RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 LOC102724200A0A096LPH7 203 aaPredicted RBP20.54■□□□□ 0.88
SPIRE1-202ENST00000409402 FOXL2NBQ6ZUU3 175 aa20.54■□□□□ 0.88
SPIRE1-202ENST00000409402 SAA4P35542 130 aa20.54■□□□□ 0.88
SPIRE1-202ENST00000409402 PRADC1Q9BSG0 188 aa20.54■□□□□ 0.88
SPIRE1-202ENST00000409402 A0A087WWC5 75 aa20.54■□□□□ 0.88
SPIRE1-202ENST00000409402 SELENOKQ9Y6D0 94 aa20.53■□□□□ 0.88
SPIRE1-202ENST00000409402 TRBV6-6A0A0A6YYG2 114 aa20.53■□□□□ 0.88
SPIRE1-202ENST00000409402 PRTN3P24158 256 aa20.53■□□□□ 0.88
SPIRE1-202ENST00000409402 LY6G6EA0A0G2JKS1 128 aa20.53■□□□□ 0.88
SPIRE1-202ENST00000409402 CHCHD5Q9BSY4 110 aa20.53■□□□□ 0.88
SPIRE1-202ENST00000409402 U3KQA8 63 aa20.53■□□□□ 0.88
SPIRE1-202ENST00000409402 ESPL1Q14674 2120 aa20.53■□□□□ 0.88
SPIRE1-202ENST00000409402 C5orf63A6NC05 138 aa20.53■□□□□ 0.88
SPIRE1-202ENST00000409402 F2Z2F3 143 aa20.53■□□□□ 0.88
SPIRE1-202ENST00000409402 TTC9CQ8N5M4 171 aa20.53■□□□□ 0.88
SPIRE1-202ENST00000409402 RBMY1BA6NDE4 496 aaKnown RBP20.53■□□□□ 0.88
SPIRE1-202ENST00000409402 RBMY1EA6NEQ0 496 aaKnown RBP20.53■□□□□ 0.88
SPIRE1-202ENST00000409402 RBMY1DP0C7P1 496 aaKnown RBP20.53■□□□□ 0.88
SPIRE1-202ENST00000409402 RBMY1A1P0DJD3 496 aaKnown RBP20.53■□□□□ 0.88
SPIRE1-202ENST00000409402 RBMY1CP0DJD4 496 aa20.53■□□□□ 0.88
SPIRE1-202ENST00000409402 LY6G6FQ5SQ64 297 aa20.53■□□□□ 0.88
SPIRE1-202ENST00000409402 TRGV9Q99603 122 aa20.53■□□□□ 0.88
SPIRE1-202ENST00000409402 TRAV5A0A0B4J249 113 aa20.52■□□□□ 0.88
SPIRE1-202ENST00000409402 PPIFP30405 207 aaKnown RBP20.52■□□□□ 0.88
SPIRE1-202ENST00000409402 SRSF1Q07955 248 aaKnown RBP eCLIP20.52■□□□□ 0.88
SPIRE1-202ENST00000409402 SLC25A39Q9BZJ4 359 aaPredicted RBP20.52■□□□□ 0.88
SPIRE1-202ENST00000409402 OSTCQ9NRP0 149 aa20.52■□□□□ 0.88
SPIRE1-202ENST00000409402 NDUFA3O95167 84 aa20.52■□□□□ 0.88
SPIRE1-202ENST00000409402 ZNF329Q86UD4 541 aa20.52■□□□□ 0.88
SPIRE1-202ENST00000409402 K7ERU9 68 aa20.52■□□□□ 0.87
SPIRE1-202ENST00000409402 COQ2Q96H96 371 aa20.52■□□□□ 0.87
SPIRE1-202ENST00000409402 PMS2P5A8MQ11 134 aa20.51■□□□□ 0.87
SPIRE1-202ENST00000409402 SMIM13P0DJ93 91 aa20.51■□□□□ 0.87
SPIRE1-202ENST00000409402 COTL1Q14019 142 aa20.51■□□□□ 0.87
SPIRE1-202ENST00000409402 SIGLEC9Q9Y336 463 aa20.51■□□□□ 0.87
SPIRE1-202ENST00000409402 HGFACQ04756 655 aa20.51■□□□□ 0.87
SPIRE1-202ENST00000409402 FNDC1Q4ZHG4 1894 aaPredicted RBP20.51■□□□□ 0.87
SPIRE1-202ENST00000409402 TCF21O43680 179 aa20.51■□□□□ 0.87
SPIRE1-202ENST00000409402 RCHY1Q96PM5 261 aa20.51■□□□□ 0.87
SPIRE1-202ENST00000409402 C9orf139Q6ZV77 190 aa20.51■□□□□ 0.87
SPIRE1-202ENST00000409402 KIR3DL3Q8N743 410 aa20.51■□□□□ 0.87
SPIRE1-202ENST00000409402 CACNA1GO43497 2377 aa20.5■□□□□ 0.87
SPIRE1-202ENST00000409402 PPBPP02775 128 aa20.5■□□□□ 0.87
SPIRE1-202ENST00000409402 IGKV3D-20A0A0C4DH25 116 aa20.5■□□□□ 0.87
SPIRE1-202ENST00000409402 RPL35AP18077 110 aaKnown RBP20.5■□□□□ 0.87
SPIRE1-202ENST00000409402 LHFPL1Q86WI0 220 aa20.5■□□□□ 0.87
SPIRE1-202ENST00000409402 ZNF688P0C7X2 276 aa20.5■□□□□ 0.87
SPIRE1-202ENST00000409402 PLP1P60201 277 aa20.5■□□□□ 0.87
SPIRE1-202ENST00000409402 KLF17Q5JT82 389 aaPredicted RBP20.5■□□□□ 0.87
SPIRE1-202ENST00000409402 CYSLTR1Q9Y271 337 aa20.5■□□□□ 0.87
SPIRE1-202ENST00000409402 Q96MF0 132 aa20.5■□□□□ 0.87
SPIRE1-202ENST00000409402 ZSWIM8A7E2V4 1837 aa20.5■□□□□ 0.87
SPIRE1-202ENST00000409402 LDLRAD4O15165 306 aa20.49■□□□□ 0.87
SPIRE1-202ENST00000409402 GGTLC1Q9BX51 225 aa20.49■□□□□ 0.87
SPIRE1-202ENST00000409402 SEPSECSQ9HD40 501 aaKnown RBP20.49■□□□□ 0.87
SPIRE1-202ENST00000409402 IGKV2-40A0A087WW87 121 aaPredicted RBP20.49■□□□□ 0.87
SPIRE1-202ENST00000409402 IGKV2D-40P01614 121 aaPredicted RBP20.49■□□□□ 0.87
SPIRE1-202ENST00000409402 SCRT1Q9BWW7 348 aa20.49■□□□□ 0.87
SPIRE1-202ENST00000409402 TRBV7-9A0A0J9YWB2 115 aa20.49■□□□□ 0.87
SPIRE1-202ENST00000409402 LHFPL4Q7Z7J7 247 aa20.49■□□□□ 0.87
SPIRE1-202ENST00000409402 H0YIZ8 118 aa20.49■□□□□ 0.87
SPIRE1-202ENST00000409402 PRSS33Q8NF86 280 aa20.49■□□□□ 0.87
SPIRE1-202ENST00000409402 JKAMPQ9P055 326 aa20.49■□□□□ 0.87
SPIRE1-202ENST00000409402 TRAV3A0A0B4J244 114 aa20.48■□□□□ 0.87
SPIRE1-202ENST00000409402 C1QTNF4Q9BXJ3 329 aa20.48■□□□□ 0.87
SPIRE1-202ENST00000409402 ADARB2-AS1A8MUL3 147 aa20.48■□□□□ 0.87
SPIRE1-202ENST00000409402 ACTL10Q5JWF8 245 aa20.48■□□□□ 0.87
SPIRE1-202ENST00000409402 NPIPB5A8MRT5 1133 aa20.48■□□□□ 0.87
SPIRE1-202ENST00000409402 ORMDL2Q53FV1 153 aa20.48■□□□□ 0.87
SPIRE1-202ENST00000409402 NXT2Q9NPJ8 142 aaKnown RBP20.48■□□□□ 0.87
SPIRE1-202ENST00000409402 MRPL16Q9NX20 251 aaKnown RBP20.48■□□□□ 0.87
SPIRE1-202ENST00000409402 NDPQ00604 133 aa20.47■□□□□ 0.87
SPIRE1-202ENST00000409402 CD28P10747 220 aa20.47■□□□□ 0.87
SPIRE1-202ENST00000409402 NUDT10Q8NFP7 164 aa20.47■□□□□ 0.87
SPIRE1-202ENST00000409402 WFDC1Q9HC57 220 aa20.47■□□□□ 0.87
SPIRE1-202ENST00000409402 PEF1Q9UBV8 284 aaKnown RBP20.47■□□□□ 0.87
SPIRE1-202ENST00000409402 SSBP4Q9BWG4 385 aaPredicted RBP20.47■□□□□ 0.87
SPIRE1-202ENST00000409402 VWA8A3KMH1 1905 aa20.46■□□□□ 0.87
SPIRE1-202ENST00000409402 ACACAQ13085 2346 aa20.46■□□□□ 0.87
SPIRE1-202ENST00000409402 UBE2E1P51965 193 aa20.46■□□□□ 0.87
SPIRE1-202ENST00000409402 RPRMLQ8N4K4 120 aa20.46■□□□□ 0.87
SPIRE1-202ENST00000409402 ANK1P16157 1881 aa20.46■□□□□ 0.87
SPIRE1-202ENST00000409402 RUSC1-AS1Q66K80 236 aa20.45■□□□□ 0.86
SPIRE1-202ENST00000409402 DTX1Q86Y01 620 aa20.45■□□□□ 0.86
SPIRE1-202ENST00000409402 A0A087WX48 190 aa20.45■□□□□ 0.86
SPIRE1-202ENST00000409402 NCOR1O75376 2440 aa20.45■□□□□ 0.86
SPIRE1-202ENST00000409402 MBD3L1Q8WWY6 194 aa20.45■□□□□ 0.86
SPIRE1-202ENST00000409402 LINC00473A8K010 186 aa20.44■□□□□ 0.86
SPIRE1-202ENST00000409402 IGKV1-5P01602 117 aa20.44■□□□□ 0.86
SPIRE1-202ENST00000409402 SIP14410 1827 aa20.44■□□□□ 0.86
SPIRE1-202ENST00000409402 DDTP30046 118 aa20.44■□□□□ 0.86
SPIRE1-202ENST00000409402 CEACAM8P31997 349 aaPredicted RBP20.44■□□□□ 0.86
SPIRE1-202ENST00000409402 VSIRQ9H7M9 311 aa20.44■□□□□ 0.86
SPIRE1-202ENST00000409402 TRGV1A0A0A0MS02 117 aa20.44■□□□□ 0.86
SPIRE1-202ENST00000409402 OCC1Q8TAD7 63 aa20.44■□□□□ 0.86
SPIRE1-202ENST00000409402 STAG3L3P0CL85 134 aa20.43■□□□□ 0.86
SPIRE1-202ENST00000409402 ZNF138P52744 262 aa20.43■□□□□ 0.86
SPIRE1-202ENST00000409402 TSKUQ8WUA8 353 aa20.43■□□□□ 0.86
SPIRE1-202ENST00000409402 FCN3O75636 299 aa20.43■□□□□ 0.86
SPIRE1-202ENST00000409402 EXOC3-AS1Q8N2X6 119 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms