RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 OR51G1Q8NGK1 321 aa10.39□□□□□ -0.75
PAF1-202ENST00000416728 RNF125Q96EQ8 232 aa10.39□□□□□ -0.75
PAF1-202ENST00000416728 PFDN2Q9UHV9 154 aa10.39□□□□□ -0.75
PAF1-202ENST00000416728 U3KQ87 197 aa10.39□□□□□ -0.75
PAF1-202ENST00000416728 HERC2O95714 4834 aa10.39□□□□□ -0.75
PAF1-202ENST00000416728 CTDSPLO15194 276 aa10.39□□□□□ -0.75
PAF1-202ENST00000416728 HLA-DRB4P13762 266 aa10.39□□□□□ -0.75
PAF1-202ENST00000416728 NKX2-1P43699 371 aaPredicted RBP10.39□□□□□ -0.75
PAF1-202ENST00000416728 CCR6P51684 374 aa10.39□□□□□ -0.75
PAF1-202ENST00000416728 KLF9Q13886 244 aaPredicted RBP10.39□□□□□ -0.75
PAF1-202ENST00000416728 CLVS1Q8IUQ0 354 aaPredicted RBP10.39□□□□□ -0.75
PAF1-202ENST00000416728 LGI3Q8N145 548 aa10.39□□□□□ -0.75
PAF1-202ENST00000416728 DTD1Q8TEA8 209 aa10.39□□□□□ -0.75
PAF1-202ENST00000416728 DIRAS2Q96HU8 199 aa10.39□□□□□ -0.75
PAF1-202ENST00000416728 FAM210AQ96ND0 272 aa10.39□□□□□ -0.75
PAF1-202ENST00000416728 SCGB3A2Q96PL1 93 aa10.39□□□□□ -0.75
PAF1-202ENST00000416728 PBDC1Q9BVG4 233 aa10.39□□□□□ -0.75
PAF1-202ENST00000416728 PRR13Q9NZ81 148 aa10.39□□□□□ -0.75
PAF1-202ENST00000416728 HLA-DRB4X5D2U9 266 aa10.39□□□□□ -0.75
PAF1-202ENST00000416728 ZFP92A6NM28 416 aa10.38□□□□□ -0.75
PAF1-202ENST00000416728 SMCO1Q147U7 214 aa10.38□□□□□ -0.75
PAF1-202ENST00000416728 SPCS2Q15005 226 aa10.38□□□□□ -0.75
PAF1-202ENST00000416728 OR8G2PQ6IF36 304 aa10.38□□□□□ -0.75
PAF1-202ENST00000416728 LINC00336Q6ZUF6 198 aa10.38□□□□□ -0.75
PAF1-202ENST00000416728 GPR141Q7Z602 305 aa10.38□□□□□ -0.75
PAF1-202ENST00000416728 RABL2AQ9UBK7 228 aaPredicted RBP10.38□□□□□ -0.75
PAF1-202ENST00000416728 HSPB7Q9UBY9 170 aa10.38□□□□□ -0.75
PAF1-202ENST00000416728 SCP2D1Q9UJQ7 156 aa10.38□□□□□ -0.75
PAF1-202ENST00000416728 RABL2BQ9UNT1 228 aa10.38□□□□□ -0.75
PAF1-202ENST00000416728 VPS13DQ5THJ4 4388 aa10.37□□□□□ -0.75
PAF1-202ENST00000416728 A0A0B4J2A0 478 aa10.37□□□□□ -0.75
PAF1-202ENST00000416728 ANKRD20A5PA0PJZ0 165 aa10.37□□□□□ -0.75
PAF1-202ENST00000416728 P0DMU3 169 aa10.37□□□□□ -0.75
PAF1-202ENST00000416728 FAM231AP0DMU4 169 aa10.37□□□□□ -0.75
PAF1-202ENST00000416728 FAM231CP0DMU5 169 aa10.37□□□□□ -0.75
PAF1-202ENST00000416728 NDUFAF3Q9BU61 184 aa10.37□□□□□ -0.75
PAF1-202ENST00000416728 RBKSQ9H477 322 aa10.37□□□□□ -0.75
PAF1-202ENST00000416728 SHPKQ9UHJ6 478 aa10.37□□□□□ -0.75
PAF1-202ENST00000416728 IGKV3-20P01619 116 aa10.36□□□□□ -0.75
PAF1-202ENST00000416728 AKR1C4P17516 323 aa10.36□□□□□ -0.75
PAF1-202ENST00000416728 ID1P41134 155 aa10.36□□□□□ -0.75
PAF1-202ENST00000416728 ATP5IP56385 69 aaPredicted RBP10.36□□□□□ -0.75
PAF1-202ENST00000416728 ZNF705AQ6ZN79 300 aaPredicted RBP10.36□□□□□ -0.75
PAF1-202ENST00000416728 LYZL2Q7Z4W2 148 aa10.36□□□□□ -0.75
PAF1-202ENST00000416728 POM121L12Q8N7R1 296 aa10.36□□□□□ -0.75
PAF1-202ENST00000416728 SLC35E1Q96K37 410 aa10.36□□□□□ -0.75
PAF1-202ENST00000416728 LINC00052Q96N35 136 aa10.36□□□□□ -0.75
PAF1-202ENST00000416728 NEU1Q99519 415 aa10.36□□□□□ -0.75
PAF1-202ENST00000416728 MRPS26Q9BYN8 205 aaKnown RBP10.36□□□□□ -0.75
PAF1-202ENST00000416728 MCUBQ9NWR8 336 aa10.36□□□□□ -0.75
PAF1-202ENST00000416728 IGHV3OR16-12A0A075B7B8 117 aa10.35□□□□□ -0.75
PAF1-202ENST00000416728 TMEM189A5PLL7 270 aa10.35□□□□□ -0.75
PAF1-202ENST00000416728 ZNF705FA8MVS1 300 aaPredicted RBP10.35□□□□□ -0.75
PAF1-202ENST00000416728 FABP1P07148 127 aa10.35□□□□□ -0.75
PAF1-202ENST00000416728 ZNF705DP0CH99 300 aaPredicted RBP10.35□□□□□ -0.75
PAF1-202ENST00000416728 ZNF705BP0CI00 300 aaPredicted RBP10.35□□□□□ -0.75
PAF1-202ENST00000416728 SPART-AS1P0CW21 52 aa10.35□□□□□ -0.75
PAF1-202ENST00000416728 ANXA3P12429 323 aa10.35□□□□□ -0.75
PAF1-202ENST00000416728 GPX4P36969 197 aaPredicted RBP10.35□□□□□ -0.75
PAF1-202ENST00000416728 ALDH3B2P48448 385 aa10.35□□□□□ -0.75
PAF1-202ENST00000416728 EMP1P54849 157 aa10.35□□□□□ -0.75
PAF1-202ENST00000416728 LYZP61626 148 aa10.35□□□□□ -0.75
PAF1-202ENST00000416728 SRPXP78539 464 aa10.35□□□□□ -0.75
PAF1-202ENST00000416728 ZNF90Q03938 601 aa10.35□□□□□ -0.75
PAF1-202ENST00000416728 GAMTQ14353 236 aa10.35□□□□□ -0.75
PAF1-202ENST00000416728 GDF5OSQ5U4N7 250 aa10.35□□□□□ -0.75
PAF1-202ENST00000416728 FOXI2Q6ZQN5 318 aa10.35□□□□□ -0.75
PAF1-202ENST00000416728 OR1S1Q8NH92 325 aa10.35□□□□□ -0.75
PAF1-202ENST00000416728 COQ8AQ8NI60 647 aa10.35□□□□□ -0.75
PAF1-202ENST00000416728 SCRT1Q9BWW7 348 aa10.35□□□□□ -0.75
PAF1-202ENST00000416728 WDR12Q9GZL7 423 aaKnown RBP10.35□□□□□ -0.75
PAF1-202ENST00000416728 SAV1Q9H4B6 383 aaPredicted RBP10.35□□□□□ -0.75
PAF1-202ENST00000416728 BATF3Q9NR55 127 aa10.35□□□□□ -0.75
PAF1-202ENST00000416728 CCDC59Q9P031 241 aaKnown RBP10.35□□□□□ -0.75
PAF1-202ENST00000416728 HECTD4Q9Y4D8 3996 aa10.34□□□□□ -0.75
PAF1-202ENST00000416728 IGKV1D-37A0A075B6S9 117 aa10.34□□□□□ -0.75
PAF1-202ENST00000416728 SMIM9A6NGZ8 99 aa10.34□□□□□ -0.75
PAF1-202ENST00000416728 PSMB3P49720 205 aa10.34□□□□□ -0.75
PAF1-202ENST00000416728 FXYD7P58549 80 aa10.34□□□□□ -0.75
PAF1-202ENST00000416728 DEFB1P60022 68 aa10.34□□□□□ -0.75
PAF1-202ENST00000416728 SUPT4H1P63272 117 aaKnown RBP10.34□□□□□ -0.75
PAF1-202ENST00000416728 C1orf194Q5T5A4 169 aa10.34□□□□□ -0.75
PAF1-202ENST00000416728 OR4B1Q8NGF8 309 aa10.34□□□□□ -0.75
PAF1-202ENST00000416728 PPP1R14BQ96C90 147 aa10.34□□□□□ -0.75
PAF1-202ENST00000416728 RSL24D1Q9UHA3 163 aaKnown RBP10.34□□□□□ -0.75
PAF1-202ENST00000416728 PIGBOS1A0A0B4J2F0 54 aa10.33□□□□□ -0.76
PAF1-202ENST00000416728 SNRPGP15A8MWD9 76 aa10.33□□□□□ -0.76
PAF1-202ENST00000416728 DYNC2LI1Q8TCX1 351 aa10.33□□□□□ -0.76
PAF1-202ENST00000416728 RAB2BQ8WUD1 216 aa10.33□□□□□ -0.76
PAF1-202ENST00000416728 CLUHP3Q96NS8 147 aa10.33□□□□□ -0.76
PAF1-202ENST00000416728 RFNGQ9Y644 331 aa10.33□□□□□ -0.76
PAF1-202ENST00000416728 DNAH6Q9C0G6 4158 aa10.32□□□□□ -0.76
PAF1-202ENST00000416728 TEX48A0A1B0GUV7 120 aa10.32□□□□□ -0.76
PAF1-202ENST00000416728 SOCS3O14543 225 aa10.32□□□□□ -0.76
PAF1-202ENST00000416728 RAB11AP62491 216 aa10.32□□□□□ -0.76
PAF1-202ENST00000416728 OR2F1Q13607 317 aa10.32□□□□□ -0.76
PAF1-202ENST00000416728 SPATA31B1PQ5VZV4 182 aa10.32□□□□□ -0.76
PAF1-202ENST00000416728 OR8I2Q8N0Y5 310 aa10.32□□□□□ -0.76
PAF1-202ENST00000416728 ZNF709Q8N972 641 aa10.32□□□□□ -0.76
PAF1-202ENST00000416728 ISLRO14498 428 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms