RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 A0A0D9SG42 100 aa0.05□□□□□ -2.4
PMS1-203ENST00000409593 B4DSR2 109 aa0.05□□□□□ -2.4
PMS1-203ENST00000409593 PIRO00625 290 aa0.05□□□□□ -2.4
PMS1-203ENST00000409593 KLF7O75840 302 aaPredicted RBP0.05□□□□□ -2.4
PMS1-203ENST00000409593 DEFA3P59666 94 aa0.05□□□□□ -2.4
PMS1-203ENST00000409593 CIRBPQ14011 172 aaKnown RBP0.05□□□□□ -2.4
PMS1-203ENST00000409593 TSNQ15631 228 aaKnown RBP0.05□□□□□ -2.4
PMS1-203ENST00000409593 C14orf105Q9NVL8 296 aa0.05□□□□□ -2.4
PMS1-203ENST00000409593 KIAA1549Q9HCM3 1950 aa0.04□□□□□ -2.4
PMS1-203ENST00000409593 PIK3C2GO75747 1445 aa0.04□□□□□ -2.4
PMS1-203ENST00000409593 hADV38S2A0JD32 116 aa0.04□□□□□ -2.4
PMS1-203ENST00000409593 KPNA3O00505 521 aaPredicted RBP0.04□□□□□ -2.4
PMS1-203ENST00000409593 LYPLA2O95372 231 aa0.04□□□□□ -2.4
PMS1-203ENST00000409593 RBP1P09455 135 aa0.04□□□□□ -2.4
PMS1-203ENST00000409593 HOXA6P31267 233 aa0.04□□□□□ -2.4
PMS1-203ENST00000409593 DYNLT1P63172 113 aa0.04□□□□□ -2.4
PMS1-203ENST00000409593 KRTAP26-1Q6PEX3 210 aa0.04□□□□□ -2.4
PMS1-203ENST00000409593 LINC00322Q6ZN03 302 aaPredicted RBP0.04□□□□□ -2.4
PMS1-203ENST00000409593 TRAPPC6BQ86SZ2 158 aa0.04□□□□□ -2.4
PMS1-203ENST00000409593 GDPD1Q8N9F7 314 aa0.04□□□□□ -2.4
PMS1-203ENST00000409593 OR11H6Q8NGC7 330 aa0.04□□□□□ -2.4
PMS1-203ENST00000409593 DCUN1D1Q96GG9 259 aa0.04□□□□□ -2.4
PMS1-203ENST00000409593 HIST1H2BLQ99880 126 aa0.04□□□□□ -2.4
PMS1-203ENST00000409593 RNF122Q9H9V4 155 aa0.04□□□□□ -2.4
PMS1-203ENST00000409593 BCL2L10Q9HD36 194 aa0.04□□□□□ -2.4
PMS1-203ENST00000409593 IDI2-AS1Q9NZ38 188 aa0.04□□□□□ -2.4
PMS1-203ENST00000409593 TMEM14CQ9P0S9 112 aa0.04□□□□□ -2.4
PMS1-203ENST00000409593 UTP11Q9Y3A2 253 aaKnown RBP0.04□□□□□ -2.4
PMS1-203ENST00000409593 MYO3BQ8WXR4 1341 aa0.04□□□□□ -2.4
PMS1-203ENST00000409593 ADCY9O60503 1353 aa0.04□□□□□ -2.4
PMS1-203ENST00000409593 PLXNA4Q9HCM2 1894 aa0.03□□□□□ -2.4
PMS1-203ENST00000409593 A0A087X0T9 212 aa0.03□□□□□ -2.4
PMS1-203ENST00000409593 C7orf71A4D174 169 aa0.03□□□□□ -2.4
PMS1-203ENST00000409593 SMIM9A6NGZ8 99 aa0.03□□□□□ -2.4
PMS1-203ENST00000409593 C1orf196B1AJZ1 125 aa0.03□□□□□ -2.4
PMS1-203ENST00000409593 M0R036 132 aa0.03□□□□□ -2.4
PMS1-203ENST00000409593 GADD45GO95257 159 aa0.03□□□□□ -2.4
PMS1-203ENST00000409593 S100A4P26447 101 aaKnown RBP0.03□□□□□ -2.4
PMS1-203ENST00000409593 ROMO1P60602 79 aa0.03□□□□□ -2.4
PMS1-203ENST00000409593 YPEL3P61236 119 aaPredicted RBP0.03□□□□□ -2.4
PMS1-203ENST00000409593 LSM6P62312 80 aaKnown RBP0.03□□□□□ -2.4
PMS1-203ENST00000409593 IAH1Q2TAA2 248 aaPredicted RBP0.03□□□□□ -2.4
PMS1-203ENST00000409593 SPINK9Q5DT21 86 aa0.03□□□□□ -2.4
PMS1-203ENST00000409593 CCDC122Q5T0U0 273 aa0.03□□□□□ -2.4
PMS1-203ENST00000409593 KRT222Q8N1A0 295 aa0.03□□□□□ -2.4
PMS1-203ENST00000409593 OR8J2Q8NGG1 315 aa0.03□□□□□ -2.4
PMS1-203ENST00000409593 OR52L1Q8NGH7 329 aa0.03□□□□□ -2.4
PMS1-203ENST00000409593 SLAMF6Q96DU3 332 aa0.03□□□□□ -2.4
PMS1-203ENST00000409593 C14orf132Q9NPU4 83 aa0.03□□□□□ -2.4
PMS1-203ENST00000409593 NHP2Q9NX24 153 aaKnown RBP0.03□□□□□ -2.4
PMS1-203ENST00000409593 TAS2R7Q9NYW3 318 aa0.03□□□□□ -2.4
PMS1-203ENST00000409593 PLAC8Q9NZF1 115 aa0.03□□□□□ -2.4
PMS1-203ENST00000409593 NOSIPQ9Y314 301 aaKnown RBP0.03□□□□□ -2.4
PMS1-203ENST00000409593 PRELID3BQ9Y3B1 194 aa0.03□□□□□ -2.4
PMS1-203ENST00000409593 KMT2CQ8NEZ4 4911 aaKnown RBP0.03□□□□□ -2.4
PMS1-203ENST00000409593 CITO14578 2027 aa0.03□□□□□ -2.4
PMS1-203ENST00000409593 MUC12Q9UKN1 5478 aa0.03□□□□□ -2.4
PMS1-203ENST00000409593 CCDC144AA2RUR9 1427 aa0.03□□□□□ -2.41
PMS1-203ENST00000409593 TAF1LQ8IZX4 1826 aa0.03□□□□□ -2.41
PMS1-203ENST00000409593 TNCP24821 2201 aa0.03□□□□□ -2.41
PMS1-203ENST00000409593 hCG_1818297A0A087WSY0 165 aa0.02□□□□□ -2.41
PMS1-203ENST00000409593 IGHV1-58A0A0C4DH39 117 aa0.02□□□□□ -2.41
PMS1-203ENST00000409593 A8MT66 165 aa0.02□□□□□ -2.41
PMS1-203ENST00000409593 DHFRP00374 187 aa0.02□□□□□ -2.41
PMS1-203ENST00000409593 TCRBP04435 133 aa0.02□□□□□ -2.41
PMS1-203ENST00000409593 RPS17P08708 135 aaKnown RBP0.02□□□□□ -2.41
PMS1-203ENST00000409593 SMIM17P0DL12 118 aa0.02□□□□□ -2.41
PMS1-203ENST00000409593 CASP1P29466 404 aa0.02□□□□□ -2.41
PMS1-203ENST00000409593 GRINAQ7Z429 371 aa0.02□□□□□ -2.41
PMS1-203ENST00000409593 SLC25A40Q8TBP6 338 aa0.02□□□□□ -2.41
PMS1-203ENST00000409593 STAG3L4Q8TBR4 150 aa0.02□□□□□ -2.41
PMS1-203ENST00000409593 TEX47Q8TBZ9 253 aa0.02□□□□□ -2.41
PMS1-203ENST00000409593 CT55Q8WUE5 264 aa0.02□□□□□ -2.41
PMS1-203ENST00000409593 LINC00052Q96N35 136 aa0.02□□□□□ -2.41
PMS1-203ENST00000409593 UQCC1Q9NVA1 299 aa0.02□□□□□ -2.41
PMS1-203ENST00000409593 ANKHD1Q8IWZ3 2542 aaKnown RBP0.02□□□□□ -2.41
PMS1-203ENST00000409593 TET1Q8NFU7 2136 aa0.02□□□□□ -2.41
PMS1-203ENST00000409593 TLCD2A6NGC4 264 aa0.02□□□□□ -2.41
PMS1-203ENST00000409593 K7EIL1 84 aa0.02□□□□□ -2.41
PMS1-203ENST00000409593 NUPR1O60356 82 aa0.02□□□□□ -2.41
PMS1-203ENST00000409593 NIPSNAP2O75323 286 aa0.02□□□□□ -2.41
PMS1-203ENST00000409593 SERPINE1P05121 402 aa0.02□□□□□ -2.41
PMS1-203ENST00000409593 Q6Q795 121 aa0.02□□□□□ -2.41
PMS1-203ENST00000409593 ZNF833PQ6ZTB9 187 aa0.02□□□□□ -2.41
PMS1-203ENST00000409593 OR2T10Q8NGZ9 312 aa0.02□□□□□ -2.41
PMS1-203ENST00000409593 ITFG2Q969R8 447 aa0.02□□□□□ -2.41
PMS1-203ENST00000409593 C2orf50Q96LR7 162 aa0.02□□□□□ -2.41
PMS1-203ENST00000409593 CCDC42Q96M95 316 aa0.02□□□□□ -2.41
PMS1-203ENST00000409593 PRADC1Q9BSG0 188 aa0.02□□□□□ -2.41
PMS1-203ENST00000409593 CCDC90BQ9GZT6 254 aa0.02□□□□□ -2.41
PMS1-203ENST00000409593 C6orf62Q9GZU0 229 aaPredicted RBP0.02□□□□□ -2.41
PMS1-203ENST00000409593 TMEM126AQ9H061 195 aa0.02□□□□□ -2.41
PMS1-203ENST00000409593 PSTPIP2Q9H939 334 aa0.02□□□□□ -2.41
PMS1-203ENST00000409593 SCN10AQ9Y5Y9 1956 aa0.01□□□□□ -2.41
PMS1-203ENST00000409593 HEATR1Q9H583 2144 aaKnown RBP0.01□□□□□ -2.41
PMS1-203ENST00000409593 CECR2Q9BXF3 1484 aa0.01□□□□□ -2.41
PMS1-203ENST00000409593 UNC13CQ8NB66 2214 aa0.01□□□□□ -2.41
PMS1-203ENST00000409593 TCRBV4S1A1TA0A5B7 111 aa0.01□□□□□ -2.41
PMS1-203ENST00000409593 M0R378 163 aa0.01□□□□□ -2.41
PMS1-203ENST00000409593 CYB5BO43169 146 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms