57
ITGB1-204ENST00000417122 RPP30P78346 268 aaKnown RBP11.5□□□□□ -0.57
ITGB1-204ENST00000417122 DHRS2Q13268 280 aa11.5□□□□□ -0.57
ITGB1-204ENST00000417122 OR51G1Q8NGK1 321 aa11.5□□□□□ -0.57
ITGB1-204ENST00000417122 COQ8AQ8NI60 647 aa11.5□□□□□ -0.57
ITGB1-204ENST00000417122 DCANP1Q8TF63 244 aa11.5□□□□□ -0.57
ITGB1-204ENST00000417122 RNF125Q96EQ8 232 aa11.5□□□□□ -0.57
ITGB1-204ENST00000417122 IGKV1D-37A0A075B6S9 117 aa11.49□□□□□ -0.57
ITGB1-204ENST00000417122 A0A0J9YWU9 116 aa11.49□□□□□ -0.57
ITGB1-204ENST00000417122 ANXA7P20073 488 aaKnown RBP11.49□□□□□ -0.57
ITGB1-204ENST00000417122 ZNF90Q03938 601 aa11.49□□□□□ -0.57
ITGB1-204ENST00000417122 LYG2Q86SG7 212 aa11.49□□□□□ -0.57
ITGB1-204ENST00000417122 LCE6AA0A183 80 aa11.48□□□□□ -0.57
ITGB1-204ENST00000417122 BUB3O43684 328 aa11.48□□□□□ -0.57
ITGB1-204ENST00000417122 IFNA21P01568 189 aa11.48□□□□□ -0.57
ITGB1-204ENST00000417122 ZNF688P0C7X2 276 aa11.48□□□□□ -0.57
ITGB1-204ENST00000417122 CNPY1Q3B7I2 92 aa11.48□□□□□ -0.57
ITGB1-204ENST00000417122 C4orf46Q504U0 113 aa11.48□□□□□ -0.57
ITGB1-204ENST00000417122 STHQ8IWL8 128 aa11.48□□□□□ -0.57
ITGB1-204ENST00000417122 PBDC1Q9BVG4 233 aa11.48□□□□□ -0.57
ITGB1-204ENST00000417122 PLA2G10O15496 165 aa11.47□□□□□ -0.57
ITGB1-204ENST00000417122 FABP1P07148 127 aa11.47□□□□□ -0.57
ITGB1-204ENST00000417122 ID3Q02535 119 aa11.47□□□□□ -0.57
ITGB1-204ENST00000417122 SPANXN5Q5MJ07 72 aa11.47□□□□□ -0.57
ITGB1-204ENST00000417122 OR8G2PQ6IF36 304 aa11.47□□□□□ -0.57
ITGB1-204ENST00000417122 SIGLEC15Q6ZMC9 328 aa11.47□□□□□ -0.57
ITGB1-204ENST00000417122 GATAD1Q8WUU5 269 aa11.47□□□□□ -0.57
ITGB1-204ENST00000417122 DYNC2H1Q8NCM8 4307 aaKnown RBP11.46□□□□□ -0.57
ITGB1-204ENST00000417122 PRSS46E5RG02 174 aa11.46□□□□□ -0.57
ITGB1-204ENST00000417122 H3BP45 60 aa11.46□□□□□ -0.57
ITGB1-204ENST00000417122 LYRM1O43325 122 aa11.46□□□□□ -0.57
ITGB1-204ENST00000417122 CA1P00915 261 aaPredicted RBP11.46□□□□□ -0.57
ITGB1-204ENST00000417122 NUP62P37198 522 aaPredicted RBP11.46□□□□□ -0.57
ITGB1-204ENST00000417122 NKX2-1P43699 371 aaPredicted RBP11.46□□□□□ -0.57
ITGB1-204ENST00000417122 POLR2GP62487 172 aaKnown RBP eCLIP11.46□□□□□ -0.57
ITGB1-204ENST00000417122 THAP8Q8NA92 274 aa11.46□□□□□ -0.57
ITGB1-204ENST00000417122 OR4D5Q8NGN0 318 aa11.46□□□□□ -0.57
ITGB1-204ENST00000417122 TRGV9Q99603 122 aa11.46□□□□□ -0.57
ITGB1-204ENST00000417122 RARRES2Q99969 163 aa11.46□□□□□ -0.57
ITGB1-204ENST00000417122 PFDN2Q9UHV9 154 aa11.46□□□□□ -0.57
ITGB1-204ENST00000417122 STRAPQ9Y3F4 350 aaKnown RBP11.46□□□□□ -0.57
ITGB1-204ENST00000417122 LYSTQ99698 3801 aa11.46□□□□□ -0.58
ITGB1-204ENST00000417122 IGKV1OR2-108A0A075B7D4 117 aa11.45□□□□□ -0.58
ITGB1-204ENST00000417122 KNCNA6PVL3 124 aa11.45□□□□□ -0.58
ITGB1-204ENST00000417122 SNRPGP15A8MWD9 76 aa11.45□□□□□ -0.58
ITGB1-204ENST00000417122 LYZP61626 148 aa11.45□□□□□ -0.58
ITGB1-204ENST00000417122 EWSR1Q01844 656 aaKnown RBP eCLIP11.45□□□□□ -0.58
ITGB1-204ENST00000417122 OR2F1Q13607 317 aa11.45□□□□□ -0.58
ITGB1-204ENST00000417122 TRPT1Q86TN4 253 aaKnown RBP11.45□□□□□ -0.58
ITGB1-204ENST00000417122 C20orf85Q9H1P6 137 aa11.45□□□□□ -0.58
ITGB1-204ENST00000417122 NRN1Q9NPD7 142 aa11.45□□□□□ -0.58
ITGB1-204ENST00000417122 ATF4P18848 351 aaPredicted RBP11.44□□□□□ -0.58
ITGB1-204ENST00000417122 PSMG4Q5JS54 123 aa11.44□□□□□ -0.58
ITGB1-204ENST00000417122 TMEM217Q8N7C4 229 aa11.44□□□□□ -0.58
ITGB1-204ENST00000417122 MITD1Q8WV92 249 aa11.44□□□□□ -0.58
ITGB1-204ENST00000417122 PSENENQ9NZ42 101 aa11.44□□□□□ -0.58
ITGB1-204ENST00000417122 RYR2Q92736 4967 aa11.43□□□□□ -0.58
ITGB1-204ENST00000417122 SSSCA1O60232 199 aa11.43□□□□□ -0.58
ITGB1-204ENST00000417122 TCRBP04435 133 aa11.43□□□□□ -0.58
ITGB1-204ENST00000417122 SNRPD3P62318 126 aaKnown RBP11.43□□□□□ -0.58
ITGB1-204ENST00000417122 PMS2P11Q13670 270 aa11.43□□□□□ -0.58
ITGB1-204ENST00000417122 ACTL10Q5JWF8 245 aa11.43□□□□□ -0.58
ITGB1-204ENST00000417122 MORN3Q6PF18 240 aaPredicted RBP11.43□□□□□ -0.58
ITGB1-204ENST00000417122 OR11H2Q8NH07 326 aa11.43□□□□□ -0.58
ITGB1-204ENST00000417122 PPP1R14BQ96C90 147 aa11.43□□□□□ -0.58
ITGB1-204ENST00000417122 RAB40CQ96S21 281 aa11.43□□□□□ -0.58
ITGB1-204ENST00000417122 CCDC32Q9BV29 185 aa11.43□□□□□ -0.58
ITGB1-204ENST00000417122 SEPSECSQ9HD40 501 aaKnown RBP11.43□□□□□ -0.58
ITGB1-204ENST00000417122 AGRNO00468 2067 aa11.43□□□□□ -0.58
ITGB1-204ENST00000417122 SACSQ9NZJ4 4579 aa11.42□□□□□ -0.58
ITGB1-204ENST00000417122 CXorf65A6NEN9 183 aa11.42□□□□□ -0.58
ITGB1-204ENST00000417122 SCGB1D2O95969 90 aa11.42□□□□□ -0.58
ITGB1-204ENST00000417122 CFDP00746 253 aaPredicted RBP11.42□□□□□ -0.58
ITGB1-204ENST00000417122 SPP1P10451 314 aa11.42□□□□□ -0.58
ITGB1-204ENST00000417122 AKR1C1Q04828 323 aa11.42□□□□□ -0.58
ITGB1-204ENST00000417122 IAH1Q2TAA2 248 aaPredicted RBP11.42□□□□□ -0.58
ITGB1-204ENST00000417122 C1orf194Q5T5A4 169 aa11.42□□□□□ -0.58
ITGB1-204ENST00000417122 LINC00299Q6ZSB3 139 aa11.42□□□□□ -0.58
ITGB1-204ENST00000417122 ACOT7LQ6ZUV0 252 aa11.42□□□□□ -0.58
ITGB1-204ENST00000417122 SMIM8Q96KF7 97 aa11.42□□□□□ -0.58
ITGB1-204ENST00000417122 FBXL17Q9UF56 701 aa11.42□□□□□ -0.58
ITGB1-204ENST00000417122 TENM2Q9NT68 2774 aa11.42□□□□□ -0.58
ITGB1-204ENST00000417122 TRAV6A0A075B6T7 132 aa11.41□□□□□ -0.58
ITGB1-204ENST00000417122 PMS2P5A8MQ11 134 aa11.41□□□□□ -0.58
ITGB1-204ENST00000417122 JTBO76095 146 aa11.41□□□□□ -0.58
ITGB1-204ENST00000417122 PAX9P55771 341 aa11.41□□□□□ -0.58
ITGB1-204ENST00000417122 TMEM41BQ5BJD5 291 aa11.41□□□□□ -0.58
ITGB1-204ENST00000417122 ZBTB8BQ8NAP8 495 aaPredicted RBP11.41□□□□□ -0.58
ITGB1-204ENST00000417122 BPIFCQ8NFQ6 507 aa11.41□□□□□ -0.58
ITGB1-204ENST00000417122 GSKIPQ9P0R6 139 aa11.41□□□□□ -0.58
ITGB1-204ENST00000417122 SMCO3A2RU48 225 aa11.4□□□□□ -0.58
ITGB1-204ENST00000417122 NUPR2A6NF83 97 aa11.4□□□□□ -0.58
ITGB1-204ENST00000417122 GIG44P09565 113 aaPredicted RBP11.4□□□□□ -0.58
ITGB1-204ENST00000417122 C4BPBP20851 252 aa11.4□□□□□ -0.58
ITGB1-204ENST00000417122 GATA2P23769 480 aaPredicted RBP11.4□□□□□ -0.58
ITGB1-204ENST00000417122 TMEM182Q6ZP80 229 aaPredicted RBP11.4□□□□□ -0.58
ITGB1-204ENST00000417122 TMEM144Q7Z5S9 345 aa11.4□□□□□ -0.58
ITGB1-204ENST00000417122 OR8I2Q8N0Y5 310 aa11.4□□□□□ -0.58
ITGB1-204ENST00000417122 NUDT15Q9NV35 164 aa11.4□□□□□ -0.58
ITGB1-204ENST00000417122 CCSO14618 274 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms