RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 LSM5Q9Y4Y9 91 aaKnown RBP-0.54□□□□□ -2.5
RNU4-55P-201ENST00000410731 SCN10AQ9Y5Y9 1956 aa-0.54□□□□□ -2.5
RNU4-55P-201ENST00000410731 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.55□□□□□ -2.5
RNU4-55P-201ENST00000410731 SLC16A4O15374 487 aa-0.55□□□□□ -2.5
RNU4-55P-201ENST00000410731 AHSA1O95433 338 aa-0.55□□□□□ -2.5
RNU4-55P-201ENST00000410731 SPINK1P00995 79 aa-0.55□□□□□ -2.5
RNU4-55P-201ENST00000410731 OCM2P0CE71 109 aa-0.55□□□□□ -2.5
RNU4-55P-201ENST00000410731 TCL1AP56279 114 aa-0.55□□□□□ -2.5
RNU4-55P-201ENST00000410731 YPEL3P61236 119 aaPredicted RBP-0.55□□□□□ -2.5
RNU4-55P-201ENST00000410731 CDKL4Q5MAI5 379 aa-0.55□□□□□ -2.5
RNU4-55P-201ENST00000410731 SLC35B4Q969S0 331 aa-0.55□□□□□ -2.5
RNU4-55P-201ENST00000410731 LYSMD1Q96S90 227 aa-0.55□□□□□ -2.5
RNU4-55P-201ENST00000410731 GPER1Q99527 375 aa-0.55□□□□□ -2.5
RNU4-55P-201ENST00000410731 UPF3BQ9BZI7 483 aaKnown RBP-0.55□□□□□ -2.5
RNU4-55P-201ENST00000410731 TNS3Q68CZ2 1445 aa-0.55□□□□□ -2.5
RNU4-55P-201ENST00000410731 NUP155O75694 1391 aa-0.56□□□□□ -2.5
RNU4-55P-201ENST00000410731 HEATR1Q9H583 2144 aaKnown RBP-0.56□□□□□ -2.5
RNU4-55P-201ENST00000410731 SMIM9A6NGZ8 99 aa-0.56□□□□□ -2.5
RNU4-55P-201ENST00000410731 C5orf67F2Z3F1 127 aa-0.56□□□□□ -2.5
RNU4-55P-201ENST00000410731 HIST1H1TP22492 207 aaPredicted RBP-0.56□□□□□ -2.5
RNU4-55P-201ENST00000410731 TSNQ15631 228 aaKnown RBP-0.56□□□□□ -2.5
RNU4-55P-201ENST00000410731 HIST2H3PS2Q5TEC6 136 aa-0.56□□□□□ -2.5
RNU4-55P-201ENST00000410731 FAM9CQ8IZT9 166 aa-0.56□□□□□ -2.5
RNU4-55P-201ENST00000410731 ANKRD29Q8N6D5 301 aa-0.56□□□□□ -2.5
RNU4-55P-201ENST00000410731 OR52E6Q96RD3 313 aa-0.56□□□□□ -2.5
RNU4-55P-201ENST00000410731 TP53RKQ96S44 253 aa-0.56□□□□□ -2.5
RNU4-55P-201ENST00000410731 BCL2L10Q9HD36 194 aa-0.56□□□□□ -2.5
RNU4-55P-201ENST00000410731 UBAP1Q9NZ09 502 aa-0.56□□□□□ -2.5
RNU4-55P-201ENST00000410731 UTP11Q9Y3A2 253 aaKnown RBP-0.56□□□□□ -2.5
RNU4-55P-201ENST00000410731 PTPN13Q12923 2485 aa-0.56□□□□□ -2.5
RNU4-55P-201ENST00000410731 LRRN3E7EW58 273 aa-0.57□□□□□ -2.5
RNU4-55P-201ENST00000410731 PSMD12O00232 456 aaPredicted RBP-0.57□□□□□ -2.5
RNU4-55P-201ENST00000410731 SMIM10L2AP0DMW4 78 aa-0.57□□□□□ -2.5
RNU4-55P-201ENST00000410731 SMIM10L2BP0DMW5 78 aa-0.57□□□□□ -2.5
RNU4-55P-201ENST00000410731 ANP32AP39687 249 aaKnown RBP-0.57□□□□□ -2.5
RNU4-55P-201ENST00000410731 RPS20P60866 119 aaKnown RBP-0.57□□□□□ -2.5
RNU4-55P-201ENST00000410731 PSME3P61289 254 aa-0.57□□□□□ -2.5
RNU4-55P-201ENST00000410731 Q5BKY6 102 aa-0.57□□□□□ -2.5
RNU4-55P-201ENST00000410731 CD200R1LQ6Q8B3 271 aa-0.57□□□□□ -2.5
RNU4-55P-201ENST00000410731 C2orf82Q6UX34 121 aa-0.57□□□□□ -2.5
RNU4-55P-201ENST00000410731 Q8IYB0 196 aa-0.57□□□□□ -2.5
RNU4-55P-201ENST00000410731 TMEM86BQ8N661 226 aa-0.57□□□□□ -2.5
RNU4-55P-201ENST00000410731 OR2T35Q8NGX2 323 aa-0.57□□□□□ -2.5
RNU4-55P-201ENST00000410731 HERC1Q15751 4861 aa-0.57□□□□□ -2.5
RNU4-55P-201ENST00000410731 APC2O95996 2303 aa-0.57□□□□□ -2.5
RNU4-55P-201ENST00000410731 KDM6AO15550 1401 aaPredicted RBP-0.57□□□□□ -2.5
RNU4-55P-201ENST00000410731 CHD3Q12873 2000 aaKnown RBP-0.57□□□□□ -2.5
RNU4-55P-201ENST00000410731 UNC13CQ8NB66 2214 aa-0.58□□□□□ -2.5
RNU4-55P-201ENST00000410731 MYCBP2O75592 4640 aa-0.58□□□□□ -2.5
RNU4-55P-201ENST00000410731 ECM29Q5VYK3 1845 aa-0.58□□□□□ -2.5
RNU4-55P-201ENST00000410731 A0A087X0T9 212 aa-0.58□□□□□ -2.5
RNU4-55P-201ENST00000410731 A0A0A6YYH2 397 aa-0.58□□□□□ -2.5
RNU4-55P-201ENST00000410731 TRBV30A0A0K0K1B3 111 aa-0.58□□□□□ -2.5
RNU4-55P-201ENST00000410731 A6NJ64 397 aa-0.58□□□□□ -2.5
RNU4-55P-201ENST00000410731 ISG15P05161 165 aa-0.58□□□□□ -2.5
RNU4-55P-201ENST00000410731 RPL5P46777 297 aaKnown RBP-0.58□□□□□ -2.5
RNU4-55P-201ENST00000410731 QRFPP83859 136 aa-0.58□□□□□ -2.5
RNU4-55P-201ENST00000410731 GLIPR1L1Q6UWM5 242 aa-0.58□□□□□ -2.5
RNU4-55P-201ENST00000410731 GDPD1Q8N9F7 314 aa-0.58□□□□□ -2.5
RNU4-55P-201ENST00000410731 OR2T10Q8NGZ9 312 aa-0.58□□□□□ -2.5
RNU4-55P-201ENST00000410731 ZC2HC1AQ96GY0 325 aa-0.58□□□□□ -2.5
RNU4-55P-201ENST00000410731 PPP1R2P1Q96PQ5 205 aa-0.58□□□□□ -2.5
RNU4-55P-201ENST00000410731 HIST1H2BLQ99880 126 aa-0.58□□□□□ -2.5
RNU4-55P-201ENST00000410731 DRC3Q9H069 523 aa-0.58□□□□□ -2.5
RNU4-55P-201ENST00000410731 CYSLTR1Q9Y271 337 aa-0.58□□□□□ -2.5
RNU4-55P-201ENST00000410731 ALMS1Q8TCU4 4167 aa-0.58□□□□□ -2.5
RNU4-55P-201ENST00000410731 MED1Q15648 1581 aaPredicted RBP-0.58□□□□□ -2.5
RNU4-55P-201ENST00000410731 CECR2Q9BXF3 1484 aa-0.59□□□□□ -2.5
RNU4-55P-201ENST00000410731 NUPR2A6NF83 97 aa-0.59□□□□□ -2.5
RNU4-55P-201ENST00000410731 H3BRM9 83 aa-0.59□□□□□ -2.5
RNU4-55P-201ENST00000410731 DCTN3O75935 186 aa-0.59□□□□□ -2.5
RNU4-55P-201ENST00000410731 GADD45GO95257 159 aa-0.59□□□□□ -2.5
RNU4-55P-201ENST00000410731 C10orf99Q6UWK7 81 aa-0.59□□□□□ -2.5
RNU4-55P-201ENST00000410731 FAM151BQ6UXP7 276 aa-0.59□□□□□ -2.5
RNU4-55P-201ENST00000410731 ZNF833PQ6ZTB9 187 aa-0.59□□□□□ -2.5
RNU4-55P-201ENST00000410731 WFDC5Q8TCV5 224 aa-0.59□□□□□ -2.5
RNU4-55P-201ENST00000410731 ADAT3Q96EY9 351 aaPredicted RBP-0.59□□□□□ -2.5
RNU4-55P-201ENST00000410731 C9orf84Q5VXU9 1444 aa-0.59□□□□□ -2.5
RNU4-55P-201ENST00000410731 NEO1Q92859 1461 aa-0.6□□□□□ -2.5
RNU4-55P-201ENST00000410731 DOCK5Q9H7D0 1870 aa-0.6□□□□□ -2.51
RNU4-55P-201ENST00000410731 F8W1H4 67 aa-0.6□□□□□ -2.51
RNU4-55P-201ENST00000410731 DEXIO95424 95 aa-0.6□□□□□ -2.51
RNU4-55P-201ENST00000410731 HIST3H3Q16695 136 aa-0.6□□□□□ -2.51
RNU4-55P-201ENST00000410731 KRTAP19-7Q3SYF9 63 aa-0.6□□□□□ -2.51
RNU4-55P-201ENST00000410731 SPATA45Q537H7 98 aa-0.6□□□□□ -2.51
RNU4-55P-201ENST00000410731 ATP6V1G3Q96LB4 118 aa-0.6□□□□□ -2.51
RNU4-55P-201ENST00000410731 TMEM138Q9NPI0 162 aa-0.6□□□□□ -2.51
RNU4-55P-201ENST00000410731 U3KQA8 63 aa-0.6□□□□□ -2.51
RNU4-55P-201ENST00000410731 DCHS2Q6V1P9 2916 aa-0.61□□□□□ -2.51
RNU4-55P-201ENST00000410731 SPTBP11277 2137 aa-0.61□□□□□ -2.51
RNU4-55P-201ENST00000410731 CRYZL1O95825 349 aa-0.61□□□□□ -2.51
RNU4-55P-201ENST00000410731 CD3DP04234 171 aa-0.61□□□□□ -2.51
RNU4-55P-201ENST00000410731 CD79AP11912 226 aa-0.61□□□□□ -2.51
RNU4-55P-201ENST00000410731 CCL4P13236 92 aa-0.61□□□□□ -2.51
RNU4-55P-201ENST00000410731 CASP1P29466 404 aa-0.61□□□□□ -2.51
RNU4-55P-201ENST00000410731 AP2S1P53680 142 aaPredicted RBP-0.61□□□□□ -2.51
RNU4-55P-201ENST00000410731 SPOPLQ6IQ16 392 aa-0.61□□□□□ -2.51
RNU4-55P-201ENST00000410731 TEN1Q86WV5 123 aa-0.61□□□□□ -2.51
RNU4-55P-201ENST00000410731 SLAMF6Q96DU3 332 aa-0.61□□□□□ -2.51
RNU4-55P-201ENST00000410731 IDI2-AS1Q9NZ38 188 aa-0.61□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms