RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 IGHV1-8P0DP01 117 aa12.84□□□□□ -0.35
PHRF1-203ENST00000416188 MYOD1P15172 320 aa12.84□□□□□ -0.35
PHRF1-203ENST00000416188 GATA3P23771 443 aa12.84□□□□□ -0.35
PHRF1-203ENST00000416188 RHOGP84095 191 aa12.84□□□□□ -0.35
PHRF1-203ENST00000416188 PRCDQ00LT1 54 aa12.84□□□□□ -0.35
PHRF1-203ENST00000416188 OR10W1Q8NGF6 305 aa12.84□□□□□ -0.35
PHRF1-203ENST00000416188 LDLRAD4O15165 306 aa12.83□□□□□ -0.36
PHRF1-203ENST00000416188 MPZP25189 248 aa12.83□□□□□ -0.36
PHRF1-203ENST00000416188 C10orf55Q5SWW7 151 aa12.83□□□□□ -0.36
PHRF1-203ENST00000416188 MRAP2Q96G30 205 aa12.83□□□□□ -0.36
PHRF1-203ENST00000416188 OTORQ9NRC9 128 aa12.83□□□□□ -0.36
PHRF1-203ENST00000416188 IZUMO1RA6ND01 250 aa12.83□□□□□ -0.36
PHRF1-203ENST00000416188 F8VVB4 439 aa12.83□□□□□ -0.36
PHRF1-203ENST00000416188 F8VWA3 439 aa12.83□□□□□ -0.36
PHRF1-203ENST00000416188 HOXA5P20719 270 aa12.83□□□□□ -0.36
PHRF1-203ENST00000416188 MINOS1Q5TGZ0 78 aa12.83□□□□□ -0.36
PHRF1-203ENST00000416188 FOXC2Q99958 501 aa12.83□□□□□ -0.36
PHRF1-203ENST00000416188 SSBP4Q9BWG4 385 aaPredicted RBP12.83□□□□□ -0.36
PHRF1-203ENST00000416188 MINOS1-NBL1R4GNA1 71 aa12.83□□□□□ -0.36
PHRF1-203ENST00000416188 ORMDL3Q8N138 153 aa12.83□□□□□ -0.36
PHRF1-203ENST00000416188 OR13C6PQ8NH95 151 aa12.83□□□□□ -0.36
PHRF1-203ENST00000416188 WDR83OSQ9Y284 106 aa12.83□□□□□ -0.36
PHRF1-203ENST00000416188 NUP210Q8TEM1 1887 aaPredicted RBP12.83□□□□□ -0.36
PHRF1-203ENST00000416188 M0R1W7 72 aa12.83□□□□□ -0.36
PHRF1-203ENST00000416188 PCP4P48539 62 aa12.83□□□□□ -0.36
PHRF1-203ENST00000416188 GBF1Q92538 1859 aa12.82□□□□□ -0.36
PHRF1-203ENST00000416188 LINC01587Q99440 93 aa12.82□□□□□ -0.36
PHRF1-203ENST00000416188 ZGRF1Q86YA3 2104 aa12.82□□□□□ -0.36
PHRF1-203ENST00000416188 PTPRDP23468 1912 aa12.82□□□□□ -0.36
PHRF1-203ENST00000416188 PRB4P10163 310 aaPredicted RBP12.82□□□□□ -0.36
PHRF1-203ENST00000416188 EFNB3Q15768 340 aa12.82□□□□□ -0.36
PHRF1-203ENST00000416188 Q6AWC8 147 aa12.82□□□□□ -0.36
PHRF1-203ENST00000416188 VSIRQ9H7M9 311 aa12.82□□□□□ -0.36
PHRF1-203ENST00000416188 NCOR2Q9Y618 2525 aa12.82□□□□□ -0.36
PHRF1-203ENST00000416188 FABP5P3A8MUU1 101 aa12.82□□□□□ -0.36
PHRF1-203ENST00000416188 EMP1P54849 157 aa12.82□□□□□ -0.36
PHRF1-203ENST00000416188 DPH3Q96FX2 82 aa12.82□□□□□ -0.36
PHRF1-203ENST00000416188 SOX21Q9Y651 276 aaPredicted RBP12.82□□□□□ -0.36
PHRF1-203ENST00000416188 ATP5LO75964 103 aa12.82□□□□□ -0.36
PHRF1-203ENST00000416188 SCGB1A1P11684 91 aa12.82□□□□□ -0.36
PHRF1-203ENST00000416188 PVRIGQ6DKI7 326 aa12.82□□□□□ -0.36
PHRF1-203ENST00000416188 EPDR1Q9UM22 224 aa12.82□□□□□ -0.36
PHRF1-203ENST00000416188 MED13LQ71F56 2210 aa12.82□□□□□ -0.36
PHRF1-203ENST00000416188 HEPN1Q6WQI6 88 aa12.81□□□□□ -0.36
PHRF1-203ENST00000416188 LHFPL1Q86WI0 220 aa12.81□□□□□ -0.36
PHRF1-203ENST00000416188 KIR3DL3Q8N743 410 aa12.81□□□□□ -0.36
PHRF1-203ENST00000416188 LINC00469Q8N7U9 141 aa12.81□□□□□ -0.36
PHRF1-203ENST00000416188 PMCHL2Q9BQD1 86 aa12.81□□□□□ -0.36
PHRF1-203ENST00000416188 FANCMQ8IYD8 2048 aa12.81□□□□□ -0.36
PHRF1-203ENST00000416188 RNF144BQ7Z419 303 aa12.81□□□□□ -0.36
PHRF1-203ENST00000416188 SERF1AO75920 110 aa12.81□□□□□ -0.36
PHRF1-203ENST00000416188 SUPT4H1P63272 117 aaKnown RBP12.81□□□□□ -0.36
PHRF1-203ENST00000416188 C5orf24Q7Z6I8 188 aa12.81□□□□□ -0.36
PHRF1-203ENST00000416188 GTSCR1Q86UQ5 136 aa12.81□□□□□ -0.36
PHRF1-203ENST00000416188 TRAV41A0A0B4J266 112 aa12.8□□□□□ -0.36
PHRF1-203ENST00000416188 SAP30O75446 220 aa12.8□□□□□ -0.36
PHRF1-203ENST00000416188 OCC1Q8TAD7 63 aa12.8□□□□□ -0.36
PHRF1-203ENST00000416188 REG4Q9BYZ8 158 aa12.8□□□□□ -0.36
PHRF1-203ENST00000416188 EP400Q96L91 3159 aa12.8□□□□□ -0.36
PHRF1-203ENST00000416188 A0A1W2PRE2 83 aa12.8□□□□□ -0.36
PHRF1-203ENST00000416188 OOSP1A8MZH6 123 aa12.8□□□□□ -0.36
PHRF1-203ENST00000416188 CD33P20138 364 aa12.8□□□□□ -0.36
PHRF1-203ENST00000416188 LYPD2Q6UXB3 125 aa12.8□□□□□ -0.36
PHRF1-203ENST00000416188 LHFPL4Q7Z7J7 247 aa12.8□□□□□ -0.36
PHRF1-203ENST00000416188 TTC9CQ8N5M4 171 aa12.8□□□□□ -0.36
PHRF1-203ENST00000416188 COPS9Q8WXC6 57 aa12.8□□□□□ -0.36
PHRF1-203ENST00000416188 RNF114Q9Y508 228 aa12.8□□□□□ -0.36
PHRF1-203ENST00000416188 PHF3Q92576 2039 aaKnown RBP12.8□□□□□ -0.36
PHRF1-203ENST00000416188 FGF16O43320 207 aa12.8□□□□□ -0.36
PHRF1-203ENST00000416188 FBLN7Q53RD9 439 aa12.8□□□□□ -0.36
PHRF1-203ENST00000416188 LILRA1O75019 489 aa12.79□□□□□ -0.36
PHRF1-203ENST00000416188 PPIFP30405 207 aaKnown RBP12.79□□□□□ -0.36
PHRF1-203ENST00000416188 CD177Q8N6Q3 437 aa12.79□□□□□ -0.36
PHRF1-203ENST00000416188 TMEM101Q96IK0 257 aa12.79□□□□□ -0.36
PHRF1-203ENST00000416188 TRAV9-1A0A075B6T8 112 aa12.79□□□□□ -0.36
PHRF1-203ENST00000416188 A0A1B0GW15 77 aa12.79□□□□□ -0.36
PHRF1-203ENST00000416188 TMEM50AO95807 157 aa12.79□□□□□ -0.36
PHRF1-203ENST00000416188 TPTE2P1Q5T6R2 138 aa12.79□□□□□ -0.36
PHRF1-203ENST00000416188 IGFL2Q6UWQ7 119 aa12.79□□□□□ -0.36
PHRF1-203ENST00000416188 CD7P09564 240 aa12.79□□□□□ -0.36
PHRF1-203ENST00000416188 SMIM13P0DJ93 91 aa12.79□□□□□ -0.36
PHRF1-203ENST00000416188 HTN3P15516 51 aa12.79□□□□□ -0.36
PHRF1-203ENST00000416188 GRNP28799 593 aaKnown RBP12.79□□□□□ -0.36
PHRF1-203ENST00000416188 SLC50A1Q9BRV3 221 aa12.79□□□□□ -0.36
PHRF1-203ENST00000416188 TRGV2A0A075B6R0 118 aa12.79□□□□□ -0.36
PHRF1-203ENST00000416188 TRAV5A0A0B4J249 113 aa12.79□□□□□ -0.36
PHRF1-203ENST00000416188 MLNRO43193 412 aa12.79□□□□□ -0.36
PHRF1-203ENST00000416188 PRDM13Q9H4Q3 707 aa12.79□□□□□ -0.36
PHRF1-203ENST00000416188 PSG8Q9UQ74 426 aa12.79□□□□□ -0.36
PHRF1-203ENST00000416188 TREML4Q6UXN2 200 aa12.78□□□□□ -0.36
PHRF1-203ENST00000416188 ASCL2Q99929 193 aa12.78□□□□□ -0.36
PHRF1-203ENST00000416188 PNRC2Q9NPJ4 139 aaKnown RBP12.78□□□□□ -0.36
PHRF1-203ENST00000416188 KLF2Q9Y5W3 355 aaPredicted RBP12.78□□□□□ -0.36
PHRF1-203ENST00000416188 DMRTC2Q8IXT2 367 aaPredicted RBP12.78□□□□□ -0.36
PHRF1-203ENST00000416188 GAFA1Q96PS6 74 aa12.78□□□□□ -0.36
PHRF1-203ENST00000416188 TOMM7Q9P0U1 55 aa12.78□□□□□ -0.36
PHRF1-203ENST00000416188 A0A1W2PNU3 283 aaPredicted RBP12.78□□□□□ -0.36
PHRF1-203ENST00000416188 NRN1Q9NPD7 142 aa12.78□□□□□ -0.36
PHRF1-203ENST00000416188 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.77□□□□□ -0.36
PHRF1-203ENST00000416188 DNAL4O96015 105 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms