RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 C2CD3Q4AC94 2353 aa10.57□□□□□ -0.72
PTPRN-202ENST00000409251 TAS2R45P59539 299 aa10.57□□□□□ -0.72
PTPRN-202ENST00000409251 GDF5OSQ5U4N7 250 aa10.57□□□□□ -0.72
PTPRN-202ENST00000409251 WDR31Q8NA23 367 aa10.57□□□□□ -0.72
PTPRN-202ENST00000409251 PRSS3P2Q8NHM4 247 aa10.57□□□□□ -0.72
PTPRN-202ENST00000409251 COQ2Q96H96 371 aa10.57□□□□□ -0.72
PTPRN-202ENST00000409251 THYN1Q9P016 225 aa10.57□□□□□ -0.72
PTPRN-202ENST00000409251 TRGV10A0A0A0MS01 117 aa10.57□□□□□ -0.72
PTPRN-202ENST00000409251 SS18L1O75177 396 aaPredicted RBP10.57□□□□□ -0.72
PTPRN-202ENST00000409251 MOSP00540 346 aa10.57□□□□□ -0.72
PTPRN-202ENST00000409251 HIST1H1EP10412 219 aaKnown RBP10.57□□□□□ -0.72
PTPRN-202ENST00000409251 MSMPQ1L6U9 139 aa10.57□□□□□ -0.72
PTPRN-202ENST00000409251 TMEM177Q53S58 311 aa10.57□□□□□ -0.72
PTPRN-202ENST00000409251 MRPL52Q86TS9 123 aaKnown RBP10.57□□□□□ -0.72
PTPRN-202ENST00000409251 OR4F17Q8NGA8 305 aa10.57□□□□□ -0.72
PTPRN-202ENST00000409251 TMEM167BQ9NRX6 74 aa10.57□□□□□ -0.72
PTPRN-202ENST00000409251 TRBV9A0A0B4J1U6 114 aa10.57□□□□□ -0.72
PTPRN-202ENST00000409251 IZUMO1RA6ND01 250 aa10.57□□□□□ -0.72
PTPRN-202ENST00000409251 GPR183P32249 361 aa10.57□□□□□ -0.72
PTPRN-202ENST00000409251 IGHV1-18A0A0C4DH31 117 aa10.56□□□□□ -0.72
PTPRN-202ENST00000409251 PGPA6NDG6 321 aa10.56□□□□□ -0.72
PTPRN-202ENST00000409251 K7EP13 123 aa10.56□□□□□ -0.72
PTPRN-202ENST00000409251 IGHG3P01860 377 aa10.56□□□□□ -0.72
PTPRN-202ENST00000409251 TBR1Q16650 682 aa10.56□□□□□ -0.72
PTPRN-202ENST00000409251 RTL8BQ17RB0 113 aa10.56□□□□□ -0.72
PTPRN-202ENST00000409251 GTF2H5Q6ZYL4 71 aa10.56□□□□□ -0.72
PTPRN-202ENST00000409251 TOMM40O96008 361 aa10.56□□□□□ -0.72
PTPRN-202ENST00000409251 LRRC10Q5BKY1 277 aa10.56□□□□□ -0.72
PTPRN-202ENST00000409251 Q8N7P7 452 aa10.56□□□□□ -0.72
PTPRN-202ENST00000409251 PERPQ96FX8 193 aa10.56□□□□□ -0.72
PTPRN-202ENST00000409251 OR2V2Q96R30 315 aa10.56□□□□□ -0.72
PTPRN-202ENST00000409251 SYS1-DBNDD2H3BUS1 97 aa10.56□□□□□ -0.72
PTPRN-202ENST00000409251 MPDU1O75352 247 aa10.56□□□□□ -0.72
PTPRN-202ENST00000409251 DUTP33316 252 aaKnown RBP10.56□□□□□ -0.72
PTPRN-202ENST00000409251 CCL8P80075 99 aa10.56□□□□□ -0.72
PTPRN-202ENST00000409251 SFTA2Q6UW10 78 aa10.56□□□□□ -0.72
PTPRN-202ENST00000409251 C18orf15Q96N68 181 aa10.56□□□□□ -0.72
PTPRN-202ENST00000409251 PEF1Q9UBV8 284 aaKnown RBP10.56□□□□□ -0.72
PTPRN-202ENST00000409251 OR51B2Q9Y5P1 312 aa10.56□□□□□ -0.72
PTPRN-202ENST00000409251 PTPN13Q12923 2485 aa10.55□□□□□ -0.72
PTPRN-202ENST00000409251 GCSHP23434 173 aa10.55□□□□□ -0.72
PTPRN-202ENST00000409251 C10orf55Q5SWW7 151 aa10.55□□□□□ -0.72
PTPRN-202ENST00000409251 PRRG2O14669 202 aa10.55□□□□□ -0.72
PTPRN-202ENST00000409251 Q8TCH9 128 aa10.55□□□□□ -0.72
PTPRN-202ENST00000409251 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.54□□□□□ -0.72
PTPRN-202ENST00000409251 P01737 135 aa10.54□□□□□ -0.72
PTPRN-202ENST00000409251 MOGAT3Q86VF5 341 aa10.54□□□□□ -0.72
PTPRN-202ENST00000409251 PAXXQ9BUH6 204 aa10.54□□□□□ -0.72
PTPRN-202ENST00000409251 OSTCQ9NRP0 149 aa10.54□□□□□ -0.72
PTPRN-202ENST00000409251 FAM90A27PA6NNH2 459 aa10.54□□□□□ -0.72
PTPRN-202ENST00000409251 COL8A1P27658 744 aa10.54□□□□□ -0.72
PTPRN-202ENST00000409251 MEF2CQ06413 473 aaPredicted RBP10.54□□□□□ -0.72
PTPRN-202ENST00000409251 HCP5Q6MZN7 132 aa10.54□□□□□ -0.72
PTPRN-202ENST00000409251 Q6ZS92 163 aa10.54□□□□□ -0.72
PTPRN-202ENST00000409251 LCNL1Q6ZST4 164 aa10.54□□□□□ -0.72
PTPRN-202ENST00000409251 FA2HQ7L5A8 372 aa10.54□□□□□ -0.72
PTPRN-202ENST00000409251 TMUB1Q9BVT8 246 aa10.54□□□□□ -0.72
PTPRN-202ENST00000409251 FER1L6-AS1Q8NA97 138 aa10.54□□□□□ -0.72
PTPRN-202ENST00000409251 NPIPB3Q92617 1050 aa10.54□□□□□ -0.72
PTPRN-202ENST00000409251 SMIM12Q96EX1 92 aa10.54□□□□□ -0.72
PTPRN-202ENST00000409251 IGHV1-24A0A0C4DH33 117 aa10.53□□□□□ -0.72
PTPRN-202ENST00000409251 ENSAO43768 121 aaKnown RBP10.53□□□□□ -0.72
PTPRN-202ENST00000409251 LY6DQ14210 128 aa10.53□□□□□ -0.72
PTPRN-202ENST00000409251 Q6ZSR3 168 aa10.53□□□□□ -0.72
PTPRN-202ENST00000409251 OR4S2Q8NH73 311 aa10.53□□□□□ -0.72
PTPRN-202ENST00000409251 RAB1CQ92928 201 aa10.53□□□□□ -0.72
PTPRN-202ENST00000409251 POLQO75417 2590 aa10.53□□□□□ -0.72
PTPRN-202ENST00000409251 C8orf88P0DMB2 117 aa10.53□□□□□ -0.72
PTPRN-202ENST00000409251 SSBP2P81877 361 aaPredicted RBP10.53□□□□□ -0.72
PTPRN-202ENST00000409251 KRTAP27-1Q3LI81 207 aa10.53□□□□□ -0.72
PTPRN-202ENST00000409251 DUX4L9Q6RFH8 374 aaPredicted RBP10.53□□□□□ -0.72
PTPRN-202ENST00000409251 PNKDQ8N490 385 aa10.53□□□□□ -0.72
PTPRN-202ENST00000409251 COMMD5Q9GZQ3 224 aa10.53□□□□□ -0.72
PTPRN-202ENST00000409251 IGHV3-72A0A0B4J1Y9 119 aa10.53□□□□□ -0.72
PTPRN-202ENST00000409251 hADV38S2A0JD32 116 aa10.53□□□□□ -0.72
PTPRN-202ENST00000409251 C9JCJ5 164 aa10.53□□□□□ -0.72
PTPRN-202ENST00000409251 ESDP10768 282 aa10.53□□□□□ -0.72
PTPRN-202ENST00000409251 ZNF134P52741 427 aa10.53□□□□□ -0.72
PTPRN-202ENST00000409251 INO80CQ6PI98 192 aaPredicted RBP10.53□□□□□ -0.72
PTPRN-202ENST00000409251 PRNTQ86SH4 94 aa10.53□□□□□ -0.72
PTPRN-202ENST00000409251 Q8IYB0 196 aa10.53□□□□□ -0.72
PTPRN-202ENST00000409251 TXNDC17Q9BRA2 123 aa10.53□□□□□ -0.72
PTPRN-202ENST00000409251 SPCS1Q9Y6A9 102 aa10.53□□□□□ -0.72
PTPRN-202ENST00000409251 IGKV1OR2-108A0A075B7D4 117 aa10.52□□□□□ -0.72
PTPRN-202ENST00000409251 C2orf70A6NJV1 201 aa10.52□□□□□ -0.72
PTPRN-202ENST00000409251 HLA-DRB1P01911 266 aa10.52□□□□□ -0.72
PTPRN-202ENST00000409251 APOHP02749 345 aaPredicted RBP10.52□□□□□ -0.72
PTPRN-202ENST00000409251 AREGP15514 252 aa10.52□□□□□ -0.72
PTPRN-202ENST00000409251 GUSBP1Q15486 140 aa10.52□□□□□ -0.72
PTPRN-202ENST00000409251 SAMD13Q5VXD3 122 aa10.52□□□□□ -0.72
PTPRN-202ENST00000409251 LINC00596Q86U02 117 aa10.52□□□□□ -0.72
PTPRN-202ENST00000409251 OR4A5Q8NH83 315 aa10.52□□□□□ -0.72
PTPRN-202ENST00000409251 TTTY13Q9BZ97 58 aa10.52□□□□□ -0.72
PTPRN-202ENST00000409251 PROP1O75360 226 aa10.52□□□□□ -0.73
PTPRN-202ENST00000409251 IGFL2Q6UWQ7 119 aa10.52□□□□□ -0.73
PTPRN-202ENST00000409251 CLUHP3Q96NS8 147 aa10.52□□□□□ -0.73
PTPRN-202ENST00000409251 PKIBQ9C010 78 aa10.52□□□□□ -0.73
PTPRN-202ENST00000409251 CRYBG3Q68DQ2 2970 aa10.52□□□□□ -0.73
PTPRN-202ENST00000409251 PRDX2P32119 198 aa10.52□□□□□ -0.73
PTPRN-202ENST00000409251 SMIM21Q3B7S5 101 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms